RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 TTC6Q86TZ1 520 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 STK11IPQ8N1F8 1099 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 SUPT20HQ8NEM7 779 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 C8orf37Q96NL8 207 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 STK24Q9Y6E0 443 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 FSD2A1L4K1 749 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 SEC24BO95487 1268 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 MCMDC2Q4G0Z9 681 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 ATL3Q6DD88 541 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 COPS6Q7L5N1 327 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 ZBTB43O43298 467 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 KIAA0754O94854 1291 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 STX1AQ16623 288 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 WDR78Q5VTH9 848 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 CCDC174Q6PII3 467 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 DZIP3Q86Y13 1208 aaKnown RBP8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 CTAGE1Q96RT6 745 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 DDX21Q9NR30 783 aaKnown RBP eCLIP8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 NIP7Q9Y221 180 aaKnown RBP eCLIP8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 CCDC171Q6TFL3 1326 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 PRPHP41219 470 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 EIF4A2Q14240 407 aaKnown RBP8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 CHRNA2Q15822 529 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 FLAD1Q8NFF5 587 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 ALS2CR12Q96Q35 445 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 TSPY3P0CV98 308 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 TSPY8P0CW00 308 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 CYP7A1P22680 504 aa8.85□□□□□ -0.99
ATP2B4-201ENST00000341360 STK32BQ9NY57 414 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 DENND2AQ9ULE3 1009 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 DYNC1I1O14576 645 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 STX6O43752 255 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 NCBP1Q09161 790 aaKnown RBP8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 HOOK3Q86VS8 718 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 UBXN4Q92575 508 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 RBM17Q96I25 401 aaKnown RBP8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 C6orf50Q9HD87 102 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 GNA11P29992 359 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 USP8P40818 1118 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 PPP2R5BQ15173 497 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 SPINK5Q9NQ38 1064 aaPredicted RBP8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 POLKQ9UBT6 870 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 UQCRHLA0A096LP55 91 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 UQCRHP07919 91 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 RTN1Q16799 776 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 TTC12Q9H892 705 aaPredicted RBP8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 CHPF2Q9P2E5 772 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 ATP7AQ04656 1500 aa8.84□□□□□ -0.99
ATP2B4-201ENST00000341360 DKC1O60832 514 aaKnown RBP eCLIP8.83□□□□□ -12e-47■■■■■ 39.8
ATP2B4-201ENST00000341360 UBE2HP62256 183 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 CCDC40Q4G0X9 1142 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 IFIT1BQ5T764 474 aaKnown RBP8.83□□□□□ -1
ATP2B4-201ENST00000341360 LMBR1LQ6UX01 489 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 FSIP1Q8NA03 581 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 ANTXR1Q9H6X2 564 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 PNMA2Q9UL42 364 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 RTL1A6NKG5 1358 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 SBNO2Q9Y2G9 1366 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 ATP5J2-PTCD1G3V325 749 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 MTIF2P46199 727 aaKnown RBP8.83□□□□□ -1
ATP2B4-201ENST00000341360 TUBB4BP68371 445 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 FILIP1Q7Z7B0 1213 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 KIF18AQ8NI77 898 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 DRC1Q96MC2 740 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 PANK2Q9BZ23 570 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 TSPYL1Q9H0U9 437 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 RBM28Q9NW13 759 aaKnown RBP8.83□□□□□ -1
ATP2B4-201ENST00000341360 MAGI2Q86UL8 1455 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 AOX1Q06278 1338 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 ERBB4Q15303 1308 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 LMOD1P29536 600 aaPredicted RBP8.83□□□□□ -1
ATP2B4-201ENST00000341360 CRACR2AQ9BSW2 395 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 GCOM1H8Y6P7 765 aaPredicted RBP8.83□□□□□ -1
ATP2B4-201ENST00000341360 MYZAPP0CAP1 466 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 SPC24Q8NBT2 197 aa8.83□□□□□ -1
ATP2B4-201ENST00000341360 STX8Q9UNK0 236 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 SH3TC1Q8TE82 1336 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
ATP2B4-201ENST00000341360 PDE1AP54750 535 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 MRPL50Q8N5N7 158 aaKnown RBP8.82□□□□□ -1
ATP2B4-201ENST00000341360 UBA5Q9GZZ9 404 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 EXOC1Q9NV70 894 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 SLC4A4Q9Y6R1 1079 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 MAGEB6P1A0A0J9YX57 407 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 RNMTO43148 476 aaKnown RBP8.82□□□□□ -1
ATP2B4-201ENST00000341360 KRT13P13646 458 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 SSR1P43307 286 aaKnown RBP8.82□□□□□ -1
ATP2B4-201ENST00000341360 TBC1D9Q6ZT07 1266 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 FERMT3Q86UX7 667 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 SYCP3Q8IZU3 236 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 MSANTD4Q8NCY6 345 aa8.82□□□□□ -1
ATP2B4-201ENST00000341360 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.82□□□□□ -1
ATP2B4-201ENST00000341360 SSFA2P28290 1259 aa8.81□□□□□ -1
ATP2B4-201ENST00000341360 ACTN2P35609 894 aa8.81□□□□□ -1
ATP2B4-201ENST00000341360 PTPN14Q15678 1187 aa8.81□□□□□ -1
ATP2B4-201ENST00000341360 ENOX2Q16206 610 aaKnown RBP8.81□□□□□ -1
ATP2B4-201ENST00000341360 MICU3Q86XE3 530 aa8.81□□□□□ -1
ATP2B4-201ENST00000341360 C16orf71Q8IYS4 520 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms