RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 DHX32Q7L7V1 743 aaKnown RBP13.62□□□□□ -0.23
TRAK1-202ENST00000341421 SLC52A2Q9HAB3 445 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 TMEM131LA2VDJ0 1609 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 ANKRD18BA2A2Z9 1011 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 CPA1P15085 419 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 PIP4K2AP48426 406 aaPredicted RBP13.62□□□□□ -0.23
TRAK1-202ENST00000341421 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 TFCP2Q12800 502 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 GCKRQ14397 625 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 BMS1Q14692 1282 aaKnown RBP13.62□□□□□ -0.23
TRAK1-202ENST00000341421 ATP2B3Q16720 1220 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 ZCRB1Q8TBF4 217 aaKnown RBP13.62□□□□□ -0.23
TRAK1-202ENST00000341421 IPO7O95373 1038 aaKnown RBP13.61□□□□□ -0.23
TRAK1-202ENST00000341421 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
TRAK1-202ENST00000341421 POLA2Q14181 598 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 FILIP1LQ4L180 1135 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 CEP135Q66GS9 1140 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 HELLSQ9NRZ9 838 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 CCDC186Q7Z3E2 898 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 PLCD3Q8N3E9 789 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 PLBD2Q8NHP8 589 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 LLPHQ9BRT6 129 aaKnown RBP13.61□□□□□ -0.23
TRAK1-202ENST00000341421 LSG1Q9H089 658 aaKnown RBP13.61□□□□□ -0.23
TRAK1-202ENST00000341421 CCDC196A0A1B0GTZ2 297 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 TDO2P48775 406 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 ANO6Q4KMQ2 910 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 ORC3Q9UBD5 711 aaPredicted RBP13.61□□□□□ -0.23
TRAK1-202ENST00000341421 USP16Q9Y5T5 823 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 TECPR2O15040 1411 aa13.61□□□□□ -0.23
TRAK1-202ENST00000341421 SFPQP23246 707 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAK1-202ENST00000341421 AEBP2Q6ZN18 517 aaPredicted RBP13.6□□□□□ -0.23
TRAK1-202ENST00000341421 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
TRAK1-202ENST00000341421 CCDC85AQ96PX6 553 aaPredicted RBP13.6□□□□□ -0.23
TRAK1-202ENST00000341421 GUCY1B3Q02153 619 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 CHRNA2Q15822 529 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 PAXIP1Q6ZW49 1069 aaPredicted RBP13.6□□□□□ -0.23
TRAK1-202ENST00000341421 PDILTQ8N807 584 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 KCNG4Q8TDN1 519 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 AK7Q96M32 723 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 FAM227BQ96M60 508 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 CEP131Q9UPN4 1083 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 OVOS2A0A0J9YW53 1432 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 OVOS2Q6IE36 1432 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 CLTCQ00610 1675 aaKnown RBP13.6□□□□□ -0.23
TRAK1-202ENST00000341421 MAP3K12Q12852 859 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 UBAC1Q9BSL1 405 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 CRB1P82279 1406 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 ATP5JP18859 108 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 UNC5CLQ8IV45 518 aa13.6□□□□□ -0.23
TRAK1-202ENST00000341421 PTGS1P23219 599 aa13.59□□□□□ -0.23
TRAK1-202ENST00000341421 LDHAL6AQ6ZMR3 332 aa13.59□□□□□ -0.23
TRAK1-202ENST00000341421 IPO4Q8TEX9 1081 aaKnown RBP13.59□□□□□ -0.23
TRAK1-202ENST00000341421 NAPBQ9H115 298 aa13.59□□□□□ -0.23
TRAK1-202ENST00000341421 RNF113AO15541 343 aaKnown RBP13.59□□□□□ -0.23
TRAK1-202ENST00000341421 GADD45BO75293 160 aaPredicted RBP13.59□□□□□ -0.23
TRAK1-202ENST00000341421 ADGRL3Q9HAR2 1447 aa13.59□□□□□ -0.23
TRAK1-202ENST00000341421 MARCH6O60337 910 aa13.59□□□□□ -0.23
TRAK1-202ENST00000341421 GTF2F1P35269 517 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAK1-202ENST00000341421 IGHMBP2P38935 993 aaKnown RBP13.59□□□□□ -0.23
TRAK1-202ENST00000341421 SHPRHQ149N8 1683 aa13.59□□□□□ -0.23
TRAK1-202ENST00000341421 KCNQ3O43525 872 aa13.59□□□□□ -0.23
TRAK1-202ENST00000341421 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
TRAK1-202ENST00000341421 ATP2B1P20020 1258 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 TMCO3Q6UWJ1 677 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 MRPS27Q92552 414 aaKnown RBP13.58□□□□□ -0.24
TRAK1-202ENST00000341421 CPS1P31327 1500 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 NEURL1BA8MQ27 555 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 UQCRFS1P1P0C7P4 283 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 TXLNAP40222 546 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.58□□□□□ -0.24
TRAK1-202ENST00000341421 IFT172Q9UG01 1749 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 SLC5A1P13866 664 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 TMX4Q9H1E5 349 aaPredicted RBP13.58□□□□□ -0.24
TRAK1-202ENST00000341421 ATP10DQ9P241 1426 aa13.58□□□□□ -0.24
TRAK1-202ENST00000341421 KBTBD3Q8NAB2 608 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 RNF41Q9H4P4 317 aaPredicted RBP13.57□□□□□ -0.24
TRAK1-202ENST00000341421 TRMT112Q9UI30 125 aaKnown RBP13.57□□□□□ -0.24
TRAK1-202ENST00000341421 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 IRX3P78415 501 aaPredicted RBP13.57□□□□□ -0.24
TRAK1-202ENST00000341421 EAF2Q96CJ1 260 aaPredicted RBP13.57□□□□□ -0.24
TRAK1-202ENST00000341421 LRRC2Q9BYS8 371 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 NCAPD2Q15021 1401 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 ARHGEF25Q86VW2 580 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 UBXN4Q92575 508 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 LRP2BPQ9P2M1 347 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 CHAMP1Q96JM3 812 aa13.57□□□□□ -0.24
TRAK1-202ENST00000341421 PCDH11XQ9BZA7 1347 aa13.56□□□□□ -0.24
TRAK1-202ENST00000341421 PCDH11YQ9BZA8 1340 aa13.56□□□□□ -0.24
TRAK1-202ENST00000341421 PTPDC1A2A3K4 754 aa13.56□□□□□ -0.24
TRAK1-202ENST00000341421 PTH1RQ03431 593 aa13.56□□□□□ -0.24
TRAK1-202ENST00000341421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■□□□ 11.4
TRAK1-202ENST00000341421 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms