RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 TOM1L2Q6ZVM7 507 aa9.75□□□□□ -0.85
COMMD9-202ENST00000355500 PMM1Q92871 262 aa9.75□□□□□ -0.85
COMMD9-202ENST00000355500 STK32BQ9NY57 414 aa9.75□□□□□ -0.85
COMMD9-202ENST00000355500 KIAA1522Q9P206 1035 aaPredicted RBP9.75□□□□□ -0.85
COMMD9-202ENST00000355500 KCPQ6ZWJ8 1503 aa9.75□□□□□ -0.85
COMMD9-202ENST00000355500 ERC1Q8IUD2 1116 aa9.75□□□□□ -0.85
COMMD9-202ENST00000355500 BANK1Q8NDB2 785 aa9.75□□□□□ -0.85
COMMD9-202ENST00000355500 ITGB4P16144 1822 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 TTC41PQ6P2S7 1318 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 MCCD1P59942 119 aaPredicted RBP9.74□□□□□ -0.85
COMMD9-202ENST00000355500 SETDB1Q15047 1291 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 SLC15A2Q16348 729 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 GPATCH3Q96I76 525 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 GEMIN8Q9NWZ8 242 aaKnown RBP9.74□□□□□ -0.85
COMMD9-202ENST00000355500 A0A0G2JS52 829 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 F6X3S4 739 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 SLC4A10Q6U841 1118 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 CLEC17AQ6ZS10 378 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 SMAP1Q8IYB5 467 aaPredicted RBP9.74□□□□□ -0.85
COMMD9-202ENST00000355500 LINS1Q8NG48 757 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 PIK3R5Q8WYR1 880 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 KIF1BPQ96EK5 621 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 CHPF2Q9P2E5 772 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 FRMD4BQ9Y2L6 1034 aa9.74□□□□□ -0.85
COMMD9-202ENST00000355500 PCDH11XQ9BZA7 1347 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 PCDH11YQ9BZA8 1340 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 SDSP20132 328 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 MX1P20591 662 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 PTGER2P43116 358 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 USP26Q9BXU7 913 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 UBA5Q9GZZ9 404 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 TJP1Q07157 1748 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 TOGARAM1Q9Y4F4 1720 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 ERC2O15083 957 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 CALRP27797 417 aaKnown RBP9.73□□□□□ -0.85
COMMD9-202ENST00000355500 ZNF790Q6PG37 636 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 LRRFIP2Q9Y608 721 aaKnown RBP9.73□□□□□ -0.85
COMMD9-202ENST00000355500 RFX7Q2KHR2 1363 aa9.73□□□□□ -0.85
COMMD9-202ENST00000355500 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 SSR1P43307 286 aaKnown RBP9.72□□□□□ -0.85
COMMD9-202ENST00000355500 MCM2P49736 904 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 APLP1P51693 650 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 MPRIPQ6WCQ1 1025 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 FLAD1Q8NFF5 587 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 AKT1S1Q96B36 256 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
COMMD9-202ENST00000355500 UBR3Q6ZT12 1888 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 SPEF2Q9C093 1822 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
COMMD9-202ENST00000355500 TXNRD1Q16881 649 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 MKL1Q969V6 931 aa9.72□□□□□ -0.85
COMMD9-202ENST00000355500 PARNO95453 639 aaKnown RBP9.71□□□□□ -0.85
COMMD9-202ENST00000355500 MKRN4PQ13434 485 aaPredicted RBP9.71□□□□□ -0.85
COMMD9-202ENST00000355500 TMX4Q9H1E5 349 aaPredicted RBP9.71□□□□□ -0.85
COMMD9-202ENST00000355500 PHAXQ9H814 394 aaKnown RBP9.71□□□□□ -0.85
COMMD9-202ENST00000355500 ARHGEF10LQ9HCE6 1279 aa9.71□□□□□ -0.85
COMMD9-202ENST00000355500 RAI14Q9P0K7 980 aa9.71□□□□□ -0.85
COMMD9-202ENST00000355500 PNMA6EA0A0J9YXQ4 647 aa9.71□□□□□ -0.86
COMMD9-202ENST00000355500 PDIA6Q15084 440 aa9.71□□□□□ -0.86
COMMD9-202ENST00000355500 YY1AP1Q9H869 796 aa9.71□□□□□ -0.86
COMMD9-202ENST00000355500 COL5A3P25940 1745 aaPredicted RBP9.71□□□□□ -0.86
COMMD9-202ENST00000355500 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 SNRPA1P09661 255 aaKnown RBP9.7□□□□□ -0.86
COMMD9-202ENST00000355500 TAF3Q5VWG9 929 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 CACTIN-AS1Q8N1I8 211 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
COMMD9-202ENST00000355500 FMNL2Q96PY5 1086 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 SPOCK3Q9BQ16 436 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 MAF1Q9H063 256 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 ISY1Q9ULR0 285 aaKnown RBP9.7□□□□□ -0.86
COMMD9-202ENST00000355500 PI4KAP2A4QPH2 592 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 UTP14CQ5TAP6 766 aaKnown RBP9.7□□□□□ -0.86
COMMD9-202ENST00000355500 WDR78Q5VTH9 848 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 LRP10Q7Z4F1 713 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 PI4KAP1Q8N8J0 262 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 GABBR1Q9UBS5 961 aa9.7□□□□□ -0.86
COMMD9-202ENST00000355500 PSDA5PKW4 1024 aaPredicted RBP9.69□□□□□ -0.86
COMMD9-202ENST00000355500 SATB1Q01826 763 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 KCNA1Q09470 495 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 C4BP0C0L5 1744 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 EP400Q96L91 3159 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 SLC4A3P48751 1232 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 TDO2P48775 406 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 GSE1Q14687 1217 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 PPP1R42Q7Z4L9 355 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 RHPN1Q8TCX5 695 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 RNF25Q96BH1 459 aaPredicted RBP9.69□□□□□ -0.86
COMMD9-202ENST00000355500 METTL14Q9HCE5 456 aaKnown RBP9.69□□□□□ -0.86
COMMD9-202ENST00000355500 NLRP2Q9NX02 1062 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 ANKRD36CQ5JPF3 1778 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 KCNQ3O43525 872 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 BDNFP23560 247 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 ZKSCAN8Q15776 578 aaPredicted RBP9.69□□□□□ -0.86
COMMD9-202ENST00000355500 PUS10Q3MIT2 529 aaKnown RBP9.69□□□□□ -0.86
COMMD9-202ENST00000355500 ESYT1Q9BSJ8 1104 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 SNRKQ9NRH2 765 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 MAGEC2Q9UBF1 373 aaPredicted RBP9.69□□□□□ -0.86
COMMD9-202ENST00000355500 MRVI1Q9Y6F6 885 aa9.69□□□□□ -0.86
COMMD9-202ENST00000355500 GRM8O00222 908 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 ST18O60284 1047 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms