RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 FSD1Q9BTV5 496 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 FPGT-TNNI3KV9GXZ4 949 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 ZNF609O15014 1411 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 MYL6BP14649 208 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 PHKG2P15735 406 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 SLC39A6Q13433 755 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 ANO6Q4KMQ2 910 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 MTERF4Q7Z6M4 381 aaKnown RBP11.36□□□□□ -0.59
RPE-201ENST00000354506 GTF3C6Q969F1 213 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 SCAND2PQ9GZW5 306 aaPredicted RBP11.36□□□□□ -0.59
RPE-201ENST00000354506 DNAJC25Q9H1X3 360 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 TRMT1Q9NXH9 659 aaKnown RBP11.36□□□□□ -0.59
RPE-201ENST00000354506 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.591e-7■■□□□ 14.3
RPE-201ENST00000354506 PKD1L3Q7Z443 1732 aa11.36□□□□□ -0.59
RPE-201ENST00000354506 FAM200AQ8TCP9 573 aa11.35□□□□□ -0.59
RPE-201ENST00000354506 LEO1Q8WVC0 666 aaPredicted RBP11.35□□□□□ -0.59
RPE-201ENST00000354506 HSP90B1P14625 803 aaKnown RBP11.35□□□□□ -0.59
RPE-201ENST00000354506 ADD1P35611 737 aaKnown RBP11.35□□□□□ -0.59
RPE-201ENST00000354506 RESTQ13127 1097 aa11.35□□□□□ -0.59
RPE-201ENST00000354506 CHST3Q7LGC8 479 aa11.35□□□□□ -0.59
RPE-201ENST00000354506 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
RPE-201ENST00000354506 PGBD1Q96JS3 809 aa11.35□□□□□ -0.59
RPE-201ENST00000354506 SEC62Q99442 399 aaKnown RBP11.35□□□□□ -0.59
RPE-201ENST00000354506 HAUS7Q99871 368 aa11.35□□□□□ -0.59
RPE-201ENST00000354506 ADAMTSL3P82987 1691 aa11.35□□□□□ -0.59
RPE-201ENST00000354506 TPM3P06753 285 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 FGD1P98174 961 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 TYRO3Q06418 890 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 MAP3K11Q16584 847 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 PTPN21Q16825 1174 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 SMARCC2Q8TAQ2 1214 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 USP16Q9Y5T5 823 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 MEGF6O75095 1541 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 TFCP2Q12800 502 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 KRT32Q14532 448 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 ANKRD13DQ6ZTN6 518 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 FILIP1Q7Z7B0 1213 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 TICAM2Q86XR7 235 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 ZNF496Q96IT1 587 aaPredicted RBP11.34□□□□□ -0.59
RPE-201ENST00000354506 MYD88Q99836 296 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 LAMB4A4D0S4 1761 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 C1orf167Q5SNV9 1468 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 PLA2G4DQ86XP0 818 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 PDCL2Q8N4E4 241 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 AGXT2Q9BYV1 514 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 NUP62CLQ9H1M0 184 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 TNMDQ9H2S6 317 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 CLSTN2Q9H4D0 955 aa11.34□□□□□ -0.59
RPE-201ENST00000354506 CYP21A2P08686 494 aa11.33□□□□□ -0.6
RPE-201ENST00000354506 KRT28Q7Z3Y7 464 aa11.33□□□□□ -0.6
RPE-201ENST00000354506 NEK1Q96PY6 1258 aa11.33□□□□□ -0.6
RPE-201ENST00000354506 DNAJC2Q99543 621 aaKnown RBP11.33□□□□□ -0.6
RPE-201ENST00000354506 CCDC94Q9BW85 323 aaPredicted RBP11.33□□□□□ -0.6
RPE-201ENST00000354506 NR1I2O75469 434 aa11.33□□□□□ -0.6
RPE-201ENST00000354506 FMNL2Q96PY5 1086 aa11.33□□□□□ -0.6
RPE-201ENST00000354506 NUP188Q5SRE5 1749 aa11.33□□□□□ -0.6
RPE-201ENST00000354506 SH3TC1Q8TE82 1336 aa11.33□□□□□ -0.6
RPE-201ENST00000354506 MCMDC2Q4G0Z9 681 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 ISM2Q6H9L7 571 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 STK11IPQ8N1F8 1099 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 PALLDQ8WX93 1383 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 PARP4Q9UKK3 1724 aaKnown RBP11.32□□□□□ -0.6
RPE-201ENST00000354506 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
RPE-201ENST00000354506 FOXO4P98177 505 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 STOX1Q6ZVD7 989 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 SPATA32Q96LK8 384 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 LLPHQ9BRT6 129 aaKnown RBP11.32□□□□□ -0.6
RPE-201ENST00000354506 CBX8Q9HC52 389 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 DDX19AQ9NUU7 478 aaKnown RBP11.32□□□□□ -0.6
RPE-201ENST00000354506 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
RPE-201ENST00000354506 TJP1Q07157 1748 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 CCT2P78371 535 aaKnown RBP11.32□□□□□ -0.6
RPE-201ENST00000354506 EXOSC10Q01780 885 aaKnown RBP11.32□□□□□ -0.6
RPE-201ENST00000354506 SCRN1Q12765 414 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 CHAF1AQ13111 956 aaPredicted RBP11.32□□□□□ -0.6
RPE-201ENST00000354506 Q6ZUG5 572 aa11.32□□□□□ -0.6
RPE-201ENST00000354506 TDRD7Q8NHU6 1098 aaKnown RBP11.32□□□□□ -0.6
RPE-201ENST00000354506 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
RPE-201ENST00000354506 CTDNEP1O95476 244 aa11.31□□□□□ -0.6
RPE-201ENST00000354506 ZSCAN16Q9H4T2 348 aaPredicted RBP11.31□□□□□ -0.6
RPE-201ENST00000354506 SALL1Q9NSC2 1324 aa11.31□□□□□ -0.6
RPE-201ENST00000354506 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
RPE-201ENST00000354506 PFKFB2O60825 505 aa11.31□□□□□ -0.6
RPE-201ENST00000354506 ATG9AQ7Z3C6 839 aa11.31□□□□□ -0.6
RPE-201ENST00000354506 DBNDD2Q9BQY9 259 aa11.31□□□□□ -0.6
RPE-201ENST00000354506 UBR2Q8IWV8 1755 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 H7C1W4 665 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 CCDC144BQ3MJ40 725 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 FBXL16Q8N461 479 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 CYP27B1O15528 508 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 ZSCAN20P17040 1043 aaPredicted RBP11.3□□□□□ -0.6
RPE-201ENST00000354506 TPD52L1Q16890 204 aaPredicted RBP11.3□□□□□ -0.6
RPE-201ENST00000354506 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.3□□□□□ -0.6
RPE-201ENST00000354506 IFNL2Q8IZJ0 200 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 KBTBD3Q8NAB2 608 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 DCAF5Q96JK2 942 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 NCOA5Q9HCD5 579 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms