RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CWF19L2Q2TBE0 894 aaKnown RBP12.58□□□□□ -0.4
RPL28-201ENST00000344063 MADDQ8WXG6 1647 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 KCNG4Q8TDN1 519 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
RPL28-201ENST00000344063 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 MAP3K12Q12852 859 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 MRPS27Q92552 414 aaKnown RBP12.57□□□□□ -0.4
RPL28-201ENST00000344063 CRACR2AQ9BSW2 395 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 ARAP3Q8WWN8 1544 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 CNNM3Q8NE01 707 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 ZBTB3Q9H5J0 574 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 ARFGAP3Q9NP61 516 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
RPL28-201ENST00000344063 RAI14Q9P0K7 980 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 ZCCHC11Q5TAX3 1644 aaKnown RBP12.57□□□□□ -0.4
RPL28-201ENST00000344063 TXLNBQ8N3L3 684 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
RPL28-201ENST00000344063 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
RPL28-201ENST00000344063 IL15P40933 162 aaPredicted RBP12.56□□□□□ -0.4
RPL28-201ENST00000344063 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
RPL28-201ENST00000344063 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
RPL28-201ENST00000344063 OSBPL3Q9H4L5 887 aa12.56□□□□□ -0.4
RPL28-201ENST00000344063 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
RPL28-201ENST00000344063 KIF5CO60282 957 aa12.56□□□□□ -0.4
RPL28-201ENST00000344063 IARSP41252 1262 aaKnown RBP12.56□□□□□ -0.4
RPL28-201ENST00000344063 LMBR1LQ6UX01 489 aa12.56□□□□□ -0.4
RPL28-201ENST00000344063 SSH3Q8TE77 659 aa12.56□□□□□ -0.4
RPL28-201ENST00000344063 CBX8Q9HC52 389 aa12.56□□□□□ -0.4
RPL28-201ENST00000344063 PALD1Q9ULE6 856 aa12.56□□□□□ -0.4
RPL28-201ENST00000344063 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
RPL28-201ENST00000344063 ANKRD18BA2A2Z9 1011 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 TM6SF1Q9BZW5 370 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 IBTKQ9P2D0 1353 aaPredicted RBP12.55□□□□□ -0.4
RPL28-201ENST00000344063 RNMTO43148 476 aaKnown RBP12.55□□□□□ -0.4
RPL28-201ENST00000344063 CAPN2P17655 700 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 HAND2P61296 217 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
RPL28-201ENST00000344063 CCDC82Q8N4S0 544 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 SRRTQ9BXP5 876 aaKnown RBP12.55□□□□□ -0.4
RPL28-201ENST00000344063 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
RPL28-201ENST00000344063 KLF18A0A0U1RQI7 1052 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
RPL28-201ENST00000344063 CDR1P51861 262 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 GABPB1Q06547 395 aaPredicted RBP12.55□□□□□ -0.4
RPL28-201ENST00000344063 SSRP1Q08945 709 aaKnown RBP12.55□□□□□ -0.4
RPL28-201ENST00000344063 SLC39A6Q13433 755 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 KRBA2Q6ZNG9 492 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
RPL28-201ENST00000344063 SPHKAPQ2M3C7 1700 aa12.55□□□□□ -0.4
RPL28-201ENST00000344063 GOLGA6L9A6NEM1 432 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 ATL3Q6DD88 541 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 CDK5RAP3Q96JB5 506 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 PLCD4Q9BRC7 762 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
RPL28-201ENST00000344063 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 RAD21O60216 631 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 DHX32Q7L7V1 743 aaKnown RBP12.54□□□□□ -0.4
RPL28-201ENST00000344063 IFNKQ9P0W0 207 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 METAP2P50579 478 aaKnown RBP eCLIP12.54□□□□□ -0.44e-6■■■■□ 26.2
RPL28-201ENST00000344063 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 BICC1Q9H694 974 aaKnown RBP12.54□□□□□ -0.4
RPL28-201ENST00000344063 UBASH3AP57075 661 aa12.54□□□□□ -0.4
RPL28-201ENST00000344063 SMARCC1Q92922 1105 aaPredicted RBP12.54□□□□□ -0.4
RPL28-201ENST00000344063 ZNF215Q9UL58 517 aaPredicted RBP12.54□□□□□ -0.4
RPL28-201ENST00000344063 NBPF7P0C2Y1 421 aaPredicted RBP12.53□□□□□ -0.4
RPL28-201ENST00000344063 RPS6KB1P23443 525 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 EPS15P42566 896 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 PAG1Q9NWQ8 432 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 SLC5A1P13866 664 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 ZNF75DP51815 510 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 CCDC181Q5TID7 509 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 ERO1AQ96HE7 468 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 GBP3Q9H0R5 595 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 VPS18Q9P253 973 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 CDC42BPBQ9Y5S2 1711 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 SYKP43405 635 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 MNAT1P51948 309 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 SLC27A2O14975 620 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 USP8P40818 1118 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 DNA2P51530 1060 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
RPL28-201ENST00000344063 STAP2Q9UGK3 403 aa12.53□□□□□ -0.4
RPL28-201ENST00000344063 TUBB4AP04350 444 aa12.52□□□□□ -0.4
RPL28-201ENST00000344063 TMEM67Q5HYA8 995 aa12.52□□□□□ -0.4
RPL28-201ENST00000344063 LUC7LQ9NQ29 371 aaKnown RBP12.52□□□□□ -0.4
RPL28-201ENST00000344063 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.4
RPL28-201ENST00000344063 ATP2B3Q16720 1220 aa12.52□□□□□ -0.41
RPL28-201ENST00000344063 MICU3Q86XE3 530 aa12.52□□□□□ -0.41
RPL28-201ENST00000344063 PUF60Q9UHX1 559 aaKnown RBP12.52□□□□□ -0.41
RPL28-201ENST00000344063 NRBP1Q9UHY1 535 aa12.52□□□□□ -0.41
RPL28-201ENST00000344063 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.41
RPL28-201ENST00000344063 GCP02774 474 aa12.52□□□□□ -0.41
RPL28-201ENST00000344063 KANK3Q6NY19 840 aa12.52□□□□□ -0.41
RPL28-201ENST00000344063 RASSF4Q9H2L5 321 aa12.52□□□□□ -0.41
RPL28-201ENST00000344063 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms