RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 H7C1W4 665 aa28.6■■■□□ 2.17
PTPA-202ENST00000347048 RESTQ13127 1097 aa28.6■■■□□ 2.17
PTPA-202ENST00000347048 DNTTIP2Q5QJE6 756 aaKnown RBP28.6■■■□□ 2.17
PTPA-202ENST00000347048 DACT1Q9NYF0 836 aa28.6■■■□□ 2.17
PTPA-202ENST00000347048 ATP5J2-PTCD1G3V325 749 aa28.59■■■□□ 2.17
PTPA-202ENST00000347048 PTCD1O75127 700 aaKnown RBP28.59■■■□□ 2.17
PTPA-202ENST00000347048 HSP90B1P14625 803 aaKnown RBP28.59■■■□□ 2.17
PTPA-202ENST00000347048 ATF3P18847 181 aa28.59■■■□□ 2.17
PTPA-202ENST00000347048 MYRIPQ8NFW9 859 aa28.59■■■□□ 2.17
PTPA-202ENST00000347048 JARID2Q92833 1246 aaPredicted RBP28.59■■■□□ 2.17
PTPA-202ENST00000347048 PLCB2Q00722 1185 aa28.59■■■□□ 2.17
PTPA-202ENST00000347048 LMBR1LQ6UX01 489 aa28.59■■■□□ 2.17
PTPA-202ENST00000347048 SMARCC2Q8TAQ2 1214 aa28.59■■■□□ 2.17
PTPA-202ENST00000347048 DSCC1Q9BVC3 393 aa28.59■■■□□ 2.17
PTPA-202ENST00000347048 CFAP45Q9UL16 551 aa28.59■■■□□ 2.17
PTPA-202ENST00000347048 TNS3Q68CZ2 1445 aa28.58■■■□□ 2.17
PTPA-202ENST00000347048 AP5Z1O43299 807 aa28.58■■■□□ 2.17
PTPA-202ENST00000347048 FOXO4P98177 505 aa28.58■■■□□ 2.17
PTPA-202ENST00000347048 BRF1Q92994 677 aa28.58■■■□□ 2.17
PTPA-202ENST00000347048 H3BQV1 296 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 PFKFB2O60825 505 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 IFFO2Q5TF58 517 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 KIF3AQ9Y496 699 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 SPEF2Q9C093 1822 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 JAK2O60674 1132 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 CAVIN2O95810 425 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 CCDC129Q6ZRS4 1044 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 DDX46Q7L014 1031 aaKnown RBP28.57■■■□□ 2.16
PTPA-202ENST00000347048 CHMP4CQ96CF2 233 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 TFIP11Q9UBB9 837 aaKnown RBP28.57■■■□□ 2.16
PTPA-202ENST00000347048 CPDO75976 1380 aa28.57■■■□□ 2.16
PTPA-202ENST00000347048 IL15P40933 162 aaPredicted RBP28.56■■■□□ 2.16
PTPA-202ENST00000347048 PIP4K2AP48426 406 aaPredicted RBP28.56■■■□□ 2.16
PTPA-202ENST00000347048 DHX32Q7L7V1 743 aaKnown RBP28.56■■■□□ 2.16
PTPA-202ENST00000347048 SEC62Q99442 399 aaKnown RBP28.56■■■□□ 2.16
PTPA-202ENST00000347048 NUP188Q5SRE5 1749 aa28.56■■■□□ 2.16
PTPA-202ENST00000347048 NAA16Q6N069 864 aaPredicted RBP28.55■■■□□ 2.16
PTPA-202ENST00000347048 PAG1Q9NWQ8 432 aa28.55■■■□□ 2.16
PTPA-202ENST00000347048 MPNDQ8N594 471 aa28.55■■■□□ 2.16
PTPA-202ENST00000347048 CWC25Q9NXE8 425 aaPredicted RBP28.55■■■□□ 2.16
PTPA-202ENST00000347048 FAM13BQ9NYF5 915 aa28.55■■■□□ 2.16
PTPA-202ENST00000347048 RBM10P98175 930 aaKnown RBP28.54■■■□□ 2.16
PTPA-202ENST00000347048 CAMK4Q16566 473 aa28.54■■■□□ 2.16
PTPA-202ENST00000347048 ATG9AQ7Z3C6 839 aa28.54■■■□□ 2.16
PTPA-202ENST00000347048 KIAA1524Q8TCG1 905 aa28.54■■■□□ 2.16
PTPA-202ENST00000347048 BICD2Q8TD16 824 aa28.54■■■□□ 2.16
PTPA-202ENST00000347048 CHMP3Q9Y3E7 222 aa28.54■■■□□ 2.16
PTPA-202ENST00000347048 NDUFB9Q9Y6M9 179 aa28.54■■■□□ 2.16
PTPA-202ENST00000347048 FGD1P98174 961 aa28.53■■■□□ 2.16
PTPA-202ENST00000347048 SCRN1Q12765 414 aa28.53■■■□□ 2.16
PTPA-202ENST00000347048 AGXT2Q9BYV1 514 aa28.53■■■□□ 2.16
PTPA-202ENST00000347048 LAMA4Q16363 1823 aa28.53■■■□□ 2.16
PTPA-202ENST00000347048 ZMYM1Q5SVZ6 1142 aa28.53■■■□□ 2.16
PTPA-202ENST00000347048 PGBD1Q96JS3 809 aa28.53■■■□□ 2.16
PTPA-202ENST00000347048 ATG3Q9NT62 314 aa28.53■■■□□ 2.16
PTPA-202ENST00000347048 TJP1Q07157 1748 aa28.52■■■□□ 2.16
PTPA-202ENST00000347048 GTF2F1P35269 517 aaKnown RBP eCLIP28.52■■■□□ 2.166e-11■■■■■ 32.8
PTPA-202ENST00000347048 ATL3Q6DD88 541 aa28.52■■■□□ 2.16
PTPA-202ENST00000347048 UBR2Q8IWV8 1755 aa28.52■■■□□ 2.16
PTPA-202ENST00000347048 ANO6Q4KMQ2 910 aa28.51■■■□□ 2.16
PTPA-202ENST00000347048 STOX1Q6ZVD7 989 aa28.51■■■□□ 2.16
PTPA-202ENST00000347048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.51■■■□□ 2.16
PTPA-202ENST00000347048 CBX8Q9HC52 389 aa28.51■■■□□ 2.16
PTPA-202ENST00000347048 MYH15Q9Y2K3 1946 aa28.51■■■□□ 2.15
PTPA-202ENST00000347048 CIAO1O76071 339 aa28.51■■■□□ 2.15
PTPA-202ENST00000347048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.51■■■□□ 2.15
PTPA-202ENST00000347048 TDRD7Q8NHU6 1098 aaKnown RBP28.51■■■□□ 2.15
PTPA-202ENST00000347048 KCNF1Q9H3M0 494 aa28.51■■■□□ 2.15
PTPA-202ENST00000347048 NBPF26B4DH59 902 aa28.5■■■□□ 2.15
PTPA-202ENST00000347048 GOLIM4O00461 696 aa28.5■■■□□ 2.15
PTPA-202ENST00000347048 EXOSC10Q01780 885 aaKnown RBP28.5■■■□□ 2.15
PTPA-202ENST00000347048 NBPF14Q5TI25 921 aa28.5■■■□□ 2.15
PTPA-202ENST00000347048 NBPF10Q6P3W6 841 aaKnown RBP28.5■■■□□ 2.15
PTPA-202ENST00000347048 CADPS2Q86UW7 1296 aa28.5■■■□□ 2.15
PTPA-202ENST00000347048 CKAP2LQ8IYA6 745 aa28.5■■■□□ 2.15
PTPA-202ENST00000347048 NBPF15Q8N660 670 aa28.5■■■□□ 2.15
PTPA-202ENST00000347048 NSUN7Q8NE18 718 aaKnown RBP28.5■■■□□ 2.15
PTPA-202ENST00000347048 NEUROD6Q96NK8 337 aa28.5■■■□□ 2.15
PTPA-202ENST00000347048 CCDC191Q8NCU4 936 aa28.5■■■□□ 2.15
PTPA-202ENST00000347048 EYA2O00167 538 aa28.49■■■□□ 2.15
PTPA-202ENST00000347048 NR1I2O75469 434 aa28.49■■■□□ 2.15
PTPA-202ENST00000347048 LUZP1Q86V48 1076 aa28.49■■■□□ 2.15
PTPA-202ENST00000347048 CTAGE5O15320 804 aa28.48■■■□□ 2.15
PTPA-202ENST00000347048 CHRNA2Q15822 529 aa28.48■■■□□ 2.15
PTPA-202ENST00000347048 PCDH11XQ9BZA7 1347 aa28.48■■■□□ 2.15
PTPA-202ENST00000347048 PCDH11YQ9BZA8 1340 aa28.48■■■□□ 2.15
PTPA-202ENST00000347048 CHGBP05060 677 aa28.48■■■□□ 2.15
PTPA-202ENST00000347048 DDX11Q96FC9 970 aa28.48■■■□□ 2.15
PTPA-202ENST00000347048 SPATA31A3Q5VYP0 1347 aa28.47■■■□□ 2.15
PTPA-202ENST00000347048 ERVV-2B6SEH9 535 aa28.47■■■□□ 2.15
PTPA-202ENST00000347048 LRRFIP1Q32MZ4 808 aaKnown RBP28.47■■■□□ 2.15
PTPA-202ENST00000347048 SPC24Q8NBT2 197 aa28.47■■■□□ 2.15
PTPA-202ENST00000347048 RCOR1Q9UKL0 485 aa28.47■■■□□ 2.15
PTPA-202ENST00000347048 RNF113AO15541 343 aaKnown RBP28.46■■■□□ 2.15
PTPA-202ENST00000347048 CABLES1Q8TDN4 633 aa28.46■■■□□ 2.15
PTPA-202ENST00000347048 ZNF274Q96GC6 653 aaPredicted RBP28.46■■■□□ 2.15
PTPA-202ENST00000347048 PAPPAQ13219 1627 aa28.46■■■□□ 2.15
PTPA-202ENST00000347048 FBXL16Q8N461 479 aa28.46■■■□□ 2.15
PTPA-202ENST00000347048 PTPDC1A2A3K4 754 aa28.45■■■□□ 2.14
PTPA-202ENST00000347048 IFIT1P09914 478 aaKnown RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms