RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 KIAA1524Q8TCG1 905 aa28.39■■■□□ 2.14
NELFB-201ENST00000343053 CYP27B1O15528 508 aa28.38■■■□□ 2.13
NELFB-201ENST00000343053 TIMM10P62072 90 aa28.38■■■□□ 2.13
NELFB-201ENST00000343053 GUCY1B3Q02153 619 aa28.38■■■□□ 2.13
NELFB-201ENST00000343053 USPL1Q5W0Q7 1092 aa28.38■■■□□ 2.13
NELFB-201ENST00000343053 APOBRQ0VD83 1088 aa28.38■■■□□ 2.13
NELFB-201ENST00000343053 NCOA5Q9HCD5 579 aaKnown RBP28.38■■■□□ 2.13
NELFB-201ENST00000343053 SCN11AQ9UI33 1791 aa28.38■■■□□ 2.13
NELFB-201ENST00000343053 RESTQ13127 1097 aa28.37■■■□□ 2.13
NELFB-201ENST00000343053 MCMDC2Q4G0Z9 681 aa28.37■■■□□ 2.13
NELFB-201ENST00000343053 SPTLC3Q9NUV7 552 aa28.37■■■□□ 2.13
NELFB-201ENST00000343053 MRC1P22897 1456 aa28.37■■■□□ 2.13
NELFB-201ENST00000343053 CCDC186Q7Z3E2 898 aa28.36■■■□□ 2.13
NELFB-201ENST00000343053 TRIM5Q9C035 493 aa28.36■■■□□ 2.13
NELFB-201ENST00000343053 KRT32Q14532 448 aa28.36■■■□□ 2.13
NELFB-201ENST00000343053 IFNL2Q8IZJ0 200 aa28.36■■■□□ 2.13
NELFB-201ENST00000343053 ZNF594Q96JF6 807 aaPredicted RBP28.36■■■□□ 2.13
NELFB-201ENST00000343053 CLSTN2Q9H4D0 955 aa28.36■■■□□ 2.13
NELFB-201ENST00000343053 CAMTA1Q9Y6Y1 1673 aa28.36■■■□□ 2.13
NELFB-201ENST00000343053 ZNF710Q8N1W2 664 aa28.36■■■□□ 2.13
NELFB-201ENST00000343053 TSGA10IPQ3SY00 556 aa28.35■■■□□ 2.13
NELFB-201ENST00000343053 FBXW7Q969H0 707 aa28.35■■■□□ 2.13
NELFB-201ENST00000343053 HAUS7Q99871 368 aa28.35■■■□□ 2.13
NELFB-201ENST00000343053 U3KPZ7 1027 aaPredicted RBP28.35■■■□□ 2.13
NELFB-201ENST00000343053 TRPM3Q9HCF6 1732 aaPredicted RBP28.34■■■□□ 2.13
NELFB-201ENST00000343053 ERCC4Q92889 916 aaPredicted RBP28.34■■■□□ 2.13
NELFB-201ENST00000343053 FMNL2Q96PY5 1086 aa28.34■■■□□ 2.13
NELFB-201ENST00000343053 BCL11BQ9C0K0 894 aaPredicted RBP28.34■■■□□ 2.13
NELFB-201ENST00000343053 DDX19AQ9NUU7 478 aaKnown RBP28.34■■■□□ 2.13
NELFB-201ENST00000343053 PRIMPOLQ96LW4 560 aa28.33■■■□□ 2.13
NELFB-201ENST00000343053 ADAMTS7Q9UKP4 1686 aa28.33■■■□□ 2.13
NELFB-201ENST00000343053 GOLGA6L6A8MZA4 724 aa28.33■■■□□ 2.13
NELFB-201ENST00000343053 ZNF165P49910 485 aa28.33■■■□□ 2.13
NELFB-201ENST00000343053 CABP4P57796 275 aa28.33■■■□□ 2.13
NELFB-201ENST00000343053 TTLL7Q6ZT98 887 aa28.33■■■□□ 2.13
NELFB-201ENST00000343053 MAP7D2Q96T17 732 aa28.33■■■□□ 2.13
NELFB-201ENST00000343053 ALDH8A1Q9H2A2 487 aaPredicted RBP28.33■■■□□ 2.13
NELFB-201ENST00000343053 RABL6Q3YEC7 729 aaPredicted RBP28.32■■■□□ 2.12
NELFB-201ENST00000343053 TAOK2Q9UL54 1235 aa28.32■■■□□ 2.12
NELFB-201ENST00000343053 KBTBD3Q8NAB2 608 aa28.31■■■□□ 2.12
NELFB-201ENST00000343053 LRRC24Q50LG9 513 aa28.31■■■□□ 2.12
NELFB-201ENST00000343053 ZBTB3Q9H5J0 574 aa28.31■■■□□ 2.12
NELFB-201ENST00000343053 PRDM10Q9NQV6 1147 aa28.31■■■□□ 2.12
NELFB-201ENST00000343053 PAG1Q9NWQ8 432 aa28.31■■■□□ 2.12
NELFB-201ENST00000343053 ARFGEF2Q9Y6D5 1785 aa28.31■■■□□ 2.12
NELFB-201ENST00000343053 PTPDC1A2A3K4 754 aa28.3■■■□□ 2.12
NELFB-201ENST00000343053 CCDC85AQ96PX6 553 aaPredicted RBP28.3■■■□□ 2.12
NELFB-201ENST00000343053 LAMA4Q16363 1823 aa28.3■■■□□ 2.12
NELFB-201ENST00000343053 CTDNEP1O95476 244 aa28.3■■■□□ 2.12
NELFB-201ENST00000343053 TTLL5Q6EMB2 1281 aa28.3■■■□□ 2.12
NELFB-201ENST00000343053 RIOK3O14730 519 aaKnown RBP28.29■■■□□ 2.12
NELFB-201ENST00000343053 CASP7P55210 303 aa28.29■■■□□ 2.12
NELFB-201ENST00000343053 HMGN5P82970 282 aaKnown RBP28.29■■■□□ 2.12
NELFB-201ENST00000343053 HSP90AB3PQ58FF7 597 aa28.29■■■□□ 2.12
NELFB-201ENST00000343053 NSUN7Q8NE18 718 aaKnown RBP28.29■■■□□ 2.12
NELFB-201ENST00000343053 C16orf45Q96MC5 204 aaPredicted RBP28.29■■■□□ 2.12
NELFB-201ENST00000343053 KIF3AQ9Y496 699 aa28.29■■■□□ 2.12
NELFB-201ENST00000343053 C1orf167Q5SNV9 1468 aa28.29■■■□□ 2.12
NELFB-201ENST00000343053 GPHNQ9NQX3 736 aaPredicted RBP28.29■■■□□ 2.12
NELFB-201ENST00000343053 ZNF330Q9Y3S2 320 aaPredicted RBP28.29■■■□□ 2.12
NELFB-201ENST00000343053 NBPF26B4DH59 902 aa28.28■■■□□ 2.12
NELFB-201ENST00000343053 NBPF14Q5TI25 921 aa28.28■■■□□ 2.12
NELFB-201ENST00000343053 NBPF10Q6P3W6 841 aaKnown RBP28.28■■■□□ 2.12
NELFB-201ENST00000343053 C11orf57Q6ZUT1 292 aaPredicted RBP28.28■■■□□ 2.12
NELFB-201ENST00000343053 RAB11FIP4Q86YS3 637 aa28.28■■■□□ 2.12
NELFB-201ENST00000343053 NBPF15Q8N660 670 aa28.28■■■□□ 2.12
NELFB-201ENST00000343053 DCAF5Q96JK2 942 aa28.28■■■□□ 2.12
NELFB-201ENST00000343053 GOLPH3LQ9H4A5 285 aa28.28■■■□□ 2.12
NELFB-201ENST00000343053 ZNF75DP51815 510 aa28.27■■■□□ 2.12
NELFB-201ENST00000343053 FOXO4P98177 505 aa28.27■■■□□ 2.12
NELFB-201ENST00000343053 ATG9AQ7Z3C6 839 aa28.27■■■□□ 2.12
NELFB-201ENST00000343053 BCL2L12Q9HB09 334 aa28.27■■■□□ 2.12
NELFB-201ENST00000343053 A1BGP04217 495 aa28.26■■■□□ 2.12
NELFB-201ENST00000343053 PLBD2Q8NHP8 589 aa28.26■■■□□ 2.12
NELFB-201ENST00000343053 USP28Q96RU2 1077 aa28.26■■■□□ 2.12
NELFB-201ENST00000343053 HAND2P61296 217 aa28.26■■■□□ 2.11
NELFB-201ENST00000343053 DHX32Q7L7V1 743 aaKnown RBP28.26■■■□□ 2.11
NELFB-201ENST00000343053 CCAR1Q8IX12 1150 aaKnown RBP28.26■■■□□ 2.11
NELFB-201ENST00000343053 PUS3Q9BZE2 481 aaKnown RBP28.26■■■□□ 2.11
NELFB-201ENST00000343053 CCDC144BQ3MJ40 725 aa28.26■■■□□ 2.11
NELFB-201ENST00000343053 CCDC144CPQ8IYA2 1237 aa28.26■■■□□ 2.11
NELFB-201ENST00000343053 OTUD7BQ6GQQ9 843 aa28.25■■■□□ 2.11
NELFB-201ENST00000343053 PDIA4P13667 645 aaKnown RBP28.25■■■□□ 2.11
NELFB-201ENST00000343053 ARID5BQ14865 1188 aa28.25■■■□□ 2.11
NELFB-201ENST00000343053 RBM43Q6ZSC3 357 aaKnown RBP28.25■■■□□ 2.11
NELFB-201ENST00000343053 CLIP2Q9UDT6 1046 aa28.25■■■□□ 2.11
NELFB-201ENST00000343053 E7EWF7 191 aa28.24■■■□□ 2.11
NELFB-201ENST00000343053 PFKFB2O60825 505 aa28.24■■■□□ 2.11
NELFB-201ENST00000343053 ADD1P35611 737 aaKnown RBP28.24■■■□□ 2.11
NELFB-201ENST00000343053 HSPD1P10809 573 aaKnown RBP28.24■■■□□ 2.11
NELFB-201ENST00000343053 FKBP4Q02790 459 aaKnown RBP eCLIP28.24■■■□□ 2.11
NELFB-201ENST00000343053 CHAF1AQ13111 956 aaPredicted RBP28.24■■■□□ 2.11
NELFB-201ENST00000343053 SMARCC2Q8TAQ2 1214 aa28.24■■■□□ 2.11
NELFB-201ENST00000343053 MAST3O60307 1309 aa28.23■■■□□ 2.11
NELFB-201ENST00000343053 PLA2G4DQ86XP0 818 aa28.23■■■□□ 2.11
NELFB-201ENST00000343053 TDRD7Q8NHU6 1098 aaKnown RBP28.23■■■□□ 2.11
NELFB-201ENST00000343053 CFAP45Q9UL16 551 aa28.23■■■□□ 2.11
NELFB-201ENST00000343053 SH3TC1Q8TE82 1336 aa28.23■■■□□ 2.11
NELFB-201ENST00000343053 IFIT1P09914 478 aaKnown RBP28.23■■■□□ 2.11
NELFB-201ENST00000343053 M0R2C6 588 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 566.5 ms