RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 NBPF6Q5VWK0 638 aa11□□□□□ -0.65
TRERF1-201ENST00000340840 NBPF4Q96M43 638 aa11□□□□□ -0.65
TRERF1-201ENST00000340840 TRIM29Q14134 588 aa11□□□□□ -0.65
TRERF1-201ENST00000340840 TEX35Q5T0J7 233 aa11□□□□□ -0.65
TRERF1-201ENST00000340840 DDX46Q7L014 1031 aaKnown RBP11□□□□□ -0.65
TRERF1-201ENST00000340840 KRT222Q8N1A0 295 aa11□□□□□ -0.65
TRERF1-201ENST00000340840 JMYQ8N9B5 988 aa11□□□□□ -0.65
TRERF1-201ENST00000340840 MRPS27Q92552 414 aaKnown RBP11□□□□□ -0.65
TRERF1-201ENST00000340840 ORAI2Q96SN7 254 aa11□□□□□ -0.65
TRERF1-201ENST00000340840 FUCA2Q9BTY2 467 aa11□□□□□ -0.65
TRERF1-201ENST00000340840 OLFM4Q6UX06 510 aa11□□□□□ -0.65
TRERF1-201ENST00000340840 DHX32Q7L7V1 743 aaKnown RBP11□□□□□ -0.65
TRERF1-201ENST00000340840 TATP17735 454 aaPredicted RBP10.99□□□□□ -0.65
TRERF1-201ENST00000340840 SNW1Q13573 536 aaKnown RBP10.99□□□□□ -0.65
TRERF1-201ENST00000340840 AOPEPQ8N6M6 819 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 CCDC150Q8NCX0 1101 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 ZNF397Q8NF99 534 aaPredicted RBP10.99□□□□□ -0.65
TRERF1-201ENST00000340840 JARID2Q92833 1246 aaPredicted RBP10.99□□□□□ -0.65
TRERF1-201ENST00000340840 HOOK1Q9UJC3 728 aaKnown RBP10.99□□□□□ -0.65
TRERF1-201ENST00000340840 PTPDC1A2A3K4 754 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 GIGYF1O75420 1035 aaPredicted RBP10.99□□□□□ -0.65
TRERF1-201ENST00000340840 FAM160A1Q05DH4 1040 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 NAA16Q6N069 864 aaPredicted RBP10.99□□□□□ -0.65
TRERF1-201ENST00000340840 UBE3BQ7Z3V4 1068 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 XAGE3Q8WTP9 111 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 C8orf76Q96K31 380 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 KCNF1Q9H3M0 494 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 AGLP35573 1532 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 NRKQ7Z2Y5 1582 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 CHRNA2Q15822 529 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 PPP1R1BQ9UD71 204 aaPredicted RBP10.99□□□□□ -0.65
TRERF1-201ENST00000340840 NRBP1Q9UHY1 535 aa10.99□□□□□ -0.65
TRERF1-201ENST00000340840 A0A087WZG4 1122 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 CBFA2T2O43439 604 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 SLU7O95391 586 aaKnown RBP10.98□□□□□ -0.65
TRERF1-201ENST00000340840 SYCP1Q15431 976 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 COPS6Q7L5N1 327 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 FBXO41Q8TF61 875 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 MRFAP1L1Q96HT8 127 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 SERPINC1P01008 464 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 SLC3A2P08195 630 aaKnown RBP10.98□□□□□ -0.65
TRERF1-201ENST00000340840 ILDR1Q86SU0 546 aaPredicted RBP10.98□□□□□ -0.65
TRERF1-201ENST00000340840 PTPRUQ92729 1446 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 SPATA31D1Q6ZQQ2 1576 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 GOLIM4O00461 696 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 TAF5LO75529 589 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 ATP5JP18859 108 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 CDC25BP30305 580 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 TMC6Q7Z403 805 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 KLHDC4Q8TBB5 520 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 ANKRD24Q8TF21 1146 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 CACTINQ8WUQ7 758 aaKnown RBP10.98□□□□□ -0.65
TRERF1-201ENST00000340840 UBXN4Q92575 508 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 ERO1AQ96HE7 468 aa10.98□□□□□ -0.65
TRERF1-201ENST00000340840 HSPA1LP34931 641 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 KCNG4Q8TDN1 519 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 USP16Q9Y5T5 823 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 SASH1O94885 1247 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 IFIT1P09914 478 aaKnown RBP10.97□□□□□ -0.65
TRERF1-201ENST00000340840 GABPB1Q06547 395 aaPredicted RBP10.97□□□□□ -0.65
TRERF1-201ENST00000340840 APOBRQ0VD83 1088 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 IMMTQ16891 758 aaKnown RBP10.97□□□□□ -0.65
TRERF1-201ENST00000340840 TNNI3KQ59H18 835 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 CCDC158Q5M9N0 1113 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 FPGT-TNNI3KV9GXZ4 949 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 TFCP2Q12800 502 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 KCNB2Q92953 911 aa10.97□□□□□ -0.65
TRERF1-201ENST00000340840 EDC3Q96F86 508 aaKnown RBP10.97□□□□□ -0.65
TRERF1-201ENST00000340840 TUBB4AP04350 444 aa10.96□□□□□ -0.65
TRERF1-201ENST00000340840 PROSER3Q2NL68 480 aa10.96□□□□□ -0.65
TRERF1-201ENST00000340840 CCDC129Q6ZRS4 1044 aa10.96□□□□□ -0.65
TRERF1-201ENST00000340840 LRRC8AQ8IWT6 810 aa10.96□□□□□ -0.65
TRERF1-201ENST00000340840 TLR7Q9NYK1 1049 aaKnown RBP10.96□□□□□ -0.65
TRERF1-201ENST00000340840 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
TRERF1-201ENST00000340840 APPP05067 770 aa10.96□□□□□ -0.65
TRERF1-201ENST00000340840 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRERF1-201ENST00000340840 V9GYY5 206 aaPredicted RBP10.96□□□□□ -0.65
TRERF1-201ENST00000340840 RICTORQ6R327 1708 aa10.96□□□□□ -0.66
TRERF1-201ENST00000340840 IGSF3O75054 1194 aa10.96□□□□□ -0.66
TRERF1-201ENST00000340840 PPFIA3O75145 1194 aa10.96□□□□□ -0.66
TRERF1-201ENST00000340840 FKBP4Q02790 459 aaKnown RBP eCLIP10.96□□□□□ -0.66
TRERF1-201ENST00000340840 RESTQ13127 1097 aa10.96□□□□□ -0.66
TRERF1-201ENST00000340840 GPS2Q13227 327 aa10.96□□□□□ -0.66
TRERF1-201ENST00000340840 ZNF589Q86UQ0 364 aaPredicted RBP10.96□□□□□ -0.66
TRERF1-201ENST00000340840 ALDH8A1Q9H2A2 487 aaPredicted RBP10.96□□□□□ -0.66
TRERF1-201ENST00000340840 BIN1O00499 593 aa10.95□□□□□ -0.66
TRERF1-201ENST00000340840 TOB2Q14106 344 aaPredicted RBP10.95□□□□□ -0.66
TRERF1-201ENST00000340840 GCKRQ14397 625 aa10.95□□□□□ -0.66
TRERF1-201ENST00000340840 BMS1Q14692 1282 aaKnown RBP10.95□□□□□ -0.66
TRERF1-201ENST00000340840 ATP2B3Q16720 1220 aa10.95□□□□□ -0.66
TRERF1-201ENST00000340840 CFAP100Q494V2 611 aa10.95□□□□□ -0.66
TRERF1-201ENST00000340840 PLA2G4DQ86XP0 818 aa10.95□□□□□ -0.66
TRERF1-201ENST00000340840 ORC3Q9UBD5 711 aaPredicted RBP10.95□□□□□ -0.66
TRERF1-201ENST00000340840 ADCY9O60503 1353 aa10.95□□□□□ -0.66
TRERF1-201ENST00000340840 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
TRERF1-201ENST00000340840 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
TRERF1-201ENST00000340840 TTC39AQ5SRH9 613 aa10.95□□□□□ -0.66
TRERF1-201ENST00000340840 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms