RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SDSP20132 328 aa22.23■■□□□ 1.15
SMARCD3-202ENST00000356800 IGHMBP2P38935 993 aaKnown RBP22.23■■□□□ 1.15
SMARCD3-202ENST00000356800 TIMM10P62072 90 aa22.23■■□□□ 1.15
SMARCD3-202ENST00000356800 CELF1Q92879 486 aaKnown RBP22.23■■□□□ 1.15
SMARCD3-202ENST00000356800 MPHOSPH8Q99549 860 aa22.23■■□□□ 1.15
SMARCD3-202ENST00000356800 DBNDD2Q9BQY9 259 aa22.23■■□□□ 1.15
SMARCD3-202ENST00000356800 ECHDC1Q9NTX5 307 aa22.23■■□□□ 1.15
SMARCD3-202ENST00000356800 AK9Q5TCS8 1911 aa22.23■■□□□ 1.15
SMARCD3-202ENST00000356800 CRY2Q49AN0 593 aa22.22■■□□□ 1.15
SMARCD3-202ENST00000356800 ANKRD18AQ8IVF6 992 aa22.22■■□□□ 1.15
SMARCD3-202ENST00000356800 PARP3Q9Y6F1 533 aa22.22■■□□□ 1.15
SMARCD3-202ENST00000356800 MROH5Q6ZUA9 1318 aa22.22■■□□□ 1.15
SMARCD3-202ENST00000356800 A0A1B0GUL7 405 aa22.21■■□□□ 1.15
SMARCD3-202ENST00000356800 GPATCH3Q96I76 525 aa22.21■■□□□ 1.15
SMARCD3-202ENST00000356800 PDE8BO95263 885 aa22.2■■□□□ 1.15
SMARCD3-202ENST00000356800 HELBQ8NG08 1087 aaPredicted RBP22.2■■□□□ 1.15
SMARCD3-202ENST00000356800 NEUROD6Q96NK8 337 aa22.2■■□□□ 1.15
SMARCD3-202ENST00000356800 AKAP2Q9Y2D5 859 aa22.2■■□□□ 1.15
SMARCD3-202ENST00000356800 ARAP2Q8WZ64 1704 aa22.2■■□□□ 1.14
SMARCD3-202ENST00000356800 KLRG2A4D1S0 409 aaPredicted RBP22.2■■□□□ 1.14
SMARCD3-202ENST00000356800 GLRX3O76003 335 aaKnown RBP22.2■■□□□ 1.14
SMARCD3-202ENST00000356800 RPS8P62241 208 aaKnown RBP22.2■■□□□ 1.14
SMARCD3-202ENST00000356800 DDX46Q7L014 1031 aaKnown RBP22.2■■□□□ 1.14
SMARCD3-202ENST00000356800 BSDC1Q9NW68 430 aaPredicted RBP22.2■■□□□ 1.14
SMARCD3-202ENST00000356800 COL11A2P13942 1736 aaPredicted RBP22.18■■□□□ 1.14
SMARCD3-202ENST00000356800 ERC2O15083 957 aa22.18■■□□□ 1.14
SMARCD3-202ENST00000356800 SEC24BO95487 1268 aa22.18■■□□□ 1.14
SMARCD3-202ENST00000356800 ADORA1P30542 326 aa22.18■■□□□ 1.14
SMARCD3-202ENST00000356800 ATP2B3Q16720 1220 aa22.18■■□□□ 1.14
SMARCD3-202ENST00000356800 BRIP1Q9BX63 1249 aa22.18■■□□□ 1.14
SMARCD3-202ENST00000356800 TAF5LO75529 589 aa22.17■■□□□ 1.14
SMARCD3-202ENST00000356800 MAP4K4O95819 1239 aaPredicted RBP22.17■■□□□ 1.14
SMARCD3-202ENST00000356800 FGFR2P21802 821 aa22.17■■□□□ 1.14
SMARCD3-202ENST00000356800 CHRNDQ07001 517 aa22.17■■□□□ 1.14
SMARCD3-202ENST00000356800 TBC1D9Q6ZT07 1266 aa22.17■■□□□ 1.14
SMARCD3-202ENST00000356800 RPGRQ92834 1020 aaKnown RBP22.17■■□□□ 1.14
SMARCD3-202ENST00000356800 XAGE2Q96GT9 111 aa22.17■■□□□ 1.14
SMARCD3-202ENST00000356800 MINPP1Q9UNW1 487 aa22.17■■□□□ 1.14
SMARCD3-202ENST00000356800 SNAP23O00161 211 aa22.16■■□□□ 1.14
SMARCD3-202ENST00000356800 CDC45O75419 566 aa22.16■■□□□ 1.14
SMARCD3-202ENST00000356800 ATP5JP18859 108 aa22.16■■□□□ 1.14
SMARCD3-202ENST00000356800 GRAPQ13588 217 aa22.16■■□□□ 1.14
SMARCD3-202ENST00000356800 GRAPLQ8TC17 118 aaPredicted RBP22.16■■□□□ 1.14
SMARCD3-202ENST00000356800 TRIM6-TRIM34B2RNG4 842 aa22.15■■□□□ 1.14
SMARCD3-202ENST00000356800 HOXA10P31260 410 aaPredicted RBP22.15■■□□□ 1.14
SMARCD3-202ENST00000356800 PUM3Q15397 648 aaKnown RBP22.15■■□□□ 1.14
SMARCD3-202ENST00000356800 BOLA2Q9H3K6 86 aa22.15■■□□□ 1.14
SMARCD3-202ENST00000356800 SLC51AQ86UW1 340 aa22.14■■□□□ 1.14
SMARCD3-202ENST00000356800 SLC16A10Q8TF71 515 aa22.14■■□□□ 1.14
SMARCD3-202ENST00000356800 RILPL2Q969X0 211 aa22.14■■□□□ 1.14
SMARCD3-202ENST00000356800 RBM17Q96I25 401 aaKnown RBP22.14■■□□□ 1.13
SMARCD3-202ENST00000356800 LPIN2Q92539 896 aa22.13■■□□□ 1.13
SMARCD3-202ENST00000356800 WTIPA6NIX2 430 aaPredicted RBP22.12■■□□□ 1.13
SMARCD3-202ENST00000356800 AKAP11Q9UKA4 1901 aa22.12■■□□□ 1.13
SMARCD3-202ENST00000356800 SRGNP10124 158 aa22.11■■□□□ 1.13
SMARCD3-202ENST00000356800 CRAMP1Q96RY5 1269 aa22.11■■□□□ 1.13
SMARCD3-202ENST00000356800 PDE6BP35913 854 aa22.11■■□□□ 1.13
SMARCD3-202ENST00000356800 CNTROBQ8N137 903 aa22.11■■□□□ 1.13
SMARCD3-202ENST00000356800 HAUS7Q99871 368 aa22.11■■□□□ 1.13
SMARCD3-202ENST00000356800 NDUFB9Q9Y6M9 179 aa22.11■■□□□ 1.13
SMARCD3-202ENST00000356800 SLC5A1P13866 664 aa22.1■■□□□ 1.13
SMARCD3-202ENST00000356800 GORABQ5T7V8 394 aa22.1■■□□□ 1.13
SMARCD3-202ENST00000356800 EDC3Q96F86 508 aaKnown RBP22.1■■□□□ 1.13
SMARCD3-202ENST00000356800 LRRC37AA6NMS7 1700 aa22.09■■□□□ 1.13
SMARCD3-202ENST00000356800 CACNA1SQ13698 1873 aa22.09■■□□□ 1.13
SMARCD3-202ENST00000356800 R3HDM1Q15032 1099 aaKnown RBP22.09■■□□□ 1.13
SMARCD3-202ENST00000356800 CCDC158Q5M9N0 1113 aa22.09■■□□□ 1.13
SMARCD3-202ENST00000356800 NPR1P16066 1061 aa22.08■■□□□ 1.13
SMARCD3-202ENST00000356800 CHMLP26374 656 aa22.08■■□□□ 1.13
SMARCD3-202ENST00000356800 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMARCD3-202ENST00000356800 EVI5LQ96CN4 794 aa22.08■■□□□ 1.13
SMARCD3-202ENST00000356800 BBOX1O75936 387 aa22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 ZBTB7AO95365 584 aa22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 IFIT1P09914 478 aaKnown RBP22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 PHKA1P46020 1223 aa22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 UBE4AQ14139 1066 aa22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 SCARF1Q14162 830 aa22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 TTC39AQ5SRH9 613 aa22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 ANKRD2Q9GZV1 360 aa22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 UPF2Q9HAU5 1272 aaKnown RBP22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 EIF5BO60841 1220 aaKnown RBP22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 CCDC102BQ68D86 513 aa22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 DNAJC2Q99543 621 aaKnown RBP22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 C10orf71Q711Q0 1435 aa22.07■■□□□ 1.12
SMARCD3-202ENST00000356800 C2CD5Q86YS7 1000 aa22.06■■□□□ 1.12
SMARCD3-202ENST00000356800 ZNF512BQ96KM6 892 aaPredicted RBP22.06■■□□□ 1.12
SMARCD3-202ENST00000356800 KIF13BQ9NQT8 1826 aa22.06■■□□□ 1.12
SMARCD3-202ENST00000356800 LTBP1Q14766 1721 aa22.05■■□□□ 1.12
SMARCD3-202ENST00000356800 ANP32AP39687 249 aaKnown RBP22.05■■□□□ 1.12
SMARCD3-202ENST00000356800 MFAP1P55081 439 aaKnown RBP22.05■■□□□ 1.12
SMARCD3-202ENST00000356800 MASTLQ96GX5 879 aa22.05■■□□□ 1.12
SMARCD3-202ENST00000356800 ARID4AP29374 1257 aaPredicted RBP22.04■■□□□ 1.12
SMARCD3-202ENST00000356800 MCAMP43121 646 aa22.04■■□□□ 1.12
SMARCD3-202ENST00000356800 ILDR2Q71H61 639 aa22.04■■□□□ 1.12
SMARCD3-202ENST00000356800 DLEC1Q9Y238 1755 aa22.04■■□□□ 1.12
SMARCD3-202ENST00000356800 KLRK1P26718 216 aa22.04■■□□□ 1.12
SMARCD3-202ENST00000356800 BCAMP50895 628 aa22.04■■□□□ 1.12
SMARCD3-202ENST00000356800 CASC1Q6TDU7 716 aa22.04■■□□□ 1.12
SMARCD3-202ENST00000356800 PI16Q6UXB8 463 aa22.04■■□□□ 1.12
SMARCD3-202ENST00000356800 MTFR1LQ9H019 292 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms