RNA–Protein interactions for RNA: ENST00000346997.6

FGFR2-202, Transcript of fibroblast growth factor receptor 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FGFR2, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-202ENST00000346997 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.41
FGFR2-202ENST00000346997 KCNA1Q09470 495 aa12.52□□□□□ -0.41
FGFR2-202ENST00000346997 KIAA1211Q6ZU35 1233 aa12.52□□□□□ -0.41
FGFR2-202ENST00000346997 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
FGFR2-202ENST00000346997 CASP7P55210 303 aa12.51□□□□□ -0.41
FGFR2-202ENST00000346997 APBB1IPQ7Z5R6 666 aaPredicted RBP12.51□□□□□ -0.41
FGFR2-202ENST00000346997 IPO4Q8TEX9 1081 aaKnown RBP12.51□□□□□ -0.41
FGFR2-202ENST00000346997 TNPO1Q92973 898 aaKnown RBP12.51□□□□□ -0.41
FGFR2-202ENST00000346997 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
FGFR2-202ENST00000346997 ATG3Q9NT62 314 aa12.51□□□□□ -0.41
FGFR2-202ENST00000346997 RFX5P48382 616 aaPredicted RBP12.51□□□□□ -0.41
FGFR2-202ENST00000346997 RAB3GAP1Q15042 981 aa12.51□□□□□ -0.41
FGFR2-202ENST00000346997 L1TD1Q5T7N2 865 aaKnown RBP12.51□□□□□ -0.41
FGFR2-202ENST00000346997 EVI5LQ96CN4 794 aa12.51□□□□□ -0.41
FGFR2-202ENST00000346997 BOLA2Q9H3K6 86 aa12.51□□□□□ -0.41
FGFR2-202ENST00000346997 H7C1W4 665 aa12.5□□□□□ -0.41
FGFR2-202ENST00000346997 RRP9O43818 475 aaKnown RBP12.5□□□□□ -0.41
FGFR2-202ENST00000346997 TFCP2Q12800 502 aa12.5□□□□□ -0.41
FGFR2-202ENST00000346997 UPF3BQ9BZI7 483 aaKnown RBP12.5□□□□□ -0.41
FGFR2-202ENST00000346997 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
FGFR2-202ENST00000346997 STARD3NLO95772 234 aa12.5□□□□□ -0.41
FGFR2-202ENST00000346997 CCDC191Q8NCU4 936 aa12.5□□□□□ -0.41
FGFR2-202ENST00000346997 RUFY2Q8WXA3 655 aa12.5□□□□□ -0.41
FGFR2-202ENST00000346997 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
FGFR2-202ENST00000346997 RAD50Q92878 1312 aa12.5□□□□□ -0.41
FGFR2-202ENST00000346997 COL15A1P39059 1388 aa12.5□□□□□ -0.41
FGFR2-202ENST00000346997 HSPA4P34932 840 aa12.49□□□□□ -0.41
FGFR2-202ENST00000346997 FOXO4P98177 505 aa12.49□□□□□ -0.41
FGFR2-202ENST00000346997 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
FGFR2-202ENST00000346997 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
FGFR2-202ENST00000346997 ITGB4P16144 1822 aa12.49□□□□□ -0.41
FGFR2-202ENST00000346997 TNNI3KQ59H18 835 aa12.49□□□□□ -0.41
FGFR2-202ENST00000346997 GBP4Q96PP9 640 aa12.49□□□□□ -0.41
FGFR2-202ENST00000346997 FPGT-TNNI3KV9GXZ4 949 aa12.49□□□□□ -0.41
FGFR2-202ENST00000346997 DOT1LQ8TEK3 1739 aa12.49□□□□□ -0.41
FGFR2-202ENST00000346997 TRIM66O15016 1216 aa12.48□□□□□ -0.41
FGFR2-202ENST00000346997 EPB41L2O43491 1005 aaKnown RBP12.48□□□□□ -0.41
FGFR2-202ENST00000346997 ZGPATQ8N5A5 531 aaKnown RBP12.48□□□□□ -0.41
FGFR2-202ENST00000346997 FSD1Q9BTV5 496 aa12.48□□□□□ -0.41
FGFR2-202ENST00000346997 LSG1Q9H089 658 aaKnown RBP12.48□□□□□ -0.41
FGFR2-202ENST00000346997 BCL9O00512 1426 aa12.48□□□□□ -0.41
FGFR2-202ENST00000346997 DDX11L8A8MPP1 907 aa12.48□□□□□ -0.41
FGFR2-202ENST00000346997 SSFA2P28290 1259 aa12.48□□□□□ -0.41
FGFR2-202ENST00000346997 POM121Q96HA1 1249 aa12.48□□□□□ -0.41
FGFR2-202ENST00000346997 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
FGFR2-202ENST00000346997 RBM47A0AV96 593 aaKnown RBP12.47□□□□□ -0.41
FGFR2-202ENST00000346997 KCNQ2O43526 872 aa12.47□□□□□ -0.41
FGFR2-202ENST00000346997 TMX3Q96JJ7 454 aa12.47□□□□□ -0.41
FGFR2-202ENST00000346997 PLSCR2Q9NRY7 297 aa12.47□□□□□ -0.41
FGFR2-202ENST00000346997 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
FGFR2-202ENST00000346997 MCM2P49736 904 aa12.47□□□□□ -0.41
FGFR2-202ENST00000346997 TCIRG1Q13488 830 aa12.47□□□□□ -0.41
FGFR2-202ENST00000346997 MCM6Q14566 821 aa12.47□□□□□ -0.41
FGFR2-202ENST00000346997 NME8Q8N427 588 aa12.47□□□□□ -0.41
FGFR2-202ENST00000346997 FAM227BQ96M60 508 aa12.47□□□□□ -0.41
FGFR2-202ENST00000346997 TJP1Q07157 1748 aa12.47□□□□□ -0.41
FGFR2-202ENST00000346997 GIMAP6Q6P9H5 292 aa12.46□□□□□ -0.41
FGFR2-202ENST00000346997 PTF1AQ7RTS3 328 aa12.46□□□□□ -0.41
FGFR2-202ENST00000346997 MRRFQ96E11 262 aaKnown RBP12.46□□□□□ -0.41
FGFR2-202ENST00000346997 EDC3Q96F86 508 aaKnown RBP12.46□□□□□ -0.41
FGFR2-202ENST00000346997 HIP1O00291 1037 aa12.46□□□□□ -0.42
FGFR2-202ENST00000346997 NMIQ13287 307 aaPredicted RBP12.46□□□□□ -0.42
FGFR2-202ENST00000346997 FAM196AQ6ZSG2 479 aa12.46□□□□□ -0.42
FGFR2-202ENST00000346997 SND1Q7KZF4 910 aaKnown RBP eCLIP12.46□□□□□ -0.42
FGFR2-202ENST00000346997 ZNF594Q96JF6 807 aaPredicted RBP12.46□□□□□ -0.42
FGFR2-202ENST00000346997 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.42
FGFR2-202ENST00000346997 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.42
FGFR2-202ENST00000346997 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.42
FGFR2-202ENST00000346997 SNX14Q9Y5W7 946 aa12.46□□□□□ -0.42
FGFR2-202ENST00000346997 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.42
FGFR2-202ENST00000346997 FOSBP53539 338 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 PTH1RQ03431 593 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
FGFR2-202ENST00000346997 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 NEUROD6Q96NK8 337 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 PPP1R1BQ9UD71 204 aaPredicted RBP12.45□□□□□ -0.42
FGFR2-202ENST00000346997 TRIM37O94972 964 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 GPTP24298 496 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 KCNJ4P48050 445 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 NUCB2P80303 420 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 PKP1Q13835 747 aa12.45□□□□□ -0.42
FGFR2-202ENST00000346997 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
FGFR2-202ENST00000346997 CYP19A1P11511 503 aaPredicted RBP12.44□□□□□ -0.42
FGFR2-202ENST00000346997 ATP5JP18859 108 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 KRI1Q8N9T8 703 aaKnown RBP12.44□□□□□ -0.42
FGFR2-202ENST00000346997 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
FGFR2-202ENST00000346997 ZBTB1Q9Y2K1 713 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 CCDC171Q6TFL3 1326 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 MAP3K15Q6ZN16 1313 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 A0A0D9SFI3 127 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 HLFQ16534 295 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 CCDC57Q2TAC2 916 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 LRRC24Q50LG9 513 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
FGFR2-202ENST00000346997 ATG9AQ7Z3C6 839 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 IL17RAQ96F46 866 aa12.44□□□□□ -0.42
FGFR2-202ENST00000346997 CLCN1P35523 988 aa12.43□□□□□ -0.42
FGFR2-202ENST00000346997 IL15P40933 162 aaPredicted RBP12.43□□□□□ -0.42
FGFR2-202ENST00000346997 IVNS1ABPQ9Y6Y0 642 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms