RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 STK3Q13188 491 aa17.26■□□□□ 0.35
TDP2-201ENST00000341060 COL5A2P05997 1499 aaPredicted RBP17.26■□□□□ 0.35
TDP2-201ENST00000341060 TTLL7Q6ZT98 887 aa17.26■□□□□ 0.35
TDP2-201ENST00000341060 ZCRB1Q8TBF4 217 aaKnown RBP17.26■□□□□ 0.35
TDP2-201ENST00000341060 CHMP3Q9Y3E7 222 aa17.26■□□□□ 0.35
TDP2-201ENST00000341060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
TDP2-201ENST00000341060 MYH7P12883 1935 aa17.25■□□□□ 0.35
TDP2-201ENST00000341060 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
TDP2-201ENST00000341060 IL15P40933 162 aaPredicted RBP17.25■□□□□ 0.35
TDP2-201ENST00000341060 Q6ZUG5 572 aa17.25■□□□□ 0.35
TDP2-201ENST00000341060 PRDM11Q9NQV5 511 aa17.25■□□□□ 0.35
TDP2-201ENST00000341060 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
TDP2-201ENST00000341060 ADCY5O95622 1261 aa17.24■□□□□ 0.35
TDP2-201ENST00000341060 FAM173BQ6P4H8 233 aa17.24■□□□□ 0.35
TDP2-201ENST00000341060 CCDC191Q8NCU4 936 aa17.24■□□□□ 0.35
TDP2-201ENST00000341060 HELLSQ9NRZ9 838 aa17.24■□□□□ 0.35
TDP2-201ENST00000341060 PAG1Q9NWQ8 432 aa17.24■□□□□ 0.35
TDP2-201ENST00000341060 TNS2Q63HR2 1409 aa17.24■□□□□ 0.35
TDP2-201ENST00000341060 KDM4AO75164 1064 aa17.24■□□□□ 0.35
TDP2-201ENST00000341060 HMGB1P09429 215 aaKnown RBP17.24■□□□□ 0.35
TDP2-201ENST00000341060 NKX1-1Q15270 411 aaPredicted RBP17.24■□□□□ 0.35
TDP2-201ENST00000341060 CCDC192P0DO97 292 aa17.23■□□□□ 0.35
TDP2-201ENST00000341060 TOM1L2Q6ZVM7 507 aa17.23■□□□□ 0.35
TDP2-201ENST00000341060 NEUROD6Q96NK8 337 aa17.23■□□□□ 0.35
TDP2-201ENST00000341060 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
TDP2-201ENST00000341060 ATG3Q9NT62 314 aa17.23■□□□□ 0.35
TDP2-201ENST00000341060 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
TDP2-201ENST00000341060 SPATA32Q96LK8 384 aa17.23■□□□□ 0.35
TDP2-201ENST00000341060 EYA2O00167 538 aa17.22■□□□□ 0.35
TDP2-201ENST00000341060 GOLIM4O00461 696 aa17.22■□□□□ 0.35
TDP2-201ENST00000341060 JAK2O60674 1132 aa17.22■□□□□ 0.35
TDP2-201ENST00000341060 A1BGP04217 495 aa17.22■□□□□ 0.35
TDP2-201ENST00000341060 STOX1Q6ZVD7 989 aa17.22■□□□□ 0.35
TDP2-201ENST00000341060 NUP62CLQ9H1M0 184 aa17.22■□□□□ 0.35
TDP2-201ENST00000341060 R3HCC1Q9Y3T6 440 aaKnown RBP17.22■□□□□ 0.35
TDP2-201ENST00000341060 RRP9O43818 475 aaKnown RBP17.21■□□□□ 0.35
TDP2-201ENST00000341060 CIAO1O76071 339 aa17.21■□□□□ 0.35
TDP2-201ENST00000341060 HSP90B1P14625 803 aaKnown RBP17.21■□□□□ 0.35
TDP2-201ENST00000341060 LIG1P18858 919 aa17.21■□□□□ 0.35
TDP2-201ENST00000341060 TIMM10P62072 90 aa17.21■□□□□ 0.35
TDP2-201ENST00000341060 ZMYM1Q5SVZ6 1142 aa17.21■□□□□ 0.35
TDP2-201ENST00000341060 LEO1Q8WVC0 666 aaPredicted RBP17.21■□□□□ 0.35
TDP2-201ENST00000341060 ZBTB3Q9H5J0 574 aa17.21■□□□□ 0.35
TDP2-201ENST00000341060 NWD2Q9ULI1 1742 aa17.21■□□□□ 0.35
TDP2-201ENST00000341060 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
TDP2-201ENST00000341060 BRF1Q92994 677 aa17.21■□□□□ 0.35
TDP2-201ENST00000341060 LLPHQ9BRT6 129 aaKnown RBP17.21■□□□□ 0.35
TDP2-201ENST00000341060 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
TDP2-201ENST00000341060 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
TDP2-201ENST00000341060 DDX60Q8IY21 1712 aaKnown RBP17.2■□□□□ 0.34
TDP2-201ENST00000341060 SCRN1Q12765 414 aa17.2■□□□□ 0.34
TDP2-201ENST00000341060 LRRC24Q50LG9 513 aa17.2■□□□□ 0.34
TDP2-201ENST00000341060 DHX32Q7L7V1 743 aaKnown RBP17.2■□□□□ 0.34
TDP2-201ENST00000341060 SMARCC2Q8TAQ2 1214 aa17.2■□□□□ 0.34
TDP2-201ENST00000341060 AGXT2Q9BYV1 514 aa17.2■□□□□ 0.34
TDP2-201ENST00000341060 MYH3P11055 1940 aa17.2■□□□□ 0.34
TDP2-201ENST00000341060 GOLGA6L4A6NEF3 574 aa17.2■□□□□ 0.34
TDP2-201ENST00000341060 PFKFB2O60825 505 aa17.2■□□□□ 0.34
TDP2-201ENST00000341060 IL2RBP14784 551 aa17.2■□□□□ 0.34
TDP2-201ENST00000341060 RESTQ13127 1097 aa17.2■□□□□ 0.34
TDP2-201ENST00000341060 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
TDP2-201ENST00000341060 A0A1B0GUL7 405 aa17.19■□□□□ 0.34
TDP2-201ENST00000341060 RBM43Q6ZSC3 357 aaKnown RBP17.19■□□□□ 0.34
TDP2-201ENST00000341060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.19■□□□□ 0.34
TDP2-201ENST00000341060 DDX19AQ9NUU7 478 aaKnown RBP17.19■□□□□ 0.34
TDP2-201ENST00000341060 TFIP11Q9UBB9 837 aaKnown RBP17.19■□□□□ 0.34
TDP2-201ENST00000341060 IFIT1P09914 478 aaKnown RBP17.18■□□□□ 0.34
TDP2-201ENST00000341060 FGD1P98174 961 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 HSP90AA2PQ14568 343 aaPredicted RBP17.18■□□□□ 0.34
TDP2-201ENST00000341060 FAM200AQ8TCP9 573 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 PIBF1Q8WXW3 757 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 ZNF594Q96JF6 807 aaPredicted RBP17.18■□□□□ 0.34
TDP2-201ENST00000341060 LRRC2Q9BYS8 371 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 DACT1Q9NYF0 836 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 MAST3O60307 1309 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 ITGB4P16144 1822 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 H3BQV1 296 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 HSPD1P10809 573 aaKnown RBP17.18■□□□□ 0.34
TDP2-201ENST00000341060 EXOSC10Q01780 885 aaKnown RBP17.18■□□□□ 0.34
TDP2-201ENST00000341060 SLFNL1Q499Z3 407 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 CARD10Q9BWT7 1032 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 TNMDQ9H2S6 317 aa17.18■□□□□ 0.34
TDP2-201ENST00000341060 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
TDP2-201ENST00000341060 AP5Z1O43299 807 aa17.17■□□□□ 0.34
TDP2-201ENST00000341060 TYRO3Q06418 890 aa17.17■□□□□ 0.34
TDP2-201ENST00000341060 CAMK4Q16566 473 aa17.17■□□□□ 0.34
TDP2-201ENST00000341060 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
TDP2-201ENST00000341060 MRVI1Q9Y6F6 885 aa17.17■□□□□ 0.34
TDP2-201ENST00000341060 PHLPP1O60346 1717 aa17.17■□□□□ 0.34
TDP2-201ENST00000341060 RNF113AO15541 343 aaKnown RBP17.17■□□□□ 0.34
TDP2-201ENST00000341060 NSUN7Q8NE18 718 aaKnown RBP17.17■□□□□ 0.34
TDP2-201ENST00000341060 DDX11Q96FC9 970 aa17.17■□□□□ 0.34
TDP2-201ENST00000341060 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
TDP2-201ENST00000341060 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.16■□□□□ 0.34
TDP2-201ENST00000341060 E7EWF7 191 aa17.16■□□□□ 0.34
TDP2-201ENST00000341060 HMGN5P82970 282 aaKnown RBP17.16■□□□□ 0.34
TDP2-201ENST00000341060 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
TDP2-201ENST00000341060 PGBD1Q96JS3 809 aa17.16■□□□□ 0.34
TDP2-201ENST00000341060 PUS3Q9BZE2 481 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms