RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 BICC1Q9H694 974 aaKnown RBP21.4■■□□□ 1.02
UBE3C-201ENST00000348165 ANAPC15P60006 121 aa21.39■■□□□ 1.02
UBE3C-201ENST00000348165 CBX1P83916 185 aa21.39■■□□□ 1.02
UBE3C-201ENST00000348165 TMC6Q7Z403 805 aa21.39■■□□□ 1.01
UBE3C-201ENST00000348165 FAM89AQ96GI7 184 aa21.39■■□□□ 1.01
UBE3C-201ENST00000348165 PRC1O43663 620 aa21.39■■□□□ 1.01
UBE3C-201ENST00000348165 CCDC102AQ96A19 550 aa21.39■■□□□ 1.01
UBE3C-201ENST00000348165 ZHX1Q9UKY1 873 aaPredicted RBP21.39■■□□□ 1.01
UBE3C-201ENST00000348165 NYXQ9GZU5 481 aa21.38■■□□□ 1.01
UBE3C-201ENST00000348165 HCLS1P14317 486 aaPredicted RBP21.38■■□□□ 1.01
UBE3C-201ENST00000348165 USP8P40818 1118 aa21.38■■□□□ 1.01
UBE3C-201ENST00000348165 KIF18AQ8NI77 898 aa21.38■■□□□ 1.01
UBE3C-201ENST00000348165 NEBLO76041 1014 aa21.38■■□□□ 1.01
UBE3C-201ENST00000348165 SYKP43405 635 aa21.38■■□□□ 1.01
UBE3C-201ENST00000348165 CNPY2Q9Y2B0 182 aa21.38■■□□□ 1.01
UBE3C-201ENST00000348165 TTC41PQ6P2S7 1318 aa21.38■■□□□ 1.01
UBE3C-201ENST00000348165 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.38■■□□□ 1.01
UBE3C-201ENST00000348165 MAGEB6P1A0A0J9YX57 407 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 YEATS4O95619 227 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 CETN2P41208 172 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 HEATR3Q7Z4Q2 680 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 TMX1Q9H3N1 280 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 PCDH11XQ9BZA7 1347 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 PCDH11YQ9BZA8 1340 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 KIF2AO00139 706 aaPredicted RBP21.37■■□□□ 1.01
UBE3C-201ENST00000348165 ZNF804AQ7Z570 1209 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 PIK3C2GO75747 1445 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 RNF113AO15541 343 aaKnown RBP21.37■■□□□ 1.01
UBE3C-201ENST00000348165 ADCY5O95622 1261 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 KLHL40Q2TBA0 621 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 ZNF790Q6PG37 636 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 WDR62O43379 1518 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 TRPM2O94759 1503 aa21.37■■□□□ 1.01
UBE3C-201ENST00000348165 SOS1Q07889 1333 aaPredicted RBP21.37■■□□□ 1.01
UBE3C-201ENST00000348165 UNC13AQ9UPW8 1703 aa21.36■■□□□ 1.01
UBE3C-201ENST00000348165 ZFYVE9O95405 1425 aa21.36■■□□□ 1.01
UBE3C-201ENST00000348165 AFMP43652 599 aa21.36■■□□□ 1.01
UBE3C-201ENST00000348165 PLEKHM2Q8IWE5 1019 aa21.36■■□□□ 1.01
UBE3C-201ENST00000348165 MAGEB6Q8N7X4 407 aa21.36■■□□□ 1.01
UBE3C-201ENST00000348165 MCM9Q9NXL9 1143 aa21.36■■□□□ 1.01
UBE3C-201ENST00000348165 CGNQ9P2M7 1197 aaKnown RBP21.36■■□□□ 1.01
UBE3C-201ENST00000348165 MARCKSP29966 332 aaPredicted RBP21.36■■□□□ 1.01
UBE3C-201ENST00000348165 TRIM21P19474 475 aaKnown RBP21.35■■□□□ 1.01
UBE3C-201ENST00000348165 IL13P35225 146 aa21.35■■□□□ 1.01
UBE3C-201ENST00000348165 TIMM10P62072 90 aa21.35■■□□□ 1.01
UBE3C-201ENST00000348165 KANK3Q6NY19 840 aa21.35■■□□□ 1.01
UBE3C-201ENST00000348165 SMC5Q8IY18 1101 aa21.35■■□□□ 1.01
UBE3C-201ENST00000348165 LGR6Q9HBX8 967 aa21.35■■□□□ 1.01
UBE3C-201ENST00000348165 RIMBP2O15034 1052 aa21.35■■□□□ 1.01
UBE3C-201ENST00000348165 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
UBE3C-201ENST00000348165 C16orf45Q96MC5 204 aaPredicted RBP21.35■■□□□ 1.01
UBE3C-201ENST00000348165 HDAC9Q9UKV0 1011 aa21.35■■□□□ 1.01
UBE3C-201ENST00000348165 GNPATO15228 680 aa21.34■■□□□ 1.01
UBE3C-201ENST00000348165 SYCP3Q8IZU3 236 aa21.34■■□□□ 1.01
UBE3C-201ENST00000348165 C8orf34Q49A92 452 aa21.34■■□□□ 1.01
UBE3C-201ENST00000348165 HSP90AA4PQ58FG1 418 aa21.34■■□□□ 1.01
UBE3C-201ENST00000348165 MACROD2A1Z1Q3 448 aa21.34■■□□□ 1.01
UBE3C-201ENST00000348165 CETN1Q12798 172 aa21.34■■□□□ 1.01
UBE3C-201ENST00000348165 USO1O60763 962 aaKnown RBP21.33■■□□□ 1.01
UBE3C-201ENST00000348165 ABCC2Q92887 1545 aa21.33■■□□□ 1.01
UBE3C-201ENST00000348165 GNAQP50148 359 aa21.33■■□□□ 1.01
UBE3C-201ENST00000348165 UHRF1BP1Q6BDS2 1440 aa21.33■■□□□ 1.01
UBE3C-201ENST00000348165 TNNT1P13805 278 aa21.33■■□□□ 1.01
UBE3C-201ENST00000348165 DNM1Q05193 864 aaKnown RBP21.33■■□□□ 1.01
UBE3C-201ENST00000348165 CREB3L3Q68CJ9 461 aa21.33■■□□□ 1
UBE3C-201ENST00000348165 VEZTQ9HBM0 779 aa21.33■■□□□ 1
UBE3C-201ENST00000348165 LMTK3Q96Q04 1460 aa21.33■■□□□ 1
UBE3C-201ENST00000348165 ZBTB7BO15156 539 aaPredicted RBP21.32■■□□□ 1
UBE3C-201ENST00000348165 CASQ1P31415 396 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 USP48Q86UV5 1035 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 PYM1Q9BRP8 204 aaKnown RBP21.32■■□□□ 1
UBE3C-201ENST00000348165 APOBRQ0VD83 1088 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 CCDC178Q5BJE1 867 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 KLHDC4Q8TBB5 520 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 TRIM47Q96LD4 638 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 AK2P54819 239 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 RBM26Q5T8P6 1007 aaKnown RBP21.32■■□□□ 1
UBE3C-201ENST00000348165 N4BP3O15049 544 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 NAPAP54920 295 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 DDX17Q92841 729 aaKnown RBP21.32■■□□□ 1
UBE3C-201ENST00000348165 CALCOCO1Q9P1Z2 691 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 CHMLP26374 656 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 ZSCAN23Q3MJ62 389 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 KCNG4Q8TDN1 519 aa21.32■■□□□ 1
UBE3C-201ENST00000348165 CRACR2AQ9BSW2 395 aa21.31■■□□□ 1
UBE3C-201ENST00000348165 TMCO3Q6UWJ1 677 aa21.31■■□□□ 1
UBE3C-201ENST00000348165 LUZP1Q86V48 1076 aa21.31■■□□□ 1
UBE3C-201ENST00000348165 DACT1Q9NYF0 836 aa21.31■■□□□ 1
UBE3C-201ENST00000348165 PARP3Q9Y6F1 533 aa21.31■■□□□ 1
UBE3C-201ENST00000348165 RXRAP19793 462 aa21.31■■□□□ 1
UBE3C-201ENST00000348165 TBCAO75347 108 aaKnown RBP21.3■■□□□ 1
UBE3C-201ENST00000348165 KIAA0754O94854 1291 aa21.3■■□□□ 1
UBE3C-201ENST00000348165 A1BGP04217 495 aa21.3■■□□□ 1
UBE3C-201ENST00000348165 GSDMDP57764 484 aa21.3■■□□□ 1
UBE3C-201ENST00000348165 RRAGBQ5VZM2 374 aa21.3■■□□□ 1
UBE3C-201ENST00000348165 EXOC1Q9NV70 894 aa21.3■■□□□ 1
UBE3C-201ENST00000348165 SHANK2Q9UPX8 1470 aa21.3■■□□□ 1
UBE3C-201ENST00000348165 F13A1P00488 732 aa21.3■■□□□ 1
UBE3C-201ENST00000348165 PAFAH1B1P43034 410 aa21.3■■□□□ 1
UBE3C-201ENST00000348165 STXBP4Q6ZWJ1 553 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms