RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 STK32BQ9NY57 414 aa17.93■□□□□ 0.46
CBX3-201ENST00000337620 CNTROBQ8N137 903 aa17.93■□□□□ 0.46
CBX3-201ENST00000337620 RIC1Q4ADV7 1423 aa17.93■□□□□ 0.46
CBX3-201ENST00000337620 DDR1Q08345 913 aa17.92■□□□□ 0.46
CBX3-201ENST00000337620 ANKRD18AQ8IVF6 992 aa17.92■□□□□ 0.46
CBX3-201ENST00000337620 HELBQ8NG08 1087 aaPredicted RBP17.92■□□□□ 0.46
CBX3-201ENST00000337620 MROH5Q6ZUA9 1318 aa17.92■□□□□ 0.46
CBX3-201ENST00000337620 ZNF609O15014 1411 aa17.92■□□□□ 0.46
CBX3-201ENST00000337620 POLRMTO00411 1230 aaKnown RBP17.92■□□□□ 0.46
CBX3-201ENST00000337620 ST5P78524 1137 aa17.92■□□□□ 0.46
CBX3-201ENST00000337620 PDE8BO95263 885 aa17.91■□□□□ 0.46
CBX3-201ENST00000337620 ATP2B3Q16720 1220 aa17.91■□□□□ 0.46
CBX3-201ENST00000337620 ATP5JP18859 108 aa17.9■□□□□ 0.46
CBX3-201ENST00000337620 GORABQ5T7V8 394 aa17.9■□□□□ 0.46
CBX3-201ENST00000337620 VGLL2Q8N8G2 317 aa17.9■□□□□ 0.46
CBX3-201ENST00000337620 CASZ1Q86V15 1759 aa17.9■□□□□ 0.46
CBX3-201ENST00000337620 DDX46Q7L014 1031 aaKnown RBP17.9■□□□□ 0.46
CBX3-201ENST00000337620 CELF1Q92879 486 aaKnown RBP17.9■□□□□ 0.46
CBX3-201ENST00000337620 XAGE2Q96GT9 111 aa17.9■□□□□ 0.46
CBX3-201ENST00000337620 TAF5LO75529 589 aa17.89■□□□□ 0.45
CBX3-201ENST00000337620 ADORA1P30542 326 aa17.89■□□□□ 0.45
CBX3-201ENST00000337620 ANP32AP39687 249 aaKnown RBP17.89■□□□□ 0.45
CBX3-201ENST00000337620 MSL1Q68DK7 614 aa17.89■□□□□ 0.45
CBX3-201ENST00000337620 SPEF2Q9C093 1822 aa17.89■□□□□ 0.45
CBX3-201ENST00000337620 LRP5O75197 1615 aa17.89■□□□□ 0.45
CBX3-201ENST00000337620 TAF1P21675 1872 aa17.89■□□□□ 0.45
CBX3-201ENST00000337620 CHMLP26374 656 aa17.88■□□□□ 0.45
CBX3-201ENST00000337620 RPS8P62241 208 aaKnown RBP17.88■□□□□ 0.45
CBX3-201ENST00000337620 CCDC158Q5M9N0 1113 aa17.88■□□□□ 0.45
CBX3-201ENST00000337620 EVI5LQ96CN4 794 aa17.88■□□□□ 0.45
CBX3-201ENST00000337620 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
CBX3-201ENST00000337620 COL4A1P02462 1669 aa17.88■□□□□ 0.45
CBX3-201ENST00000337620 MMP10P09238 476 aa17.87■□□□□ 0.45
CBX3-201ENST00000337620 CHRNDQ07001 517 aa17.87■□□□□ 0.45
CBX3-201ENST00000337620 PUM3Q15397 648 aaKnown RBP17.87■□□□□ 0.45
CBX3-201ENST00000337620 DNAJC2Q99543 621 aaKnown RBP17.87■□□□□ 0.45
CBX3-201ENST00000337620 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
CBX3-201ENST00000337620 PARP3Q9Y6F1 533 aa17.87■□□□□ 0.45
CBX3-201ENST00000337620 NDUFB9Q9Y6M9 179 aa17.87■□□□□ 0.45
CBX3-201ENST00000337620 AK9Q5TCS8 1911 aa17.87■□□□□ 0.45
CBX3-201ENST00000337620 SNAP23O00161 211 aa17.86■□□□□ 0.45
CBX3-201ENST00000337620 EIF5BO60841 1220 aaKnown RBP17.86■□□□□ 0.45
CBX3-201ENST00000337620 TTC39AQ5SRH9 613 aa17.86■□□□□ 0.45
CBX3-201ENST00000337620 CCDC125Q86Z20 511 aa17.86■□□□□ 0.45
CBX3-201ENST00000337620 LPIN2Q92539 896 aa17.86■□□□□ 0.45
CBX3-201ENST00000337620 RPGRQ92834 1020 aaKnown RBP17.86■□□□□ 0.45
CBX3-201ENST00000337620 C22orf23Q9BZE7 217 aa17.86■□□□□ 0.45
CBX3-201ENST00000337620 EDC3Q96F86 508 aaKnown RBP17.86■□□□□ 0.45
CBX3-201ENST00000337620 TBC1D32Q96NH3 1257 aa17.86■□□□□ 0.45
CBX3-201ENST00000337620 HAUS7Q99871 368 aa17.86■□□□□ 0.45
CBX3-201ENST00000337620 IFIT1P09914 478 aaKnown RBP17.85■□□□□ 0.45
CBX3-201ENST00000337620 MINPP1Q9UNW1 487 aa17.85■□□□□ 0.45
CBX3-201ENST00000337620 SLC5A1P13866 664 aa17.84■□□□□ 0.45
CBX3-201ENST00000337620 FGFR2P21802 821 aa17.84■□□□□ 0.45
CBX3-201ENST00000337620 ESYT1Q9BSJ8 1104 aa17.84■□□□□ 0.45
CBX3-201ENST00000337620 FSD1Q9BTV5 496 aa17.84■□□□□ 0.45
CBX3-201ENST00000337620 DIAPH3Q9NSV4 1193 aa17.84■□□□□ 0.45
CBX3-201ENST00000337620 GRAPQ13588 217 aa17.83■□□□□ 0.44
CBX3-201ENST00000337620 CRY2Q49AN0 593 aa17.83■□□□□ 0.44
CBX3-201ENST00000337620 CWC27Q6UX04 472 aaKnown RBP17.83■□□□□ 0.44
CBX3-201ENST00000337620 GRAPLQ8TC17 118 aaPredicted RBP17.83■□□□□ 0.44
CBX3-201ENST00000337620 GOLIM4O00461 696 aa17.82■□□□□ 0.44
CBX3-201ENST00000337620 REC8O95072 547 aa17.82■□□□□ 0.44
CBX3-201ENST00000337620 RBM17Q96I25 401 aaKnown RBP17.82■□□□□ 0.44
CBX3-201ENST00000337620 PAG1Q9NWQ8 432 aa17.82■□□□□ 0.44
CBX3-201ENST00000337620 FKBP4Q02790 459 aaKnown RBP eCLIP17.81■□□□□ 0.44
CBX3-201ENST00000337620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.81■□□□□ 0.44
CBX3-201ENST00000337620 BRIP1Q9BX63 1249 aa17.81■□□□□ 0.44
CBX3-201ENST00000337620 PDGFDQ9GZP0 370 aaPredicted RBP17.81■□□□□ 0.44
CBX3-201ENST00000337620 SNRKQ9NRH2 765 aa17.81■□□□□ 0.44
CBX3-201ENST00000337620 CCDC102BQ68D86 513 aa17.81■□□□□ 0.44
CBX3-201ENST00000337620 HIP1O00291 1037 aa17.8■□□□□ 0.44
CBX3-201ENST00000337620 PHKA1P46020 1223 aa17.8■□□□□ 0.44
CBX3-201ENST00000337620 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
CBX3-201ENST00000337620 SCARF1Q14162 830 aa17.8■□□□□ 0.44
CBX3-201ENST00000337620 USP26Q9BXU7 913 aa17.8■□□□□ 0.44
CBX3-201ENST00000337620 ANKRD2Q9GZV1 360 aa17.8■□□□□ 0.44
CBX3-201ENST00000337620 WTIPA6NIX2 430 aaPredicted RBP17.79■□□□□ 0.44
CBX3-201ENST00000337620 KCNJ4P48050 445 aa17.79■□□□□ 0.44
CBX3-201ENST00000337620 UBE4AQ14139 1066 aa17.79■□□□□ 0.44
CBX3-201ENST00000337620 RUFY2Q8WXA3 655 aa17.79■□□□□ 0.44
CBX3-201ENST00000337620 IL25Q9H293 177 aa17.79■□□□□ 0.44
CBX3-201ENST00000337620 ANO2Q9NQ90 1003 aa17.79■□□□□ 0.44
CBX3-201ENST00000337620 QSER1Q2KHR3 1735 aa17.79■□□□□ 0.44
CBX3-201ENST00000337620 MCAMP43121 646 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 RBM25P49756 843 aaKnown RBP17.78■□□□□ 0.44
CBX3-201ENST00000337620 PI16Q6UXB8 463 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 KBTBD3Q8NAB2 608 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 ANTXR1Q9H6X2 564 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 NRXN2Q9P2S2 1712 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 SGSM2O43147 1006 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 UQCRFS1P1P0C7P4 283 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 HOXA10P31260 410 aaPredicted RBP17.78■□□□□ 0.44
CBX3-201ENST00000337620 PDE6BP35913 854 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 ZAP70P43403 619 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 BCAMP50895 628 aa17.78■□□□□ 0.44
CBX3-201ENST00000337620 NMIQ13287 307 aaPredicted RBP17.78■□□□□ 0.44
CBX3-201ENST00000337620 ZNF512BQ96KM6 892 aaPredicted RBP17.78■□□□□ 0.44
CBX3-201ENST00000337620 FAM227BQ96M60 508 aa17.77■□□□□ 0.44
CBX3-201ENST00000337620 ANKIB1Q9P2G1 1089 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms