RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TMC4Q7Z404 712 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 ZNF609O15014 1411 aa17.86■□□□□ 0.45
NIPAL3-202ENST00000339255 IFIT2P09913 472 aaKnown RBP17.86■□□□□ 0.45
NIPAL3-202ENST00000339255 SRGNP10124 158 aa17.86■□□□□ 0.45
NIPAL3-202ENST00000339255 AOX1Q06278 1338 aa17.86■□□□□ 0.45
NIPAL3-202ENST00000339255 GPATCH3Q96I76 525 aa17.86■□□□□ 0.45
NIPAL3-202ENST00000339255 CACNA1SQ13698 1873 aa17.85■□□□□ 0.45
NIPAL3-202ENST00000339255 PSDA5PKW4 1024 aaPredicted RBP17.85■□□□□ 0.45
NIPAL3-202ENST00000339255 MX1P20591 662 aa17.85■□□□□ 0.45
NIPAL3-202ENST00000339255 TNNI3KQ59H18 835 aa17.85■□□□□ 0.45
NIPAL3-202ENST00000339255 AACSQ86V21 672 aa17.85■□□□□ 0.45
NIPAL3-202ENST00000339255 CELF1Q92879 486 aaKnown RBP17.85■□□□□ 0.45
NIPAL3-202ENST00000339255 FPGT-TNNI3KV9GXZ4 949 aa17.85■□□□□ 0.45
NIPAL3-202ENST00000339255 SALL3Q9BXA9 1300 aa17.84■□□□□ 0.45
NIPAL3-202ENST00000339255 H0YIN7 160 aa17.84■□□□□ 0.45
NIPAL3-202ENST00000339255 BBOX1O75936 387 aa17.84■□□□□ 0.45
NIPAL3-202ENST00000339255 PLEKHM2Q8IWE5 1019 aa17.84■□□□□ 0.45
NIPAL3-202ENST00000339255 VGLL2Q8N8G2 317 aa17.84■□□□□ 0.45
NIPAL3-202ENST00000339255 MASTLQ96GX5 879 aa17.84■□□□□ 0.45
NIPAL3-202ENST00000339255 OSBPL3Q9H4L5 887 aa17.84■□□□□ 0.45
NIPAL3-202ENST00000339255 TTC41PQ6P2S7 1318 aa17.84■□□□□ 0.45
NIPAL3-202ENST00000339255 PDE8BO95263 885 aa17.83■□□□□ 0.45
NIPAL3-202ENST00000339255 ALDH1B1P30837 517 aa17.83■□□□□ 0.45
NIPAL3-202ENST00000339255 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.45
NIPAL3-202ENST00000339255 STYK1Q6J9G0 422 aa17.83■□□□□ 0.45
NIPAL3-202ENST00000339255 SKAP1Q86WV1 359 aa17.83■□□□□ 0.45
NIPAL3-202ENST00000339255 EAF2Q96CJ1 260 aaPredicted RBP17.83■□□□□ 0.45
NIPAL3-202ENST00000339255 STAP2Q9UGK3 403 aa17.83■□□□□ 0.45
NIPAL3-202ENST00000339255 PDE1AP54750 535 aa17.83■□□□□ 0.44
NIPAL3-202ENST00000339255 ANKRD2Q9GZV1 360 aa17.83■□□□□ 0.44
NIPAL3-202ENST00000339255 BCL11AQ9H165 835 aa17.83■□□□□ 0.44
NIPAL3-202ENST00000339255 ATF5Q9Y2D1 282 aaPredicted RBP17.83■□□□□ 0.44
NIPAL3-202ENST00000339255 AK9Q5TCS8 1911 aa17.82■□□□□ 0.44
NIPAL3-202ENST00000339255 CHRNDQ07001 517 aa17.82■□□□□ 0.44
NIPAL3-202ENST00000339255 C2CD5Q86YS7 1000 aa17.82■□□□□ 0.44
NIPAL3-202ENST00000339255 C16orf71Q8IYS4 520 aaPredicted RBP17.82■□□□□ 0.44
NIPAL3-202ENST00000339255 SGIP1Q9BQI5 828 aa17.82■□□□□ 0.44
NIPAL3-202ENST00000339255 A0A1B0GUL7 405 aa17.81■□□□□ 0.44
NIPAL3-202ENST00000339255 ATP2B3Q16720 1220 aa17.81■□□□□ 0.44
NIPAL3-202ENST00000339255 OTUD7AQ8TE49 926 aaPredicted RBP17.81■□□□□ 0.44
NIPAL3-202ENST00000339255 MINPP1Q9UNW1 487 aa17.81■□□□□ 0.44
NIPAL3-202ENST00000339255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.81■□□□□ 0.44
NIPAL3-202ENST00000339255 ERC2O15083 957 aa17.8■□□□□ 0.44
NIPAL3-202ENST00000339255 LPIN2Q92539 896 aa17.8■□□□□ 0.44
NIPAL3-202ENST00000339255 ECHDC1Q9NTX5 307 aa17.8■□□□□ 0.44
NIPAL3-202ENST00000339255 KIAA1551Q9HCM1 1747 aa17.8■□□□□ 0.44
NIPAL3-202ENST00000339255 BMP2KLQ5H9B9 411 aa17.8■□□□□ 0.44
NIPAL3-202ENST00000339255 CNKSR1Q969H4 720 aa17.8■□□□□ 0.44
NIPAL3-202ENST00000339255 SPON1Q9HCB6 807 aa17.8■□□□□ 0.44
NIPAL3-202ENST00000339255 DBNLQ9UJU6 430 aaKnown RBP17.8■□□□□ 0.44
NIPAL3-202ENST00000339255 BRCA1P38398 1863 aaKnown RBP17.79■□□□□ 0.44
NIPAL3-202ENST00000339255 LTBP1Q14766 1721 aa17.79■□□□□ 0.44
NIPAL3-202ENST00000339255 PPEF1O14829 653 aaPredicted RBP17.79■□□□□ 0.44
NIPAL3-202ENST00000339255 GLRX3O76003 335 aaKnown RBP17.79■□□□□ 0.44
NIPAL3-202ENST00000339255 SLC5A1P13866 664 aa17.79■□□□□ 0.44
NIPAL3-202ENST00000339255 XDHP47989 1333 aa17.78■□□□□ 0.44
NIPAL3-202ENST00000339255 SLX4Q8IY92 1834 aa17.78■□□□□ 0.44
NIPAL3-202ENST00000339255 FGFR2P21802 821 aa17.78■□□□□ 0.44
NIPAL3-202ENST00000339255 PTGER2P43116 358 aa17.78■□□□□ 0.44
NIPAL3-202ENST00000339255 TGFB2P61812 414 aa17.78■□□□□ 0.44
NIPAL3-202ENST00000339255 UBE4AQ14139 1066 aa17.78■□□□□ 0.44
NIPAL3-202ENST00000339255 TTC22Q5TAA0 569 aa17.78■□□□□ 0.44
NIPAL3-202ENST00000339255 NEUROD6Q96NK8 337 aa17.78■□□□□ 0.44
NIPAL3-202ENST00000339255 TMX4Q9H1E5 349 aaPredicted RBP17.78■□□□□ 0.44
NIPAL3-202ENST00000339255 IFIT1P09914 478 aaKnown RBP17.77■□□□□ 0.44
NIPAL3-202ENST00000339255 CCDC8Q9H0W5 538 aaPredicted RBP17.77■□□□□ 0.44
NIPAL3-202ENST00000339255 ATP6V0A2Q9Y487 856 aa17.77■□□□□ 0.44
NIPAL3-202ENST00000339255 CD2APQ9Y5K6 639 aa17.77■□□□□ 0.44
NIPAL3-202ENST00000339255 TIMM10P62072 90 aa17.77■□□□□ 0.43
NIPAL3-202ENST00000339255 GORABQ5T7V8 394 aa17.77■□□□□ 0.43
NIPAL3-202ENST00000339255 SP8Q8IXZ3 490 aa17.77■□□□□ 0.43
NIPAL3-202ENST00000339255 HELBQ8NG08 1087 aaPredicted RBP17.77■□□□□ 0.43
NIPAL3-202ENST00000339255 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.43
NIPAL3-202ENST00000339255 DBNDD2Q9BQY9 259 aa17.77■□□□□ 0.43
NIPAL3-202ENST00000339255 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.43
NIPAL3-202ENST00000339255 TAF5LO75529 589 aa17.76■□□□□ 0.43
NIPAL3-202ENST00000339255 KCNJ4P48050 445 aa17.76■□□□□ 0.43
NIPAL3-202ENST00000339255 PI4K2BQ8TCG2 481 aa17.76■□□□□ 0.43
NIPAL3-202ENST00000339255 XAGE2Q96GT9 111 aa17.76■□□□□ 0.43
NIPAL3-202ENST00000339255 ANKIB1Q9P2G1 1089 aa17.76■□□□□ 0.43
NIPAL3-202ENST00000339255 MYH13Q9UKX3 1938 aa17.76■□□□□ 0.43
NIPAL3-202ENST00000339255 ATP5JP18859 108 aa17.75■□□□□ 0.43
NIPAL3-202ENST00000339255 CHRNA5P30532 468 aa17.75■□□□□ 0.43
NIPAL3-202ENST00000339255 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
NIPAL3-202ENST00000339255 PRPF40BQ6NWY9 871 aaKnown RBP17.75■□□□□ 0.43
NIPAL3-202ENST00000339255 PODXL2Q9NZ53 605 aa17.75■□□□□ 0.43
NIPAL3-202ENST00000339255 LEMD3Q9Y2U8 911 aa17.75■□□□□ 0.43
NIPAL3-202ENST00000339255 AKAP11Q9UKA4 1901 aa17.74■□□□□ 0.43
NIPAL3-202ENST00000339255 GRIPAP1Q4V328 841 aa17.74■□□□□ 0.43
NIPAL3-202ENST00000339255 TSHZ3Q63HK5 1081 aa17.74■□□□□ 0.43
NIPAL3-202ENST00000339255 CC2D2BQ6DHV5 1058 aa17.74■□□□□ 0.43
NIPAL3-202ENST00000339255 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.74■□□□□ 0.43
NIPAL3-202ENST00000339255 ZNF512BQ96KM6 892 aaPredicted RBP17.74■□□□□ 0.43
NIPAL3-202ENST00000339255 ZNF804BA4D1E1 1349 aa17.73■□□□□ 0.43
NIPAL3-202ENST00000339255 ATP2B4P23634 1241 aa17.73■□□□□ 0.43
NIPAL3-202ENST00000339255 TTLL6Q8N841 843 aa17.73■□□□□ 0.43
NIPAL3-202ENST00000339255 GSPT1P15170 499 aaKnown RBP17.72■□□□□ 0.43
NIPAL3-202ENST00000339255 DPEP1P16444 411 aa17.72■□□□□ 0.43
NIPAL3-202ENST00000339255 ADORA1P30542 326 aa17.72■□□□□ 0.43
NIPAL3-202ENST00000339255 CAVIN4Q5BKX8 364 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms