RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 CCDC24Q8N4L8 307 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 TTLL11Q8NHH1 800 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 XAGE2Q96GT9 111 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 HAUS7Q99871 368 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 TOGARAM1Q9Y4F4 1720 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 COL15A1P39059 1388 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 TAF5LO75529 589 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 TTC39AQ5SRH9 613 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 TAOK2Q9UL54 1235 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 HIP1O00291 1037 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 CAVIN1Q6NZI2 390 aaKnown RBP13.24□□□□□ -0.29
TRIM29-201ENST00000341846 TTC14Q96N46 770 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 NAP1L2Q9ULW6 460 aaPredicted RBP13.24□□□□□ -0.29
TRIM29-201ENST00000341846 LIMCH1Q9UPQ0 1083 aa13.24□□□□□ -0.29
TRIM29-201ENST00000341846 NASPP49321 788 aaPredicted RBP13.23□□□□□ -0.29
TRIM29-201ENST00000341846 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
TRIM29-201ENST00000341846 DISP2A7MBM2 1401 aa13.23□□□□□ -0.29
TRIM29-201ENST00000341846 CHST3Q7LGC8 479 aa13.23□□□□□ -0.29
TRIM29-201ENST00000341846 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
TRIM29-201ENST00000341846 CYP2E1P05181 493 aaPredicted RBP13.23□□□□□ -0.29
TRIM29-201ENST00000341846 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
TRIM29-201ENST00000341846 INTS5Q6P9B9 1019 aaKnown RBP13.23□□□□□ -0.29
TRIM29-201ENST00000341846 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.23□□□□□ -0.29
TRIM29-201ENST00000341846 KBTBD3Q8NAB2 608 aa13.23□□□□□ -0.29
TRIM29-201ENST00000341846 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 CTSWP56202 376 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 CUL4AQ13619 759 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 ME3Q16798 604 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 CCDC158Q5M9N0 1113 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
TRIM29-201ENST00000341846 CCDC87Q9NVE4 849 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 NIP7Q9Y221 180 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM29-201ENST00000341846 SPATA31A5Q5VU36 1347 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 SPATA31A7Q8IWB4 1347 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 ZAP70P43403 619 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 MCMDC2Q4G0Z9 681 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 TTLL5Q6EMB2 1281 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 BLOC1S2Q6QNY1 142 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 ANP32BQ92688 251 aaKnown RBP13.22□□□□□ -0.29
TRIM29-201ENST00000341846 TPCN1Q9ULQ1 816 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 NSFL1CQ9UNZ2 370 aaKnown RBP13.22□□□□□ -0.29
TRIM29-201ENST00000341846 SMC3Q9UQE7 1217 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 PLEKHG2Q9H7P9 1386 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 ZNF609O15014 1411 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 TUBGCP6Q96RT7 1819 aa13.22□□□□□ -0.29
TRIM29-201ENST00000341846 ANKRD18BA2A2Z9 1011 aa13.21□□□□□ -0.29
TRIM29-201ENST00000341846 HAND2P61296 217 aa13.21□□□□□ -0.29
TRIM29-201ENST00000341846 IL6STP40189 918 aaPredicted RBP13.21□□□□□ -0.29
TRIM29-201ENST00000341846 ATP2B3Q16720 1220 aa13.21□□□□□ -0.29
TRIM29-201ENST00000341846 VPS37CA5D8V6 355 aaPredicted RBP13.21□□□□□ -0.3
TRIM29-201ENST00000341846 FOSBP53539 338 aa13.21□□□□□ -0.3
TRIM29-201ENST00000341846 RNF20Q5VTR2 975 aa13.21□□□□□ -0.3
TRIM29-201ENST00000341846 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.3
TRIM29-201ENST00000341846 IQSEC3Q9UPP2 1182 aaPredicted RBP13.21□□□□□ -0.3
TRIM29-201ENST00000341846 CYP21A2P08686 494 aa13.2□□□□□ -0.3
TRIM29-201ENST00000341846 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
TRIM29-201ENST00000341846 FERMT3Q86UX7 667 aa13.2□□□□□ -0.3
TRIM29-201ENST00000341846 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
TRIM29-201ENST00000341846 EIF5P55010 431 aaKnown RBP13.2□□□□□ -0.3
TRIM29-201ENST00000341846 CCDC173Q0VFZ6 552 aa13.2□□□□□ -0.3
TRIM29-201ENST00000341846 LMBRD1Q9NUN5 540 aa13.2□□□□□ -0.3
TRIM29-201ENST00000341846 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
TRIM29-201ENST00000341846 CSF1RP07333 972 aa13.19□□□□□ -0.3
TRIM29-201ENST00000341846 HSP90B1P14625 803 aaKnown RBP13.19□□□□□ -0.3
TRIM29-201ENST00000341846 GJB2P29033 226 aa13.19□□□□□ -0.3
TRIM29-201ENST00000341846 WTIPA6NIX2 430 aaPredicted RBP13.19□□□□□ -0.3
TRIM29-201ENST00000341846 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
TRIM29-201ENST00000341846 OSBP2Q969R2 916 aa13.19□□□□□ -0.3
TRIM29-201ENST00000341846 MED23Q9ULK4 1368 aa13.19□□□□□ -0.3
TRIM29-201ENST00000341846 BRD1O95696 1058 aa13.19□□□□□ -0.3
TRIM29-201ENST00000341846 SYT1P21579 422 aa13.19□□□□□ -0.3
TRIM29-201ENST00000341846 M0R2C6 588 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 FAM173BQ6P4H8 233 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 SMAP1Q8IYB5 467 aaPredicted RBP13.18□□□□□ -0.3
TRIM29-201ENST00000341846 RIPOR2Q9Y4F9 1068 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 COL16A1Q07092 1604 aaPredicted RBP13.18□□□□□ -0.3
TRIM29-201ENST00000341846 PDE8AO60658 829 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 GTF2E1P29083 439 aaPredicted RBP13.18□□□□□ -0.3
TRIM29-201ENST00000341846 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
TRIM29-201ENST00000341846 MPHOSPH8Q99549 860 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 CIAO1O76071 339 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 PHKA1P46020 1223 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 ST3GAL1Q11201 340 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 GPT2Q8TD30 523 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 DDX11Q96FC9 970 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 MAP7D2Q96T17 732 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 CDCA7Q9BWT1 371 aaPredicted RBP13.18□□□□□ -0.3
TRIM29-201ENST00000341846 AKAP2Q9Y2D5 859 aa13.18□□□□□ -0.3
TRIM29-201ENST00000341846 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
TRIM29-201ENST00000341846 MAST3O60307 1309 aa13.17□□□□□ -0.3
TRIM29-201ENST00000341846 PSMA5P28066 241 aa13.17□□□□□ -0.3
TRIM29-201ENST00000341846 MCAMP43121 646 aa13.17□□□□□ -0.3
TRIM29-201ENST00000341846 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
TRIM29-201ENST00000341846 STK11IPQ8N1F8 1099 aa13.17□□□□□ -0.3
TRIM29-201ENST00000341846 NEK1Q96PY6 1258 aa13.17□□□□□ -0.3
TRIM29-201ENST00000341846 USP21Q9UK80 565 aa13.17□□□□□ -0.3
TRIM29-201ENST00000341846 ISY1Q9ULR0 285 aaKnown RBP13.17□□□□□ -0.3
TRIM29-201ENST00000341846 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
TRIM29-201ENST00000341846 ITGB4P16144 1822 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms