RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ATP2B3Q16720 1220 aa24.98■■□□□ 1.59
TRIM4-202ENST00000354241 CNBD1Q8NA66 436 aa24.98■■□□□ 1.59
TRIM4-202ENST00000354241 DDRGK1Q96HY6 314 aa24.98■■□□□ 1.59
TRIM4-202ENST00000354241 ESYT1Q9BSJ8 1104 aa24.98■■□□□ 1.59
TRIM4-202ENST00000354241 COL4A1P02462 1669 aa24.98■■□□□ 1.59
TRIM4-202ENST00000354241 TNRC6CQ9HCJ0 1690 aaKnown RBP24.97■■□□□ 1.59
TRIM4-202ENST00000354241 EN1Q05925 392 aaPredicted RBP24.97■■□□□ 1.59
TRIM4-202ENST00000354241 GORABQ5T7V8 394 aa24.97■■□□□ 1.59
TRIM4-202ENST00000354241 VGLL2Q8N8G2 317 aa24.97■■□□□ 1.59
TRIM4-202ENST00000354241 XAGE2Q96GT9 111 aa24.97■■□□□ 1.59
TRIM4-202ENST00000354241 PDE8BO95263 885 aa24.96■■□□□ 1.59
TRIM4-202ENST00000354241 ADORA1P30542 326 aa24.96■■□□□ 1.59
TRIM4-202ENST00000354241 EZH2Q15910 746 aaKnown RBP24.96■■□□□ 1.59
TRIM4-202ENST00000354241 COL23A1Q86Y22 540 aaPredicted RBP24.96■■□□□ 1.59
TRIM4-202ENST00000354241 REC8O95072 547 aa24.96■■□□□ 1.59
TRIM4-202ENST00000354241 ANKRD18AQ8IVF6 992 aa24.96■■□□□ 1.59
TRIM4-202ENST00000354241 HELBQ8NG08 1087 aaPredicted RBP24.96■■□□□ 1.59
TRIM4-202ENST00000354241 DNAJC2Q99543 621 aaKnown RBP24.96■■□□□ 1.59
TRIM4-202ENST00000354241 TM4SF1P30408 202 aa24.95■■□□□ 1.58
TRIM4-202ENST00000354241 FLAD1Q8NFF5 587 aa24.95■■□□□ 1.58
TRIM4-202ENST00000354241 SERPINB2P05120 415 aa24.94■■□□□ 1.58
TRIM4-202ENST00000354241 RBM25P49756 843 aaKnown RBP24.94■■□□□ 1.58
TRIM4-202ENST00000354241 CCDC158Q5M9N0 1113 aa24.94■■□□□ 1.58
TRIM4-202ENST00000354241 PRR5LQ6MZQ0 368 aa24.94■■□□□ 1.58
TRIM4-202ENST00000354241 CAMKK2Q96RR4 588 aa24.94■■□□□ 1.58
TRIM4-202ENST00000354241 HAUS7Q99871 368 aa24.94■■□□□ 1.58
TRIM4-202ENST00000354241 FSD1Q9BTV5 496 aa24.94■■□□□ 1.58
TRIM4-202ENST00000354241 DIAPH3Q9NSV4 1193 aa24.94■■□□□ 1.58
TRIM4-202ENST00000354241 NDUFB9Q9Y6M9 179 aa24.94■■□□□ 1.58
TRIM4-202ENST00000354241 SF3B2Q13435 895 aaKnown RBP24.93■■□□□ 1.58
TRIM4-202ENST00000354241 TTC39AQ5SRH9 613 aa24.93■■□□□ 1.58
TRIM4-202ENST00000354241 EDC3Q96F86 508 aaKnown RBP24.93■■□□□ 1.58
TRIM4-202ENST00000354241 PUM3Q15397 648 aaKnown RBP24.92■■□□□ 1.58
TRIM4-202ENST00000354241 USP26Q9BXU7 913 aa24.92■■□□□ 1.58
TRIM4-202ENST00000354241 ARAP2Q8WZ64 1704 aa24.92■■□□□ 1.58
TRIM4-202ENST00000354241 TAF5LO75529 589 aa24.92■■□□□ 1.58
TRIM4-202ENST00000354241 IFIT1P09914 478 aaKnown RBP24.92■■□□□ 1.58
TRIM4-202ENST00000354241 ST5P78524 1137 aa24.92■■□□□ 1.58
TRIM4-202ENST00000354241 PNPLA7Q6ZV29 1317 aa24.91■■□□□ 1.58
TRIM4-202ENST00000354241 DDR1Q08345 913 aa24.91■■□□□ 1.58
TRIM4-202ENST00000354241 CWC27Q6UX04 472 aaKnown RBP24.91■■□□□ 1.58
TRIM4-202ENST00000354241 CELF1Q92879 486 aaKnown RBP24.91■■□□□ 1.58
TRIM4-202ENST00000354241 A0A1B0GUL6 1792 aa24.91■■□□□ 1.58
TRIM4-202ENST00000354241 CHRNDQ07001 517 aa24.9■■□□□ 1.58
TRIM4-202ENST00000354241 POLRMTO00411 1230 aaKnown RBP24.9■■□□□ 1.58
TRIM4-202ENST00000354241 DDX46Q7L014 1031 aaKnown RBP24.9■■□□□ 1.58
TRIM4-202ENST00000354241 LPIN2Q92539 896 aa24.9■■□□□ 1.58
TRIM4-202ENST00000354241 BSDC1Q9NW68 430 aaPredicted RBP24.9■■□□□ 1.58
TRIM4-202ENST00000354241 HIP1O00291 1037 aa24.89■■□□□ 1.58
TRIM4-202ENST00000354241 FGFR2P21802 821 aa24.89■■□□□ 1.58
TRIM4-202ENST00000354241 NLGN1Q8N2Q7 840 aa24.89■■□□□ 1.58
TRIM4-202ENST00000354241 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.89■■□□□ 1.58
TRIM4-202ENST00000354241 IL25Q9H293 177 aa24.89■■□□□ 1.58
TRIM4-202ENST00000354241 ANO2Q9NQ90 1003 aa24.89■■□□□ 1.58
TRIM4-202ENST00000354241 SLC5A1P13866 664 aa24.88■■□□□ 1.57
TRIM4-202ENST00000354241 RUFY2Q8WXA3 655 aa24.88■■□□□ 1.57
TRIM4-202ENST00000354241 ANO8Q9HCE9 1232 aaPredicted RBP24.88■■□□□ 1.57
TRIM4-202ENST00000354241 GOLIM4O00461 696 aa24.88■■□□□ 1.57
TRIM4-202ENST00000354241 SGSM2O43147 1006 aa24.88■■□□□ 1.57
TRIM4-202ENST00000354241 BAG6P46379 1132 aa24.88■■□□□ 1.57
TRIM4-202ENST00000354241 PAG1Q9NWQ8 432 aa24.88■■□□□ 1.57
TRIM4-202ENST00000354241 RPS8P62241 208 aaKnown RBP24.87■■□□□ 1.57
TRIM4-202ENST00000354241 STK32BQ9NY57 414 aa24.87■■□□□ 1.57
TRIM4-202ENST00000354241 SNAP23O00161 211 aa24.86■■□□□ 1.57
TRIM4-202ENST00000354241 NMIQ13287 307 aaPredicted RBP24.86■■□□□ 1.57
TRIM4-202ENST00000354241 SLC15A2Q16348 729 aa24.86■■□□□ 1.57
TRIM4-202ENST00000354241 DEFB132Q7Z7B7 95 aa24.85■■□□□ 1.57
TRIM4-202ENST00000354241 SNRKQ9NRH2 765 aa24.85■■□□□ 1.57
TRIM4-202ENST00000354241 MINPP1Q9UNW1 487 aa24.85■■□□□ 1.57
TRIM4-202ENST00000354241 FKBP4Q02790 459 aaKnown RBP eCLIP24.84■■□□□ 1.57
TRIM4-202ENST00000354241 KBTBD3Q8NAB2 608 aa24.84■■□□□ 1.57
TRIM4-202ENST00000354241 FAM227BQ96M60 508 aa24.84■■□□□ 1.57
TRIM4-202ENST00000354241 SCARF1Q14162 830 aa24.84■■□□□ 1.57
TRIM4-202ENST00000354241 CCDC102BQ68D86 513 aa24.84■■□□□ 1.57
TRIM4-202ENST00000354241 RPGRQ92834 1020 aaKnown RBP24.84■■□□□ 1.57
TRIM4-202ENST00000354241 RFX7Q2KHR2 1363 aa24.84■■□□□ 1.57
TRIM4-202ENST00000354241 MSL1Q68DK7 614 aa24.83■■□□□ 1.57
TRIM4-202ENST00000354241 DAXXQ9UER7 740 aaPredicted RBP24.83■■□□□ 1.57
TRIM4-202ENST00000354241 AKAP11Q9UKA4 1901 aa24.83■■□□□ 1.57
TRIM4-202ENST00000354241 QSER1Q2KHR3 1735 aa24.83■■□□□ 1.56
TRIM4-202ENST00000354241 PHKA1P46020 1223 aa24.82■■□□□ 1.56
TRIM4-202ENST00000354241 KIAA1211Q6ZU35 1233 aa24.82■■□□□ 1.56
TRIM4-202ENST00000354241 KIF2CQ99661 725 aa24.82■■□□□ 1.56
TRIM4-202ENST00000354241 NRXN2Q9P2S2 1712 aa24.82■■□□□ 1.56
TRIM4-202ENST00000354241 GRAPQ13588 217 aa24.82■■□□□ 1.56
TRIM4-202ENST00000354241 GRAPLQ8TC17 118 aaPredicted RBP24.82■■□□□ 1.56
TRIM4-202ENST00000354241 ZNF512BQ96KM6 892 aaPredicted RBP24.82■■□□□ 1.56
TRIM4-202ENST00000354241 ANTXR1Q9H6X2 564 aa24.82■■□□□ 1.56
TRIM4-202ENST00000354241 A0A0D9SFI3 127 aa24.81■■□□□ 1.56
TRIM4-202ENST00000354241 UQCRFS1P1P0C7P4 283 aa24.81■■□□□ 1.56
TRIM4-202ENST00000354241 MCCP23508 829 aa24.81■■□□□ 1.56
TRIM4-202ENST00000354241 MCAMP43121 646 aa24.81■■□□□ 1.56
TRIM4-202ENST00000354241 ZAP70P43403 619 aa24.81■■□□□ 1.56
TRIM4-202ENST00000354241 MMP10P09238 476 aa24.8■■□□□ 1.56
TRIM4-202ENST00000354241 SLC4A3P48751 1232 aa24.8■■□□□ 1.56
TRIM4-202ENST00000354241 BECN1Q14457 450 aa24.8■■□□□ 1.56
TRIM4-202ENST00000354241 PARP3Q9Y6F1 533 aa24.8■■□□□ 1.56
TRIM4-202ENST00000354241 RAD50Q92878 1312 aa24.8■■□□□ 1.56
TRIM4-202ENST00000354241 ANKRD31Q8N7Z5 1873 aa24.8■■□□□ 1.56
TRIM4-202ENST00000354241 ARID4AP29374 1257 aaPredicted RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms