RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 RIOK3O14730 519 aaKnown RBP18.06■□□□□ 0.48
PERM1-201ENST00000341290 HSP90B1P14625 803 aaKnown RBP18.06■□□□□ 0.48
PERM1-201ENST00000341290 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
PERM1-201ENST00000341290 SLFNL1Q499Z3 407 aa18.06■□□□□ 0.48
PERM1-201ENST00000341290 DNAJC2Q99543 621 aaKnown RBP18.06■□□□□ 0.48
PERM1-201ENST00000341290 CBX8Q9HC52 389 aa18.06■□□□□ 0.48
PERM1-201ENST00000341290 HMGN5P82970 282 aaKnown RBP18.05■□□□□ 0.48
PERM1-201ENST00000341290 KCNB2Q92953 911 aa18.05■□□□□ 0.48
PERM1-201ENST00000341290 BCL2L12Q9HB09 334 aa18.05■□□□□ 0.48
PERM1-201ENST00000341290 SPDYE4A6NLX3 237 aa18.05■□□□□ 0.48
PERM1-201ENST00000341290 IGKV5-2P06315 115 aa18.05■□□□□ 0.48
PERM1-201ENST00000341290 TRIM5Q9C035 493 aa18.05■□□□□ 0.48
PERM1-201ENST00000341290 ATRNO75882 1429 aa18.05■□□□□ 0.48
PERM1-201ENST00000341290 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
PERM1-201ENST00000341290 RNF20Q5VTR2 975 aa18.04■□□□□ 0.48
PERM1-201ENST00000341290 LINS1Q8NG48 757 aa18.04■□□□□ 0.48
PERM1-201ENST00000341290 LEO1Q8WVC0 666 aaPredicted RBP18.04■□□□□ 0.48
PERM1-201ENST00000341290 DNAJC25Q9H1X3 360 aa18.04■□□□□ 0.48
PERM1-201ENST00000341290 FBXW7Q969H0 707 aa18.04■□□□□ 0.48
PERM1-201ENST00000341290 C16orf45Q96MC5 204 aaPredicted RBP18.04■□□□□ 0.48
PERM1-201ENST00000341290 MYD88Q99836 296 aa18.04■□□□□ 0.48
PERM1-201ENST00000341290 FTOQ9C0B1 505 aaKnown RBP eCLIP18.04■□□□□ 0.48
PERM1-201ENST00000341290 ANKRD24Q8TF21 1146 aa18.03■□□□□ 0.48
PERM1-201ENST00000341290 GLI3P10071 1580 aa18.03■□□□□ 0.48
PERM1-201ENST00000341290 ZC3H6P61129 1189 aaKnown RBP18.03■□□□□ 0.48
PERM1-201ENST00000341290 PGBD1Q96JS3 809 aa18.03■□□□□ 0.48
PERM1-201ENST00000341290 PRDM11Q9NQV5 511 aa18.03■□□□□ 0.48
PERM1-201ENST00000341290 GOLGA6L6A8MZA4 724 aa18.02■□□□□ 0.48
PERM1-201ENST00000341290 PDCP20941 246 aa18.02■□□□□ 0.48
PERM1-201ENST00000341290 ATP2B3Q16720 1220 aa18.02■□□□□ 0.48
PERM1-201ENST00000341290 BRF1Q92994 677 aa18.02■□□□□ 0.48
PERM1-201ENST00000341290 OVOS2A0A0G2JMS6 1433 aa18.02■□□□□ 0.48
PERM1-201ENST00000341290 PDIA4P13667 645 aaKnown RBP18.02■□□□□ 0.48
PERM1-201ENST00000341290 H3BQV1 296 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 TAF5LO75529 589 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 CHAF1AQ13111 956 aaPredicted RBP18.01■□□□□ 0.47
PERM1-201ENST00000341290 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 Q6ZUG5 572 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 CARD10Q9BWT7 1032 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 HIP1O00291 1037 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 ZBTB22O15209 634 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 DDX46Q7L014 1031 aaKnown RBP18.01■□□□□ 0.47
PERM1-201ENST00000341290 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 ERCC4Q92889 916 aaPredicted RBP18.01■□□□□ 0.47
PERM1-201ENST00000341290 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
PERM1-201ENST00000341290 TFCP2Q12800 502 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
PERM1-201ENST00000341290 SCAND2PQ9GZW5 306 aaPredicted RBP18.01■□□□□ 0.47
PERM1-201ENST00000341290 COL15A1P39059 1388 aa18.01■□□□□ 0.47
PERM1-201ENST00000341290 ATP5J2-PTCD1G3V325 749 aa18■□□□□ 0.47
PERM1-201ENST00000341290 PTCD1O75127 700 aaKnown RBP18■□□□□ 0.47
PERM1-201ENST00000341290 PDIA6Q15084 440 aa18■□□□□ 0.47
PERM1-201ENST00000341290 DBNLQ9UJU6 430 aaKnown RBP18■□□□□ 0.47
PERM1-201ENST00000341290 ZNF165P49910 485 aa18■□□□□ 0.47
PERM1-201ENST00000341290 ANKRD1Q15327 319 aa18■□□□□ 0.47
PERM1-201ENST00000341290 PLCD3Q8N3E9 789 aa18■□□□□ 0.47
PERM1-201ENST00000341290 CHMP4AQ9BY43 222 aa18■□□□□ 0.47
PERM1-201ENST00000341290 DDX21Q9NR30 783 aaKnown RBP eCLIP17.99■□□□□ 0.47
PERM1-201ENST00000341290 GTF2F1P35269 517 aaKnown RBP eCLIP17.98■□□□□ 0.47
PERM1-201ENST00000341290 GUCY1B3Q02153 619 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 NEK1Q96PY6 1258 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.98■□□□□ 0.47
PERM1-201ENST00000341290 TAOK2Q9UL54 1235 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 THRAP3Q9Y2W1 955 aaKnown RBP17.98■□□□□ 0.47
PERM1-201ENST00000341290 MEGF6O75095 1541 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 NEURL1BA8MQ27 555 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 NEXNQ0ZGT2 675 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 NAA30Q147X3 362 aaPredicted RBP17.98■□□□□ 0.47
PERM1-201ENST00000341290 ARID5BQ14865 1188 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 AMOTQ4VCS5 1084 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 CHST3Q7LGC8 479 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 UBE3BQ7Z3V4 1068 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 MRC1P22897 1456 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 A0A0G2JLW4 131 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 CCT2P78371 535 aaKnown RBP17.98■□□□□ 0.47
PERM1-201ENST00000341290 NFATC2IPQ8NCF5 419 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 ZNF592Q92610 1267 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 DBNDD2Q9BQY9 259 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 CLSTN2Q9H4D0 955 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 ELP1O95163 1332 aa17.98■□□□□ 0.47
PERM1-201ENST00000341290 MED23Q9ULK4 1368 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 PAPPAQ13219 1627 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 GCKRQ14397 625 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 GTPBP4Q9BZE4 634 aaKnown RBP17.97■□□□□ 0.47
PERM1-201ENST00000341290 TMEM51Q9NW97 253 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 CYP21A2P08686 494 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 U2AF2P26368 475 aaKnown RBP eCLIP17.97■□□□□ 0.47
PERM1-201ENST00000341290 VPS72Q15906 364 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 CCDC144BQ3MJ40 725 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 CCDC144CPQ8IYA2 1237 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 PDCL2Q8N4E4 241 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
PERM1-201ENST00000341290 ZNF75DP51815 510 aa17.96■□□□□ 0.47
PERM1-201ENST00000341290 CHRNA2Q15822 529 aa17.96■□□□□ 0.47
PERM1-201ENST00000341290 CGNQ9P2M7 1197 aaKnown RBP17.96■□□□□ 0.47
PERM1-201ENST00000341290 CLIP2Q9UDT6 1046 aa17.96■□□□□ 0.47
PERM1-201ENST00000341290 SPATA31A5Q5VU36 1347 aa17.96■□□□□ 0.47
PERM1-201ENST00000341290 SPATA31A7Q8IWB4 1347 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms