RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 IGHDP01880 384 aa12.64□□□□□ -0.39
SMARCE1-202ENST00000348513 ARHGAP25P42331 645 aa12.64□□□□□ -0.39
SMARCE1-202ENST00000348513 KIF5CO60282 957 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 ZCRB1Q8TBF4 217 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 XAGE3Q8WTP9 111 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 VCXQ9H320 206 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 SLC24A3Q9HC58 644 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 LIMCH1Q9UPQ0 1083 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 CEP63Q96MT8 703 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 RNF41Q9H4P4 317 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 MSH6P52701 1360 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 UBAP1LF5GYI3 381 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 PFDN1O60925 122 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 TEX13AQ9BXU3 409 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 CCDC160A6NGH7 325 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 ZBTB22O15209 634 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 GJB2P29033 226 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 PPIP5K1Q6PFW1 1433 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 DNA2P51530 1060 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 EFCAB13Q8IY85 973 aa12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 SH2B1Q9NRF2 756 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-202ENST00000348513 TTC36A6NLP5 189 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 BIN1O00499 593 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 USP16Q9Y5T5 823 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 ISM2Q6H9L7 571 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 COPS6Q7L5N1 327 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 NEK11Q8NG66 645 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 N4BP2L2Q92802 583 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 MEIS3Q99687 375 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 OAS2P29728 719 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 MCM6Q14566 821 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 INF2Q27J81 1249 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 HDXQ7Z353 690 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 DDX12PQ92771 950 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 CXorf56Q9H5V9 222 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 E2F4Q16254 413 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 CPLX3Q8WVH0 158 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 LUC7L2Q9Y383 392 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 BICRAQ9NZM4 1560 aa12.62□□□□□ -0.39
SMARCE1-202ENST00000348513 ST5P78524 1137 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 LRRC2Q9BYS8 371 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 RPRD2Q5VT52 1461 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 HSF2BPO75031 334 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 RANBP1P43487 201 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 CCDC6Q16204 474 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 RBM27Q9P2N5 1060 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 FRMD3A2A2Y4 597 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 OPA1O60313 960 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 BAG4O95429 457 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 KAT14Q9H8E8 782 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 NSD2O96028 1365 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 TMEM266Q2M3C6 531 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 TSG101Q99816 390 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 SLC26A6Q9BXS9 759 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 ANKRD36BQ8N2N9 1353 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 MXRA7P84157 204 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 PPP4R3AQ6IN85 833 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 TAF4BQ92750 862 aa12.61□□□□□ -0.39
SMARCE1-202ENST00000348513 SLC8A1P32418 973 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 FSIP1Q8NA03 581 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 GOLGA1Q92805 767 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 HMGB2P26583 209 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 CCDC152Q4G0S7 254 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 MICAL1Q8TDZ2 1067 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 PRDM4Q9UKN5 801 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 PLEKHH1Q9ULM0 1364 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 SCAND2PQ9GZW5 306 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 LUC7L3O95232 432 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 TCEANC2Q96MN5 208 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 TTC12Q9H892 705 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 TMEM51Q9NW97 253 aa12.6□□□□□ -0.39
SMARCE1-202ENST00000348513 HSPA2P54652 639 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 FAM76AQ8TAV0 307 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 BAG3O95817 575 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 METAP2P50579 478 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 FKBP15Q5T1M5 1219 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 TTC22Q5TAA0 569 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 SPTY2D1Q68D10 685 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 C8orf58Q8NAV2 365 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 CCDC150Q8NCX0 1101 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 TACO1Q9BSH4 297 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 ANO10Q9NW15 660 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 GPATCH8Q9UKJ3 1502 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 PDE4BQ07343 736 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 PDCD2Q16342 344 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 MMS22LQ6ZRQ5 1243 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 ANKS4BQ8N8V4 417 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 NEK1Q96PY6 1258 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms