RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 WASHC4Q2M389 1173 aa16.41■□□□□ 0.22
HLA-DQA1-201ENST00000343139 DZIP1LQ8IYY4 767 aaKnown RBP16.41■□□□□ 0.22
HLA-DQA1-201ENST00000343139 CHMP3Q9Y3E7 222 aa16.41■□□□□ 0.22
HLA-DQA1-201ENST00000343139 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
HLA-DQA1-201ENST00000343139 LTBP1Q14766 1721 aa16.41■□□□□ 0.22
HLA-DQA1-201ENST00000343139 AOC3Q16853 763 aa16.4■□□□□ 0.22
HLA-DQA1-201ENST00000343139 FTSJ3Q8IY81 847 aaKnown RBP16.4■□□□□ 0.22
HLA-DQA1-201ENST00000343139 NIM1KQ8IY84 436 aa16.4■□□□□ 0.22
HLA-DQA1-201ENST00000343139 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
HLA-DQA1-201ENST00000343139 TIAM2Q8IVF5 1701 aa16.39■□□□□ 0.22
HLA-DQA1-201ENST00000343139 TAF1P21675 1872 aa16.39■□□□□ 0.21
HLA-DQA1-201ENST00000343139 C6orf229H3BNL8 230 aa16.39■□□□□ 0.21
HLA-DQA1-201ENST00000343139 CLUAP1Q96AJ1 413 aa16.39■□□□□ 0.21
HLA-DQA1-201ENST00000343139 L3MBTL3Q96JM7 780 aaPredicted RBP16.39■□□□□ 0.21
HLA-DQA1-201ENST00000343139 MEIS3Q99687 375 aa16.39■□□□□ 0.21
HLA-DQA1-201ENST00000343139 ZNRF3Q9ULT6 936 aa16.39■□□□□ 0.21
HLA-DQA1-201ENST00000343139 COL4A5P29400 1685 aa16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 UFL1O94874 794 aa16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 EIF6P56537 245 aaKnown RBP16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 GPC2Q8N158 579 aa16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 TMEM57Q8N5G2 664 aa16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 MTX1Q13505 466 aa16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 TAF7LQ5H9L4 462 aa16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 ZNF526Q8TF50 670 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 ZC3H12CQ9C0D7 883 aaKnown RBP16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 TNNQ9UQP3 1299 aa16.38■□□□□ 0.21
HLA-DQA1-201ENST00000343139 MED23Q9ULK4 1368 aa16.37■□□□□ 0.21
HLA-DQA1-201ENST00000343139 KIF3CO14782 793 aa16.37■□□□□ 0.21
HLA-DQA1-201ENST00000343139 CHRNDQ07001 517 aa16.37■□□□□ 0.21
HLA-DQA1-201ENST00000343139 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
HLA-DQA1-201ENST00000343139 ZNF541Q9H0D2 1346 aa16.37■□□□□ 0.21
HLA-DQA1-201ENST00000343139 VEGFAP15692 232 aaPredicted RBP16.36■□□□□ 0.21
HLA-DQA1-201ENST00000343139 C15orf52Q6ZUT6 534 aaKnown RBP16.36■□□□□ 0.21
HLA-DQA1-201ENST00000343139 NMRK2Q9NPI5 230 aa16.36■□□□□ 0.21
HLA-DQA1-201ENST00000343139 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
HLA-DQA1-201ENST00000343139 RIPOR2Q9Y4F9 1068 aa16.36■□□□□ 0.21
HLA-DQA1-201ENST00000343139 LRRFIP2Q9Y608 721 aaKnown RBP16.36■□□□□ 0.21
HLA-DQA1-201ENST00000343139 WDR90Q96KV7 1748 aa16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 DDNO94850 711 aaPredicted RBP16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 GNAI2P04899 355 aa16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 RLBP1P12271 317 aa16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 ZNF594Q96JF6 807 aaPredicted RBP16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 ZNF804BA4D1E1 1349 aa16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 MROH5Q6ZUA9 1318 aa16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 CCDC88AQ3V6T2 1871 aa16.35■□□□□ 0.21
HLA-DQA1-201ENST00000343139 IQCA1LA6NCM1 817 aa16.34■□□□□ 0.21
HLA-DQA1-201ENST00000343139 POTECB2RU33 542 aa16.34■□□□□ 0.21
HLA-DQA1-201ENST00000343139 ZBTB7BO15156 539 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQA1-201ENST00000343139 TNIP1Q15025 636 aa16.34■□□□□ 0.21
HLA-DQA1-201ENST00000343139 PODNQ7Z5L7 613 aa16.34■□□□□ 0.21
HLA-DQA1-201ENST00000343139 PTPN12Q05209 780 aaKnown RBP16.34■□□□□ 0.21
HLA-DQA1-201ENST00000343139 CXCL9Q07325 125 aa16.34■□□□□ 0.21
HLA-DQA1-201ENST00000343139 PDE3AQ14432 1141 aa16.34■□□□□ 0.21
HLA-DQA1-201ENST00000343139 RRAGCQ9HB90 399 aa16.34■□□□□ 0.21
HLA-DQA1-201ENST00000343139 YDJCA8MPS7 323 aa16.33■□□□□ 0.2
HLA-DQA1-201ENST00000343139 RIMBP2O15034 1052 aa16.33■□□□□ 0.2
HLA-DQA1-201ENST00000343139 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
HLA-DQA1-201ENST00000343139 ITPRIPQ8IWB1 547 aa16.33■□□□□ 0.2
HLA-DQA1-201ENST00000343139 YTHDC1Q96MU7 727 aaKnown RBP16.33■□□□□ 0.2
HLA-DQA1-201ENST00000343139 COPRSQ9NQ92 184 aa16.33■□□□□ 0.2
HLA-DQA1-201ENST00000343139 ECE2O60344 883 aa16.32■□□□□ 0.2
HLA-DQA1-201ENST00000343139 CIAO1O76071 339 aa16.32■□□□□ 0.2
HLA-DQA1-201ENST00000343139 TOMM70O94826 608 aa16.32■□□□□ 0.2
HLA-DQA1-201ENST00000343139 UBE4AQ14139 1066 aa16.32■□□□□ 0.2
HLA-DQA1-201ENST00000343139 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
HLA-DQA1-201ENST00000343139 CHMP4BQ9H444 224 aaKnown RBP16.32■□□□□ 0.2
HLA-DQA1-201ENST00000343139 IRS2Q9Y4H2 1338 aa16.32■□□□□ 0.2
HLA-DQA1-201ENST00000343139 EYA2O00167 538 aa16.31■□□□□ 0.2
HLA-DQA1-201ENST00000343139 KCNJ4P48050 445 aa16.31■□□□□ 0.2
HLA-DQA1-201ENST00000343139 GPR101Q96P66 508 aaPredicted RBP16.31■□□□□ 0.2
HLA-DQA1-201ENST00000343139 PUS3Q9BZE2 481 aaKnown RBP16.31■□□□□ 0.2
HLA-DQA1-201ENST00000343139 DBNDD1Q9H9R9 158 aa16.31■□□□□ 0.2
HLA-DQA1-201ENST00000343139 ZNF609O15014 1411 aa16.31■□□□□ 0.2
HLA-DQA1-201ENST00000343139 WTIPA6NIX2 430 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 G3V3G9 751 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 C16orf71Q8IYS4 520 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 VGLL2Q8N8G2 317 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 RBM46Q8TBY0 533 aaKnown RBP16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 HACL1Q9UJ83 578 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 DDX19BQ9UMR2 479 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 SRGAP3O43295 1099 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 TAF5LO75529 589 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 PDE8BO95263 885 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 RPS12P25398 132 aaKnown RBP16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 LRRC24Q50LG9 513 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 DPF2Q92785 391 aa16.3■□□□□ 0.2
HLA-DQA1-201ENST00000343139 RAD17O75943 681 aa16.29■□□□□ 0.2
HLA-DQA1-201ENST00000343139 VIL1P09327 827 aaKnown RBP16.29■□□□□ 0.2
HLA-DQA1-201ENST00000343139 SCNN1DP51172 638 aa16.29■□□□□ 0.2
HLA-DQA1-201ENST00000343139 METTL24Q5JXM2 366 aa16.29■□□□□ 0.2
HLA-DQA1-201ENST00000343139 ATG9AQ7Z3C6 839 aa16.29■□□□□ 0.2
HLA-DQA1-201ENST00000343139 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQA1-201ENST00000343139 HELBQ8NG08 1087 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms