RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 ARHGEF25Q86VW2 580 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 HACE1Q8IYU2 909 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 CAGE1Q8TC20 777 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 RNF216Q9NWF9 866 aaPredicted RBP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 NOD1Q9Y239 953 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 CA8P35219 290 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 JARID2Q92833 1246 aaPredicted RBP8.5□□□□□ -1.05
EPHA3-201ENST00000336596 LGR6Q9HBX8 967 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 KCNG1Q9UIX4 513 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 GIGYF2Q6Y7W6 1299 aaKnown RBP8.5□□□□□ -1.05
EPHA3-201ENST00000336596 USP48Q86UV5 1035 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 TSPYL6Q8N831 410 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 SLC52A2Q9HAB3 445 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 RIMS1Q86UR5 1692 aaKnown RBP8.5□□□□□ -1.05
EPHA3-201ENST00000336596 MFSD6Q6ZSS7 791 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 HOOK3Q86VS8 718 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 PPFIBP1Q86W92 1011 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 MRPL50Q8N5N7 158 aaKnown RBP8.5□□□□□ -1.05
EPHA3-201ENST00000336596 DCPSQ96C86 337 aaKnown RBP8.5□□□□□ -1.05
EPHA3-201ENST00000336596 DEF6Q9H4E7 631 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 SH2B1Q9NRF2 756 aaPredicted RBP8.5□□□□□ -1.05
EPHA3-201ENST00000336596 SMTNL1A8MU46 457 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 HOMER1Q86YM7 354 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 FAM114A1Q8IWE2 563 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 CSADQ9Y600 493 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 ZMYM4Q5VZL5 1548 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 AATKQ6ZMQ8 1374 aa8.5□□□□□ -1.05
EPHA3-201ENST00000336596 VAMP4O75379 141 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 NAA16Q6N069 864 aaPredicted RBP8.49□□□□□ -1.05
EPHA3-201ENST00000336596 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 M0QZ92 97 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 SMARCA5O60264 1052 aaPredicted RBP8.49□□□□□ -1.05
EPHA3-201ENST00000336596 EZRP15311 586 aaKnown RBP8.49□□□□□ -1.05
EPHA3-201ENST00000336596 CHMP4BP1P59074 171 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 FKBP15Q5T1M5 1219 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 MSANTD4Q8NCY6 345 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
EPHA3-201ENST00000336596 DPP8Q6V1X1 898 aaPredicted RBP8.49□□□□□ -1.05
EPHA3-201ENST00000336596 PRKAG2Q9UGJ0 569 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 TRPM1Q7Z4N2 1603 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 HOXB7P09629 217 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 MX1P20591 662 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 KRT85P78386 507 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 ESR2Q92731 530 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 HAUS2Q9NVX0 235 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 ZEB2O60315 1214 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 GBP2P32456 591 aaPredicted RBP8.49□□□□□ -1.05
EPHA3-201ENST00000336596 NLRP5P59047 1200 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 TAF12Q16514 161 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 RBM26Q5T8P6 1007 aaKnown RBP8.49□□□□□ -1.05
EPHA3-201ENST00000336596 FMNL3Q8IVF7 1028 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 DDX12PQ92771 950 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 TCP11L1Q9NUJ3 509 aa8.49□□□□□ -1.05
EPHA3-201ENST00000336596 RTL1A6NKG5 1358 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 GRM8O00222 908 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 MCTP2Q6DN12 878 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 DDX21Q9NR30 783 aaKnown RBP eCLIP8.48□□□□□ -1.05
EPHA3-201ENST00000336596 SMARCC2Q8TAQ2 1214 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 WDR66Q8TBY9 1149 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 SSX2IPQ9Y2D8 614 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 GOLGA8AA7E2F4 631 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 GOLGA8BA8MQT2 603 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 ATP2B3Q16720 1220 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 LINS1Q8NG48 757 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
EPHA3-201ENST00000336596 TBCAO75347 108 aaKnown RBP8.48□□□□□ -1.05
EPHA3-201ENST00000336596 ATP2B1P20020 1258 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 FOSBP53539 338 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 MEIS3Q99687 375 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 CARD10Q9BWT7 1032 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 GOPCQ9HD26 462 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 PIK3C2BO00750 1634 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 SPATA31A3Q5VYP0 1347 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 ZBED4O75132 1171 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 CCDC174Q6PII3 467 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 KRT27Q7Z3Y8 459 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 CCDC112Q8NEF3 446 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 BOLA2Q9H3K6 86 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 TTC12Q9H892 705 aaPredicted RBP8.48□□□□□ -1.05
EPHA3-201ENST00000336596 C6orf50Q9HD87 102 aa8.48□□□□□ -1.05
EPHA3-201ENST00000336596 IFIT3O14879 490 aaKnown RBP8.47□□□□□ -1.05
EPHA3-201ENST00000336596 NBPF7P0C2Y1 421 aaPredicted RBP8.47□□□□□ -1.05
EPHA3-201ENST00000336596 FOXD4L6Q3SYB3 417 aaPredicted RBP8.47□□□□□ -1.05
EPHA3-201ENST00000336596 KANK3Q6NY19 840 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 FOXD4L3Q6VB84 417 aaPredicted RBP8.47□□□□□ -1.05
EPHA3-201ENST00000336596 CCDC97Q96F63 343 aaPredicted RBP8.47□□□□□ -1.05
EPHA3-201ENST00000336596 MADDQ8WXG6 1647 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 SEPT7Q16181 437 aaKnown RBP8.47□□□□□ -1.05
EPHA3-201ENST00000336596 CWC27Q6UX04 472 aaKnown RBP8.47□□□□□ -1.05
EPHA3-201ENST00000336596 CCAR2Q8N163 923 aaKnown RBP8.47□□□□□ -1.05
EPHA3-201ENST00000336596 NCOA7Q8NI08 942 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 TRIM35Q9UPQ4 493 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 MAGEB6P1A0A0J9YX57 407 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 PHKG2P15735 406 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 SPATA32Q96LK8 384 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 CHL1O00533 1208 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 ANAPC15P60006 121 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 CKAP2LQ8IYA6 745 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 LAMC1P11047 1609 aa8.47□□□□□ -1.05
EPHA3-201ENST00000336596 WDR17Q8IZU2 1322 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms