RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 TBC1D2BQ9UPU7 963 aa31.23■■■□□ 2.59
C1orf228-201ENST00000357508 NHSQ6T4R5 1651 aa31.23■■■□□ 2.59
C1orf228-201ENST00000357508 USPL1Q5W0Q7 1092 aa31.22■■■□□ 2.59
C1orf228-201ENST00000357508 GOLIM4O00461 696 aa31.22■■■□□ 2.59
C1orf228-201ENST00000357508 LMBRD1Q9NUN5 540 aa31.22■■■□□ 2.59
C1orf228-201ENST00000357508 GOLGA6L3A6NEY3 463 aa31.21■■■□□ 2.59
C1orf228-201ENST00000357508 SH3TC1Q8TE82 1336 aa31.21■■■□□ 2.59
C1orf228-201ENST00000357508 HMG20BQ9P0W2 317 aa31.21■■■□□ 2.59
C1orf228-201ENST00000357508 MYH14Q7Z406 1995 aaKnown RBP31.21■■■□□ 2.59
C1orf228-201ENST00000357508 PSMA5P28066 241 aa31.21■■■□□ 2.59
C1orf228-201ENST00000357508 KLHL40Q2TBA0 621 aa31.21■■■□□ 2.59
C1orf228-201ENST00000357508 MCMDC2Q4G0Z9 681 aa31.21■■■□□ 2.59
C1orf228-201ENST00000357508 TAF7LQ5H9L4 462 aa31.21■■■□□ 2.59
C1orf228-201ENST00000357508 TICAM2Q86XR7 235 aa31.21■■■□□ 2.59
C1orf228-201ENST00000357508 TTLL11Q8NHH1 800 aa31.21■■■□□ 2.59
C1orf228-201ENST00000357508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.21■■■□□ 2.59
C1orf228-201ENST00000357508 SEC62Q99442 399 aaKnown RBP31.21■■■□□ 2.59
C1orf228-201ENST00000357508 RIC1Q4ADV7 1423 aa31.2■■■□□ 2.59
C1orf228-201ENST00000357508 IFIT1P09914 478 aaKnown RBP31.2■■■□□ 2.59
C1orf228-201ENST00000357508 TSGA10IPQ3SY00 556 aa31.2■■■□□ 2.59
C1orf228-201ENST00000357508 INTS5Q6P9B9 1019 aaKnown RBP31.2■■■□□ 2.59
C1orf228-201ENST00000357508 KRT27Q7Z3Y8 459 aa31.2■■■□□ 2.59
C1orf228-201ENST00000357508 AKAP2Q9Y2D5 859 aa31.2■■■□□ 2.59
C1orf228-201ENST00000357508 LARGE1O95461 756 aa31.19■■■□□ 2.58
C1orf228-201ENST00000357508 EIF5P55010 431 aaKnown RBP31.19■■■□□ 2.58
C1orf228-201ENST00000357508 CTSWP56202 376 aa31.19■■■□□ 2.58
C1orf228-201ENST00000357508 FOXD4L5Q5VV16 416 aaPredicted RBP31.19■■■□□ 2.58
C1orf228-201ENST00000357508 CCDC129Q6ZRS4 1044 aa31.19■■■□□ 2.58
C1orf228-201ENST00000357508 FOXD4L4Q8WXT5 416 aaPredicted RBP31.19■■■□□ 2.58
C1orf228-201ENST00000357508 UBN2Q6ZU65 1347 aa31.19■■■□□ 2.58
C1orf228-201ENST00000357508 TRMT112Q9UI30 125 aaKnown RBP31.19■■■□□ 2.58
C1orf228-201ENST00000357508 TAF6LQ9Y6J9 622 aa31.19■■■□□ 2.58
C1orf228-201ENST00000357508 DDX49Q9Y6V7 483 aaKnown RBP31.19■■■□□ 2.58
C1orf228-201ENST00000357508 BTAF1O14981 1849 aa31.19■■■□□ 2.58
C1orf228-201ENST00000357508 IRS4O14654 1257 aaPredicted RBP31.18■■■□□ 2.58
C1orf228-201ENST00000357508 ZNF34Q8IZ26 560 aa31.18■■■□□ 2.58
C1orf228-201ENST00000357508 GREM2Q9H772 168 aa31.18■■■□□ 2.58
C1orf228-201ENST00000357508 CCDC87Q9NVE4 849 aa31.18■■■□□ 2.58
C1orf228-201ENST00000357508 BRWD3Q6RI45 1802 aa31.18■■■□□ 2.58
C1orf228-201ENST00000357508 ZSCAN31Q96LW9 406 aaPredicted RBP31.18■■■□□ 2.58
C1orf228-201ENST00000357508 SBF2Q86WG5 1849 aa31.17■■■□□ 2.58
C1orf228-201ENST00000357508 ITGA6P23229 1130 aa31.17■■■□□ 2.58
C1orf228-201ENST00000357508 CRKLP46109 303 aaKnown RBP31.17■■■□□ 2.58
C1orf228-201ENST00000357508 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.17■■■□□ 2.58
C1orf228-201ENST00000357508 COL9A3Q14050 684 aaPredicted RBP31.16■■■□□ 2.58
C1orf228-201ENST00000357508 BRPF3Q9ULD4 1205 aa31.16■■■□□ 2.58
C1orf228-201ENST00000357508 ADORA1P30542 326 aa31.16■■■□□ 2.58
C1orf228-201ENST00000357508 KCNQ4P56696 695 aa31.16■■■□□ 2.58
C1orf228-201ENST00000357508 XAGE2Q96GT9 111 aa31.16■■■□□ 2.58
C1orf228-201ENST00000357508 CHAMP1Q96JM3 812 aa31.16■■■□□ 2.58
C1orf228-201ENST00000357508 SH2B1Q9NRF2 756 aaPredicted RBP31.16■■■□□ 2.58
C1orf228-201ENST00000357508 COL5A3P25940 1745 aaPredicted RBP31.15■■■□□ 2.58
C1orf228-201ENST00000357508 BLOC1S2Q6QNY1 142 aa31.15■■■□□ 2.58
C1orf228-201ENST00000357508 HELLSQ9NRZ9 838 aa31.15■■■□□ 2.58
C1orf228-201ENST00000357508 RIPOR2Q9Y4F9 1068 aa31.15■■■□□ 2.58
C1orf228-201ENST00000357508 U3KPZ7 1027 aaPredicted RBP31.15■■■□□ 2.58
C1orf228-201ENST00000357508 MYH7P12883 1935 aa31.14■■■□□ 2.58
C1orf228-201ENST00000357508 WDR33Q9C0J8 1336 aaKnown RBP31.14■■■□□ 2.58
C1orf228-201ENST00000357508 ANKRD18BA2A2Z9 1011 aa31.14■■■□□ 2.58
C1orf228-201ENST00000357508 PDE8AO60658 829 aa31.14■■■□□ 2.58
C1orf228-201ENST00000357508 CCDC158Q5M9N0 1113 aa31.14■■■□□ 2.58
C1orf228-201ENST00000357508 RGS17Q9UGC6 210 aaPredicted RBP31.14■■■□□ 2.58
C1orf228-201ENST00000357508 LAMA4Q16363 1823 aa31.14■■■□□ 2.57
C1orf228-201ENST00000357508 RPS6KB1P23443 525 aa31.13■■■□□ 2.57
C1orf228-201ENST00000357508 ZMYM1Q5SVZ6 1142 aa31.13■■■□□ 2.57
C1orf228-201ENST00000357508 LRP5O75197 1615 aa31.13■■■□□ 2.57
C1orf228-201ENST00000357508 FAM196AQ6ZSG2 479 aa31.13■■■□□ 2.57
C1orf228-201ENST00000357508 ALDH8A1Q9H2A2 487 aaPredicted RBP31.13■■■□□ 2.57
C1orf228-201ENST00000357508 PRPF40AO75400 957 aaKnown RBP31.12■■■□□ 2.57
C1orf228-201ENST00000357508 TTC39AQ5SRH9 613 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 LDHAL6AQ6ZMR3 332 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 CCDC83Q8IWF9 413 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 BCL11BQ9C0K0 894 aaPredicted RBP31.12■■■□□ 2.57
C1orf228-201ENST00000357508 ISY1Q9ULR0 285 aaKnown RBP31.12■■■□□ 2.57
C1orf228-201ENST00000357508 TCHHQ07283 1943 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 AKAP11Q9UKA4 1901 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 ZNF831Q5JPB2 1677 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 KRT32Q14532 448 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 ME3Q16798 604 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 SLFNL1Q499Z3 407 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 GORABQ5T7V8 394 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 LINC00116Q8NCU8 138 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 SMC3Q9UQE7 1217 aa31.12■■■□□ 2.57
C1orf228-201ENST00000357508 EP400Q96L91 3159 aa31.11■■■□□ 2.57
C1orf228-201ENST00000357508 RXRBP28702 533 aa31.11■■■□□ 2.57
C1orf228-201ENST00000357508 ST3GAL1Q11201 340 aa31.11■■■□□ 2.57
C1orf228-201ENST00000357508 DDX60Q8IY21 1712 aaKnown RBP31.11■■■□□ 2.57
C1orf228-201ENST00000357508 METTL24Q5JXM2 366 aa31.1■■■□□ 2.57
C1orf228-201ENST00000357508 TPCN1Q9ULQ1 816 aa31.1■■■□□ 2.57
C1orf228-201ENST00000357508 XRCC6P12956 609 aaKnown RBP eCLIP31.1■■■□□ 2.57
C1orf228-201ENST00000357508 RNF113AO15541 343 aaKnown RBP31.09■■■□□ 2.57
C1orf228-201ENST00000357508 ATP2B3Q16720 1220 aa31.09■■■□□ 2.57
C1orf228-201ENST00000357508 LAMB2P55268 1798 aa31.09■■■□□ 2.57
C1orf228-201ENST00000357508 BCORQ6W2J9 1755 aa31.09■■■□□ 2.57
C1orf228-201ENST00000357508 ANKRD1Q15327 319 aa31.09■■■□□ 2.57
C1orf228-201ENST00000357508 ABCC12Q96J65 1359 aa31.08■■■□□ 2.57
C1orf228-201ENST00000357508 CYP21A2P08686 494 aa31.08■■■□□ 2.57
C1orf228-201ENST00000357508 CNNM1Q9NRU3 951 aa31.08■■■□□ 2.57
C1orf228-201ENST00000357508 CAMTA2O94983 1202 aa31.07■■■□□ 2.56
C1orf228-201ENST00000357508 FKBP4Q02790 459 aaKnown RBP eCLIP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms