RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 ATG3Q9NT62 314 aa18.85■□□□□ 0.61
PHTF1-201ENST00000357783 IFIT1P09914 478 aaKnown RBP18.85■□□□□ 0.61
PHTF1-201ENST00000357783 UBE2HP62256 183 aa18.85■□□□□ 0.61
PHTF1-201ENST00000357783 PHF14O94880 888 aa18.84■□□□□ 0.61
PHTF1-201ENST00000357783 CEP126Q9P2H0 1117 aa18.84■□□□□ 0.61
PHTF1-201ENST00000357783 CDC37L1Q7L3B6 337 aa18.84■□□□□ 0.61
PHTF1-201ENST00000357783 STARD3NLO95772 234 aa18.83■□□□□ 0.61
PHTF1-201ENST00000357783 FERMT3Q86UX7 667 aa18.83■□□□□ 0.61
PHTF1-201ENST00000357783 TEX13AQ9BXU3 409 aaPredicted RBP18.83■□□□□ 0.6
PHTF1-201ENST00000357783 CCDC183Q5T5S1 534 aa18.82■□□□□ 0.6
PHTF1-201ENST00000357783 Q6ZUG5 572 aa18.82■□□□□ 0.6
PHTF1-201ENST00000357783 VSIG10Q8N0Z9 540 aa18.82■□□□□ 0.6
PHTF1-201ENST00000357783 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
PHTF1-201ENST00000357783 HELLSQ9NRZ9 838 aa18.82■□□□□ 0.6
PHTF1-201ENST00000357783 PCCAP05165 728 aaPredicted RBP18.82■□□□□ 0.6
PHTF1-201ENST00000357783 HSP90B1P14625 803 aaKnown RBP18.82■□□□□ 0.6
PHTF1-201ENST00000357783 GPTP24298 496 aa18.82■□□□□ 0.6
PHTF1-201ENST00000357783 TAF7LQ5H9L4 462 aa18.82■□□□□ 0.6
PHTF1-201ENST00000357783 PDCP20941 246 aa18.81■□□□□ 0.6
PHTF1-201ENST00000357783 ADORA1P30542 326 aa18.81■□□□□ 0.6
PHTF1-201ENST00000357783 TRIM28Q13263 835 aaKnown RBP18.81■□□□□ 0.6
PHTF1-201ENST00000357783 ZMYM1Q5SVZ6 1142 aa18.81■□□□□ 0.6
PHTF1-201ENST00000357783 STOX1Q6ZVD7 989 aa18.81■□□□□ 0.6
PHTF1-201ENST00000357783 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
PHTF1-201ENST00000357783 LAMA4Q16363 1823 aa18.81■□□□□ 0.6
PHTF1-201ENST00000357783 CSPP1Q1MSJ5 1256 aa18.81■□□□□ 0.6
PHTF1-201ENST00000357783 GORABQ5T7V8 394 aa18.81■□□□□ 0.6
PHTF1-201ENST00000357783 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.81■□□□□ 0.6
PHTF1-201ENST00000357783 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
PHTF1-201ENST00000357783 HLFQ16534 295 aa18.8■□□□□ 0.6
PHTF1-201ENST00000357783 PDLIM2Q96JY6 352 aa18.8■□□□□ 0.6
PHTF1-201ENST00000357783 MAST3O60307 1309 aa18.8■□□□□ 0.6
PHTF1-201ENST00000357783 MAP3K15Q6ZN16 1313 aa18.8■□□□□ 0.6
PHTF1-201ENST00000357783 FAM173BQ6P4H8 233 aa18.8■□□□□ 0.6
PHTF1-201ENST00000357783 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
PHTF1-201ENST00000357783 GTF3C6Q969F1 213 aa18.8■□□□□ 0.6
PHTF1-201ENST00000357783 RNF113AO15541 343 aaKnown RBP18.8■□□□□ 0.6
PHTF1-201ENST00000357783 JAK2O60674 1132 aa18.8■□□□□ 0.6
PHTF1-201ENST00000357783 FGD1P98174 961 aa18.8■□□□□ 0.6
PHTF1-201ENST00000357783 SYTL4Q96C24 671 aaPredicted RBP18.8■□□□□ 0.6
PHTF1-201ENST00000357783 IFIT5Q13325 482 aaKnown RBP18.79■□□□□ 0.6
PHTF1-201ENST00000357783 TTC39AQ5SRH9 613 aa18.79■□□□□ 0.6
PHTF1-201ENST00000357783 BRF1Q92994 677 aa18.79■□□□□ 0.6
PHTF1-201ENST00000357783 XAGE2Q96GT9 111 aa18.79■□□□□ 0.6
PHTF1-201ENST00000357783 A0A0G2JLW4 131 aa18.79■□□□□ 0.6
PHTF1-201ENST00000357783 GIGYF2Q6Y7W6 1299 aaKnown RBP18.79■□□□□ 0.6
PHTF1-201ENST00000357783 SLC4A9Q96Q91 983 aa18.79■□□□□ 0.6
PHTF1-201ENST00000357783 DSCC1Q9BVC3 393 aa18.79■□□□□ 0.6
PHTF1-201ENST00000357783 SPEF2Q9C093 1822 aa18.78■□□□□ 0.6
PHTF1-201ENST00000357783 HSPD1P10809 573 aaKnown RBP18.78■□□□□ 0.6
PHTF1-201ENST00000357783 CCDC158Q5M9N0 1113 aa18.78■□□□□ 0.6
PHTF1-201ENST00000357783 AKAP2Q9Y2D5 859 aa18.78■□□□□ 0.6
PHTF1-201ENST00000357783 M0R2C6 588 aa18.78■□□□□ 0.6
PHTF1-201ENST00000357783 KRT85P78386 507 aa18.78■□□□□ 0.6
PHTF1-201ENST00000357783 ZSCAN30Q86W11 494 aa18.78■□□□□ 0.6
PHTF1-201ENST00000357783 PLA2G12BQ9BX93 195 aa18.78■□□□□ 0.6
PHTF1-201ENST00000357783 DISP2A7MBM2 1401 aa18.78■□□□□ 0.6
PHTF1-201ENST00000357783 BCL9O00512 1426 aa18.77■□□□□ 0.6
PHTF1-201ENST00000357783 CSF1RP07333 972 aa18.77■□□□□ 0.59
PHTF1-201ENST00000357783 NLRP10Q86W26 655 aa18.77■□□□□ 0.59
PHTF1-201ENST00000357783 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.77■□□□□ 0.59
PHTF1-201ENST00000357783 CYP19A1P11511 503 aaPredicted RBP18.76■□□□□ 0.59
PHTF1-201ENST00000357783 PDIA4P13667 645 aaKnown RBP18.76■□□□□ 0.59
PHTF1-201ENST00000357783 TTC6Q86TZ1 520 aa18.76■□□□□ 0.59
PHTF1-201ENST00000357783 FBXO3Q9UK99 471 aa18.76■□□□□ 0.59
PHTF1-201ENST00000357783 ZBTB1Q9Y2K1 713 aa18.76■□□□□ 0.59
PHTF1-201ENST00000357783 COL14A1Q05707 1796 aaKnown RBP18.76■□□□□ 0.59
PHTF1-201ENST00000357783 SCARF1Q14162 830 aa18.76■□□□□ 0.59
PHTF1-201ENST00000357783 DHX32Q7L7V1 743 aaKnown RBP18.76■□□□□ 0.59
PHTF1-201ENST00000357783 OSBP2Q969R2 916 aa18.76■□□□□ 0.59
PHTF1-201ENST00000357783 DDX11Q96FC9 970 aa18.76■□□□□ 0.59
PHTF1-201ENST00000357783 HMGB1P09429 215 aaKnown RBP18.75■□□□□ 0.59
PHTF1-201ENST00000357783 GREM2Q9H772 168 aa18.75■□□□□ 0.59
PHTF1-201ENST00000357783 RIC1Q4ADV7 1423 aa18.75■□□□□ 0.59
PHTF1-201ENST00000357783 LRP6O75581 1613 aa18.75■□□□□ 0.59
PHTF1-201ENST00000357783 SCRN1Q12765 414 aa18.75■□□□□ 0.59
PHTF1-201ENST00000357783 LETM1O95202 739 aaPredicted RBP18.74■□□□□ 0.59
PHTF1-201ENST00000357783 WASHC4Q2M389 1173 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 METTL24Q5JXM2 366 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 TTLL5Q6EMB2 1281 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 GIMAP6Q6P9H5 292 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 TICAM2Q86XR7 235 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 E7EWF7 191 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 EXOC5O00471 708 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 ITGA6P23229 1130 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 APOBRQ0VD83 1088 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 PI16Q6UXB8 463 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
PHTF1-201ENST00000357783 MSNP26038 577 aaKnown RBP18.73■□□□□ 0.59
PHTF1-201ENST00000357783 ZAP70P43403 619 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 ATP2B3Q16720 1220 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 LDHAL6AQ6ZMR3 332 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 TTLL11Q8NHH1 800 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 ANKRD36CQ5JPF3 1778 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 MYH3P11055 1940 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 HS1BP3Q53T59 392 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 TFIP11Q9UBB9 837 aaKnown RBP18.73■□□□□ 0.59
PHTF1-201ENST00000357783 TBC1D2BQ9UPU7 963 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 HCLS1P14317 486 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms