RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 LIMCH1Q9UPQ0 1083 aa20.53■□□□□ 0.88
SMARCC2-202ENST00000347471 ADAMTS7Q9UKP4 1686 aa20.52■□□□□ 0.88
SMARCC2-202ENST00000347471 SMARCC1Q92922 1105 aaPredicted RBP20.52■□□□□ 0.88
SMARCC2-202ENST00000347471 HSPA1LP34931 641 aa20.51■□□□□ 0.87
SMARCC2-202ENST00000347471 TRIM28Q13263 835 aaKnown RBP20.51■□□□□ 0.87
SMARCC2-202ENST00000347471 DDIT3P35638 169 aa20.51■□□□□ 0.87
SMARCC2-202ENST00000347471 MAP4K1Q92918 833 aa20.51■□□□□ 0.87
SMARCC2-202ENST00000347471 PLEKHG2Q9H7P9 1386 aa20.51■□□□□ 0.87
SMARCC2-202ENST00000347471 LINC00116Q8NCU8 138 aa20.51■□□□□ 0.87
SMARCC2-202ENST00000347471 CCNL1Q9UK58 526 aaPredicted RBP20.51■□□□□ 0.87
SMARCC2-202ENST00000347471 TTLL5Q6EMB2 1281 aa20.5■□□□□ 0.87
SMARCC2-202ENST00000347471 A0A0G2JLW4 131 aa20.5■□□□□ 0.87
SMARCC2-202ENST00000347471 NECTIN1Q15223 517 aa20.5■□□□□ 0.87
SMARCC2-202ENST00000347471 PSMA5P28066 241 aa20.5■□□□□ 0.87
SMARCC2-202ENST00000347471 IGHMBP2P38935 993 aaKnown RBP20.49■□□□□ 0.87
SMARCC2-202ENST00000347471 PHKA1P46020 1223 aa20.49■□□□□ 0.87
SMARCC2-202ENST00000347471 CAVIN1Q6NZI2 390 aaKnown RBP20.49■□□□□ 0.87
SMARCC2-202ENST00000347471 FERMT3Q86UX7 667 aa20.49■□□□□ 0.87
SMARCC2-202ENST00000347471 ABCA3Q99758 1704 aa20.49■□□□□ 0.87
SMARCC2-202ENST00000347471 ZNF652Q9Y2D9 606 aa20.49■□□□□ 0.87
SMARCC2-202ENST00000347471 USPL1Q5W0Q7 1092 aa20.48■□□□□ 0.87
SMARCC2-202ENST00000347471 RAB11FIP4Q86YS3 637 aa20.48■□□□□ 0.87
SMARCC2-202ENST00000347471 ZPR1O75312 459 aa20.48■□□□□ 0.87
SMARCC2-202ENST00000347471 AK9Q5TCS8 1911 aa20.48■□□□□ 0.87
SMARCC2-202ENST00000347471 GOLGA6L3A6NEY3 463 aa20.48■□□□□ 0.87
SMARCC2-202ENST00000347471 BARGINQ6ZT62 677 aa20.48■□□□□ 0.87
SMARCC2-202ENST00000347471 PHLPP1O60346 1717 aa20.48■□□□□ 0.87
SMARCC2-202ENST00000347471 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 AFDNP55196 1824 aaKnown RBP20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 KDM4AO75164 1064 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 CIAO1O76071 339 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 DDX11Q96FC9 970 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 JCADQ9P266 1359 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 RNF113AO15541 343 aaKnown RBP20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 CSF1RP07333 972 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 VPS72Q15906 364 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 SLC9C2Q5TAH2 1124 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 ZNF34Q8IZ26 560 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 ZDHHC9Q9Y397 364 aa20.47■□□□□ 0.87
SMARCC2-202ENST00000347471 COL14A1Q05707 1796 aaKnown RBP20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 ABCF2Q9UG63 623 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 LTBP4Q8N2S1 1624 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 ERFEQ4G0M1 354 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 NEK1Q96PY6 1258 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 ZNF609O15014 1411 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 GJB2P29033 226 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 ME3Q16798 604 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 OSBP2Q969R2 916 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 RIPOR2Q9Y4F9 1068 aa20.46■□□□□ 0.87
SMARCC2-202ENST00000347471 AFF2P51816 1311 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 CYP21A2P08686 494 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 VPS37DQ86XT2 251 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 TOMM22Q9NS69 142 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 TPCN1Q9ULQ1 816 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 M0R2C6 588 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 PDE8BO95263 885 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 BRF1Q92994 677 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 RBM27Q9P2N5 1060 aaKnown RBP20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 JAG2Q9Y219 1238 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 MCAMP43121 646 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 NBPF5PQ86XG9 351 aaPredicted RBP20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 ARFGEF2Q9Y6D5 1785 aa20.45■□□□□ 0.86
SMARCC2-202ENST00000347471 TOGARAM1Q9Y4F4 1720 aa20.44■□□□□ 0.86
SMARCC2-202ENST00000347471 COL15A1P39059 1388 aa20.44■□□□□ 0.86
SMARCC2-202ENST00000347471 WTIPA6NIX2 430 aaPredicted RBP20.44■□□□□ 0.86
SMARCC2-202ENST00000347471 FIBPO43427 364 aa20.44■□□□□ 0.86
SMARCC2-202ENST00000347471 CCDC102BQ68D86 513 aa20.44■□□□□ 0.86
SMARCC2-202ENST00000347471 U3KPZ7 1027 aaPredicted RBP20.44■□□□□ 0.86
SMARCC2-202ENST00000347471 TTC14Q96N46 770 aa20.44■□□□□ 0.86
SMARCC2-202ENST00000347471 ZSWIM6Q9HCJ5 1215 aa20.44■□□□□ 0.86
SMARCC2-202ENST00000347471 MAST3O60307 1309 aa20.44■□□□□ 0.86
SMARCC2-202ENST00000347471 BCAMP50895 628 aa20.43■□□□□ 0.86
SMARCC2-202ENST00000347471 CCT2P78371 535 aaKnown RBP20.43■□□□□ 0.86
SMARCC2-202ENST00000347471 Q6ZUG5 572 aa20.43■□□□□ 0.86
SMARCC2-202ENST00000347471 GPR108Q9NPR9 543 aa20.43■□□□□ 0.86
SMARCC2-202ENST00000347471 SETDB2Q96T68 719 aa20.42■□□□□ 0.86
SMARCC2-202ENST00000347471 PUS7LQ9H0K6 701 aaKnown RBP20.42■□□□□ 0.86
SMARCC2-202ENST00000347471 RTCBQ9Y3I0 505 aaKnown RBP20.42■□□□□ 0.86
SMARCC2-202ENST00000347471 AHDC1Q5TGY3 1603 aaPredicted RBP20.42■□□□□ 0.86
SMARCC2-202ENST00000347471 HSPD1P10809 573 aaKnown RBP20.42■□□□□ 0.86
SMARCC2-202ENST00000347471 SLC5A1P13866 664 aa20.42■□□□□ 0.86
SMARCC2-202ENST00000347471 TBC1D9BQ66K14 1250 aa20.42■□□□□ 0.86
SMARCC2-202ENST00000347471 SEPT12Q8IYM1 358 aa20.42■□□□□ 0.86
SMARCC2-202ENST00000347471 COL16A1Q07092 1604 aaPredicted RBP20.42■□□□□ 0.86
SMARCC2-202ENST00000347471 C3orf67Q6ZVT6 689 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 IL27Q8NEV9 243 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 CDHR2Q9BYE9 1310 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 RPS6KB1P23443 525 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 CUL4AQ13619 759 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 PARP10Q53GL7 1025 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 PLA2G12BQ9BX93 195 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 RFC4P35249 363 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 FAM173BQ6P4H8 233 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 CERKQ8TCT0 537 aa20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 GJD4Q96KN9 370 aaPredicted RBP20.41■□□□□ 0.86
SMARCC2-202ENST00000347471 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.41■□□□□ 0.866e-7■■□□□ 14
SMARCC2-202ENST00000347471 SYT1P21579 422 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms