RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 GCKRQ14397 625 aa22.65■■□□□ 1.22
CKLF-202ENST00000345436 UBE3BQ7Z3V4 1068 aa22.65■■□□□ 1.22
CKLF-202ENST00000345436 TTLL11Q8NHH1 800 aa22.65■■□□□ 1.22
CKLF-202ENST00000345436 DBNDD1Q9H9R9 158 aa22.65■■□□□ 1.22
CKLF-202ENST00000345436 ABT1Q9ULW3 272 aaKnown RBP22.65■■□□□ 1.22
CKLF-202ENST00000345436 CNTNAP1P78357 1384 aa22.64■■□□□ 1.22
CKLF-202ENST00000345436 IGHMBP2P38935 993 aaKnown RBP22.64■■□□□ 1.21
CKLF-202ENST00000345436 DEFB115Q30KQ5 88 aa22.64■■□□□ 1.21
CKLF-202ENST00000345436 BSDC1Q9NW68 430 aaPredicted RBP22.64■■□□□ 1.21
CKLF-202ENST00000345436 YDJCA8MPS7 323 aa22.63■■□□□ 1.21
CKLF-202ENST00000345436 DOK7Q18PE1 504 aa22.63■■□□□ 1.21
CKLF-202ENST00000345436 PSMD14O00487 310 aa22.62■■□□□ 1.21
CKLF-202ENST00000345436 PLA2G12BQ9BX93 195 aa22.62■■□□□ 1.21
CKLF-202ENST00000345436 RTL9Q8NET4 1388 aa22.62■■□□□ 1.21
CKLF-202ENST00000345436 HSPA1AP0DMV8 641 aaKnown RBP22.61■■□□□ 1.21
CKLF-202ENST00000345436 HSPA1BP0DMV9 641 aaKnown RBP22.61■■□□□ 1.21
CKLF-202ENST00000345436 CDC37L1Q7L3B6 337 aa22.61■■□□□ 1.21
CKLF-202ENST00000345436 MICALL2Q8IY33 904 aa22.61■■□□□ 1.21
CKLF-202ENST00000345436 MPHOSPH8Q99549 860 aa22.61■■□□□ 1.21
CKLF-202ENST00000345436 GREM2Q9H772 168 aa22.61■■□□□ 1.21
CKLF-202ENST00000345436 PGAP2Q9UHJ9 254 aa22.61■■□□□ 1.21
CKLF-202ENST00000345436 LRRC37AA6NMS7 1700 aa22.6■■□□□ 1.21
CKLF-202ENST00000345436 AIDAQ96BJ3 306 aa22.6■■□□□ 1.21
CKLF-202ENST00000345436 ANKRD2Q9GZV1 360 aa22.6■■□□□ 1.21
CKLF-202ENST00000345436 RASSF10A6NK89 507 aa22.59■■□□□ 1.21
CKLF-202ENST00000345436 ECE1P42892 770 aa22.59■■□□□ 1.21
CKLF-202ENST00000345436 PODNQ7Z5L7 613 aa22.59■■□□□ 1.21
CKLF-202ENST00000345436 ZBTB12Q9Y330 459 aaPredicted RBP22.59■■□□□ 1.21
CKLF-202ENST00000345436 TAF1P21675 1872 aa22.59■■□□□ 1.21
CKLF-202ENST00000345436 ADAMTSL1Q8N6G6 1762 aa22.58■■□□□ 1.21
CKLF-202ENST00000345436 VIL1P09327 827 aaKnown RBP22.58■■□□□ 1.21
CKLF-202ENST00000345436 VEGFBP49765 207 aa22.58■■□□□ 1.21
CKLF-202ENST00000345436 MINPP1Q9UNW1 487 aa22.58■■□□□ 1.21
CKLF-202ENST00000345436 LEMD3Q9Y2U8 911 aa22.58■■□□□ 1.21
CKLF-202ENST00000345436 SPINK5Q9NQ38 1064 aaPredicted RBP22.57■■□□□ 1.2
CKLF-202ENST00000345436 DUOX1Q9NRD9 1551 aa22.57■■□□□ 1.2
CKLF-202ENST00000345436 ANKRD18BA2A2Z9 1011 aa22.56■■□□□ 1.2
CKLF-202ENST00000345436 E9PSI1 815 aa22.56■■□□□ 1.2
CKLF-202ENST00000345436 CSF1RP07333 972 aa22.56■■□□□ 1.2
CKLF-202ENST00000345436 ITGA6P23229 1130 aa22.56■■□□□ 1.2
CKLF-202ENST00000345436 AGBL3Q8NEM8 1001 aa22.56■■□□□ 1.2
CKLF-202ENST00000345436 GPR101Q96P66 508 aaPredicted RBP22.56■■□□□ 1.2
CKLF-202ENST00000345436 CACNA1FO60840 1977 aa22.56■■□□□ 1.2
CKLF-202ENST00000345436 CCT4P50991 539 aaKnown RBP22.55■■□□□ 1.2
CKLF-202ENST00000345436 PAXIP1Q6ZW49 1069 aaPredicted RBP22.55■■□□□ 1.2
CKLF-202ENST00000345436 DCPSQ96C86 337 aaKnown RBP22.55■■□□□ 1.2
CKLF-202ENST00000345436 C9orf78Q9NZ63 289 aaPredicted RBP22.55■■□□□ 1.2
CKLF-202ENST00000345436 LTBP1Q14766 1721 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 USP17L3A6NCW0 530 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 USP17L4A6NCW7 530 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 TRAF5O00463 557 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 ALDH1L1O75891 902 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 CELF2O95319 508 aaKnown RBP22.54■■□□□ 1.2
CKLF-202ENST00000345436 KCNJ4P48050 445 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 HIRAP54198 1017 aaPredicted RBP22.54■■□□□ 1.2
CKLF-202ENST00000345436 CASP7P55210 303 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 MAP2K1Q02750 393 aaPredicted RBP22.54■■□□□ 1.2
CKLF-202ENST00000345436 IFIT5Q13325 482 aaKnown RBP22.54■■□□□ 1.2
CKLF-202ENST00000345436 BEND3Q5T5X7 828 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 USP17L1Q7RTZ2 530 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 TRPM4Q8TD43 1214 aa22.54■■□□□ 1.2
CKLF-202ENST00000345436 WDR33Q9C0J8 1336 aaKnown RBP22.54■■□□□ 1.2
CKLF-202ENST00000345436 F6X3S4 739 aa22.53■■□□□ 1.2
CKLF-202ENST00000345436 TBC1D10BQ4KMP7 808 aaPredicted RBP22.53■■□□□ 1.2
CKLF-202ENST00000345436 RBM26Q5T8P6 1007 aaKnown RBP22.53■■□□□ 1.2
CKLF-202ENST00000345436 RSBN1LQ6PCB5 846 aaPredicted RBP22.53■■□□□ 1.2
CKLF-202ENST00000345436 SAMD7Q7Z3H4 446 aa22.53■■□□□ 1.2
CKLF-202ENST00000345436 GLIS2Q9BZE0 524 aaPredicted RBP22.53■■□□□ 1.2
CKLF-202ENST00000345436 COA1Q9GZY4 146 aa22.53■■□□□ 1.2
CKLF-202ENST00000345436 KCNQ5Q9NR82 932 aa22.53■■□□□ 1.2
CKLF-202ENST00000345436 CHMP3Q9Y3E7 222 aa22.53■■□□□ 1.2
CKLF-202ENST00000345436 MED23Q9ULK4 1368 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 MMP14P50281 582 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 FAM161AQ3B820 660 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 TAF7LQ5H9L4 462 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 CST9Q5W186 159 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 SLC4A10Q6U841 1118 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 BEGAINQ9BUH8 593 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 SRCIN1Q9C0H9 1055 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 TLL2Q9Y6L7 1015 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 ZNF521Q96K83 1311 aa22.52■■□□□ 1.2
CKLF-202ENST00000345436 GRM8O00222 908 aa22.51■■□□□ 1.19
CKLF-202ENST00000345436 CCDC57Q2TAC2 916 aa22.51■■□□□ 1.19
CKLF-202ENST00000345436 KIF4BQ2VIQ3 1234 aa22.51■■□□□ 1.19
CKLF-202ENST00000345436 KRT26Q7Z3Y9 468 aa22.51■■□□□ 1.19
CKLF-202ENST00000345436 ZNF408Q9H9D4 720 aa22.51■■□□□ 1.19
CKLF-202ENST00000345436 USP17L8P0C7I0 530 aa22.5■■□□□ 1.19
CKLF-202ENST00000345436 CTCFP49711 727 aaPredicted RBP22.5■■□□□ 1.19
CKLF-202ENST00000345436 USP48Q86UV5 1035 aa22.5■■□□□ 1.19
CKLF-202ENST00000345436 SULF1Q8IWU6 871 aa22.5■■□□□ 1.19
CKLF-202ENST00000345436 OGFOD1Q8N543 542 aa22.5■■□□□ 1.19
CKLF-202ENST00000345436 HHIPL1Q96JK4 782 aa22.5■■□□□ 1.19
CKLF-202ENST00000345436 CAPNS2Q96L46 248 aa22.5■■□□□ 1.19
CKLF-202ENST00000345436 ZNF804BA4D1E1 1349 aa22.5■■□□□ 1.19
CKLF-202ENST00000345436 COL13A1Q5TAT6 717 aaPredicted RBP22.49■■□□□ 1.19
CKLF-202ENST00000345436 MYO3BQ8WXR4 1341 aa22.49■■□□□ 1.19
CKLF-202ENST00000345436 SHTN1A0MZ66 631 aa22.48■■□□□ 1.19
CKLF-202ENST00000345436 ZNF280AP59817 542 aaPredicted RBP22.48■■□□□ 1.19
CKLF-202ENST00000345436 FMR1Q06787 632 aaKnown RBP eCLIP22.48■■□□□ 1.19
CKLF-202ENST00000345436 TNS4Q8IZW8 715 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms