RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 NBPF6Q5VWK0 638 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 CCDC186Q7Z3E2 898 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 ANKRD20A12PQ8NF67 263 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 BORCS6Q96GS4 357 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 NBPF4Q96M43 638 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 PDRG1Q9NUG6 133 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.71□□□□□ -0.05
DFFB-202ENST00000339350 ARHGAP23Q9P227 1491 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 KDRP35968 1356 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 CLCN6P51797 869 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 ERO1AQ96HE7 468 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 HYPKQ9NX55 129 aa14.71□□□□□ -0.05
DFFB-202ENST00000339350 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.71□□□□□ -0.05
DFFB-202ENST00000339350 FMN2Q9NZ56 1722 aa14.71□□□□□ -0.06
DFFB-202ENST00000339350 TTC21AQ8NDW8 1320 aa14.71□□□□□ -0.06
DFFB-202ENST00000339350 HTATSF1O43719 755 aaKnown RBP14.71□□□□□ -0.06
DFFB-202ENST00000339350 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.06
DFFB-202ENST00000339350 MAP3K5Q99683 1374 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 STK3Q13188 491 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 MCTP2Q6DN12 878 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 RPAINQ86UA6 219 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 SLIT1O75093 1534 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 ST3GAL1Q11201 340 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 POLA2Q14181 598 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 ME3Q16798 604 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 CWF19L2Q2TBE0 894 aaKnown RBP14.7□□□□□ -0.06
DFFB-202ENST00000339350 GOLGA5Q8TBA6 731 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 FAM227BQ96M60 508 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 RBM28Q9NW13 759 aaKnown RBP14.7□□□□□ -0.06
DFFB-202ENST00000339350 MTMR6Q9Y217 621 aa14.7□□□□□ -0.06
DFFB-202ENST00000339350 PRAMEF22A3QJZ6 481 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 ANKRD65E5RJM6 399 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 ERCC6LQ2NKX8 1250 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 CKAP2LQ8IYA6 745 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 DNAAF4Q8WXU2 420 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 SIL1Q9H173 461 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 NRBP1Q9UHY1 535 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 RAB11FIP3O75154 756 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 ZC3H6P61129 1189 aaKnown RBP14.69□□□□□ -0.06
DFFB-202ENST00000339350 MPRIPQ6WCQ1 1025 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 OTUD6BQ8N6M0 293 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 CCDC8Q9H0W5 538 aaPredicted RBP14.69□□□□□ -0.06
DFFB-202ENST00000339350 TFIP11Q9UBB9 837 aaKnown RBP14.69□□□□□ -0.06
DFFB-202ENST00000339350 TAF6LQ9Y6J9 622 aa14.69□□□□□ -0.06
DFFB-202ENST00000339350 H2AFXP16104 143 aaPredicted RBP14.68□□□□□ -0.06
DFFB-202ENST00000339350 LMAN1P49257 510 aa14.68□□□□□ -0.06
DFFB-202ENST00000339350 BEND3Q5T5X7 828 aa14.68□□□□□ -0.06
DFFB-202ENST00000339350 NALCNQ8IZF0 1738 aa14.68□□□□□ -0.06
DFFB-202ENST00000339350 PROSER3Q2NL68 480 aa14.68□□□□□ -0.06
DFFB-202ENST00000339350 SWT1Q5T5J6 900 aaKnown RBP14.68□□□□□ -0.06
DFFB-202ENST00000339350 CDC37L1Q7L3B6 337 aa14.68□□□□□ -0.06
DFFB-202ENST00000339350 DRC7Q8IY82 874 aa14.68□□□□□ -0.06
DFFB-202ENST00000339350 C9orf78Q9NZ63 289 aaPredicted RBP14.68□□□□□ -0.06
DFFB-202ENST00000339350 MRVI1Q9Y6F6 885 aa14.68□□□□□ -0.06
DFFB-202ENST00000339350 PPP1R12AO14974 1030 aaPredicted RBP14.67□□□□□ -0.06
DFFB-202ENST00000339350 AIMP1Q12904 312 aaKnown RBP14.67□□□□□ -0.06
DFFB-202ENST00000339350 TTLL5Q6EMB2 1281 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 AACSQ86V21 672 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 TMEM87AQ8NBN3 555 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 KLHDC4Q8TBB5 520 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 PIK3R5Q8WYR1 880 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 TPCN1Q9ULQ1 816 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 AOX1Q06278 1338 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 EIF3CLB5ME19 914 aaKnown RBP14.67□□□□□ -0.06
DFFB-202ENST00000339350 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
DFFB-202ENST00000339350 LIG1P18858 919 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 LARP1BQ659C4 914 aaKnown RBP14.67□□□□□ -0.06
DFFB-202ENST00000339350 LUZP1Q86V48 1076 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 CLASRPQ8N2M8 674 aaKnown RBP14.67□□□□□ -0.06
DFFB-202ENST00000339350 EIF3CQ99613 913 aaKnown RBP14.67□□□□□ -0.06
DFFB-202ENST00000339350 CYP46A1Q9Y6A2 500 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 PIK3C2AO00443 1686 aa14.67□□□□□ -0.06
DFFB-202ENST00000339350 SLU7O95391 586 aaKnown RBP14.66□□□□□ -0.06
DFFB-202ENST00000339350 OAS2P29728 719 aaKnown RBP14.66□□□□□ -0.06
DFFB-202ENST00000339350 TTC6Q86TZ1 520 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 SUGP1Q8IWZ8 645 aaKnown RBP14.66□□□□□ -0.06
DFFB-202ENST00000339350 CABLES1Q8TDN4 633 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 TLR7Q9NYK1 1049 aaKnown RBP14.66□□□□□ -0.06
DFFB-202ENST00000339350 NDUFB9Q9Y6M9 179 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 USP27XA6NNY8 438 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 FOSBP53539 338 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 EIF4A1P60842 406 aaKnown RBP14.66□□□□□ -0.06
DFFB-202ENST00000339350 EDC3Q96F86 508 aaKnown RBP14.66□□□□□ -0.06
DFFB-202ENST00000339350 RBM8AQ9Y5S9 174 aaKnown RBP14.66□□□□□ -0.06
DFFB-202ENST00000339350 TOPAZ1Q8N9V7 1692 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 PPFIA3O75145 1194 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 GLRX3O76003 335 aaKnown RBP14.66□□□□□ -0.06
DFFB-202ENST00000339350 FUCA2Q9BTY2 467 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 BOLA2Q9H3K6 86 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 MAP3K2Q9Y2U5 619 aa14.66□□□□□ -0.06
DFFB-202ENST00000339350 REXO1L1PQ8IX06 675 aa14.65□□□□□ -0.06
DFFB-202ENST00000339350 CHGBP05060 677 aa14.65□□□□□ -0.06
DFFB-202ENST00000339350 SCP2P22307 547 aa14.65□□□□□ -0.06
DFFB-202ENST00000339350 KCNA4P22459 653 aa14.65□□□□□ -0.06
DFFB-202ENST00000339350 NMIQ13287 307 aaPredicted RBP14.65□□□□□ -0.06
DFFB-202ENST00000339350 ZSCAN25Q6NSZ9 544 aa14.65□□□□□ -0.06
DFFB-202ENST00000339350 PROSER2Q86WR7 435 aaPredicted RBP14.65□□□□□ -0.06
DFFB-202ENST00000339350 LRRN4CLQ8ND94 238 aa14.65□□□□□ -0.06
DFFB-202ENST00000339350 ATP6V1DQ9Y5K8 247 aa14.65□□□□□ -0.06
DFFB-202ENST00000339350 HSPA2P54652 639 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms