RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 KBTBD3Q8NAB2 608 aa17.61■□□□□ 0.41
UBA1-201ENST00000335972 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
UBA1-201ENST00000335972 GOLGA6L4A6NEF3 574 aa17.6■□□□□ 0.41
UBA1-201ENST00000335972 GORABQ5T7V8 394 aa17.6■□□□□ 0.41
UBA1-201ENST00000335972 OFD1O75665 1012 aa17.6■□□□□ 0.41
UBA1-201ENST00000335972 SPATA32Q96LK8 384 aa17.6■□□□□ 0.41
UBA1-201ENST00000335972 H3BQV1 296 aa17.6■□□□□ 0.41
UBA1-201ENST00000335972 SCRN1Q12765 414 aa17.6■□□□□ 0.41
UBA1-201ENST00000335972 IFFO2Q5TF58 517 aa17.6■□□□□ 0.41
UBA1-201ENST00000335972 DNAJC10Q8IXB1 793 aa17.6■□□□□ 0.41
UBA1-201ENST00000335972 DACT1Q9NYF0 836 aa17.6■□□□□ 0.41
UBA1-201ENST00000335972 STRCP1A6NGW2 1772 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 KDM4AO75164 1064 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 ARID3AQ99856 593 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 WDR17Q8IZU2 1322 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 A0A087WWV3 80 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 ANKRD1Q15327 319 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 PCDH11XQ9BZA7 1347 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 PCDH11YQ9BZA8 1340 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 WASHC4Q2M389 1173 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 UBE2Q2Q8WVN8 375 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 GTF3C6Q969F1 213 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
UBA1-201ENST00000335972 HMG20BQ9P0W2 317 aa17.59■□□□□ 0.41
UBA1-201ENST00000335972 M0R2C6 588 aa17.58■□□□□ 0.41
UBA1-201ENST00000335972 EYA2O00167 538 aa17.58■□□□□ 0.41
UBA1-201ENST00000335972 IL2RBP14784 551 aa17.58■□□□□ 0.41
UBA1-201ENST00000335972 SCARF1Q14162 830 aa17.58■□□□□ 0.41
UBA1-201ENST00000335972 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.41
UBA1-201ENST00000335972 KIF1AQ12756 1690 aa17.58■□□□□ 0.4
UBA1-201ENST00000335972 COL18A1P39060 1754 aa17.58■□□□□ 0.4
UBA1-201ENST00000335972 FAM184AQ8NB25 1140 aa17.58■□□□□ 0.4
UBA1-201ENST00000335972 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.4
UBA1-201ENST00000335972 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.4
UBA1-201ENST00000335972 BICD2Q8TD16 824 aa17.58■□□□□ 0.4
UBA1-201ENST00000335972 ADAMTS7Q9UKP4 1686 aa17.57■□□□□ 0.4
UBA1-201ENST00000335972 FBXW7Q969H0 707 aa17.57■□□□□ 0.4
UBA1-201ENST00000335972 FAM177BA6PVY3 158 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 CCDC57Q2TAC2 916 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 OTUD7BQ6GQQ9 843 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 LUZP1Q86V48 1076 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 LEO1Q8WVC0 666 aaPredicted RBP17.56■□□□□ 0.4
UBA1-201ENST00000335972 HSPD1P10809 573 aaKnown RBP17.56■□□□□ 0.4
UBA1-201ENST00000335972 PDCP20941 246 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 DNTTIP2Q5QJE6 756 aaKnown RBP17.56■□□□□ 0.4
UBA1-201ENST00000335972 OSBP2Q969R2 916 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 CEP126Q9P2H0 1117 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 MAST3O60307 1309 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 IL15P40933 162 aaPredicted RBP17.56■□□□□ 0.4
UBA1-201ENST00000335972 NUP62CLQ9H1M0 184 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 TMOD3Q9NYL9 352 aa17.56■□□□□ 0.4
UBA1-201ENST00000335972 NR1I2O75469 434 aa17.55■□□□□ 0.4
UBA1-201ENST00000335972 CSPP1Q1MSJ5 1256 aa17.55■□□□□ 0.4
UBA1-201ENST00000335972 HS1BP3Q53T59 392 aa17.55■□□□□ 0.4
UBA1-201ENST00000335972 PGBD1Q96JS3 809 aa17.55■□□□□ 0.4
UBA1-201ENST00000335972 FUCA2Q9BTY2 467 aa17.55■□□□□ 0.4
UBA1-201ENST00000335972 ARFGEF2Q9Y6D5 1785 aa17.55■□□□□ 0.4
UBA1-201ENST00000335972 ZNF335Q9H4Z2 1342 aaPredicted RBP17.55■□□□□ 0.4
UBA1-201ENST00000335972 KRT32Q14532 448 aa17.55■□□□□ 0.4
UBA1-201ENST00000335972 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.55■□□□□ 0.4
UBA1-201ENST00000335972 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
UBA1-201ENST00000335972 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
UBA1-201ENST00000335972 HLFQ16534 295 aa17.55■□□□□ 0.4
UBA1-201ENST00000335972 TTC39AQ5SRH9 613 aa17.54■□□□□ 0.4
UBA1-201ENST00000335972 E7EWF7 191 aa17.54■□□□□ 0.4
UBA1-201ENST00000335972 XAGE2Q96GT9 111 aa17.54■□□□□ 0.4
UBA1-201ENST00000335972 TNMDQ9H2S6 317 aa17.54■□□□□ 0.4
UBA1-201ENST00000335972 ZNF500O60304 480 aaPredicted RBP17.54■□□□□ 0.4
UBA1-201ENST00000335972 CCDC191Q8NCU4 936 aa17.54■□□□□ 0.4
UBA1-201ENST00000335972 GJB4Q9NTQ9 266 aa17.54■□□□□ 0.4
UBA1-201ENST00000335972 CTDNEP1O95476 244 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 TSGA10IPQ3SY00 556 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 PIGBQ92521 554 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 DENND2AQ9ULE3 1009 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 PTPDC1A2A3K4 754 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 ERVV-2B6SEH9 535 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 ZAP70P43403 619 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 MAP3K11Q16584 847 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 DHX32Q7L7V1 743 aaKnown RBP17.53■□□□□ 0.4
UBA1-201ENST00000335972 RNF113AO15541 343 aaKnown RBP17.53■□□□□ 0.4
UBA1-201ENST00000335972 TYRO3Q06418 890 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 ZMYM1Q5SVZ6 1142 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 TSC1Q92574 1164 aa17.53■□□□□ 0.4
UBA1-201ENST00000335972 MRC1P22897 1456 aa17.52■□□□□ 0.4
UBA1-201ENST00000335972 SNAP23O00161 211 aa17.52■□□□□ 0.4
UBA1-201ENST00000335972 HELBQ8NG08 1087 aaPredicted RBP17.52■□□□□ 0.4
UBA1-201ENST00000335972 LETM1O95202 739 aaPredicted RBP17.52■□□□□ 0.39
UBA1-201ENST00000335972 CCDC192P0DO97 292 aa17.52■□□□□ 0.39
UBA1-201ENST00000335972 RESTQ13127 1097 aa17.52■□□□□ 0.39
UBA1-201ENST00000335972 ANO6Q4KMQ2 910 aa17.52■□□□□ 0.39
UBA1-201ENST00000335972 JCADQ9P266 1359 aa17.52■□□□□ 0.39
UBA1-201ENST00000335972 TCIRG1Q13488 830 aa17.51■□□□□ 0.39
UBA1-201ENST00000335972 HSP90AA2PQ14568 343 aaPredicted RBP17.51■□□□□ 0.39
UBA1-201ENST00000335972 NSUN7Q8NE18 718 aaKnown RBP17.51■□□□□ 0.39
UBA1-201ENST00000335972 FAM13BQ9NYF5 915 aa17.51■□□□□ 0.39
UBA1-201ENST00000335972 MRVI1Q9Y6F6 885 aa17.51■□□□□ 0.39
UBA1-201ENST00000335972 PUS7LQ9H0K6 701 aaKnown RBP17.51■□□□□ 0.39
UBA1-201ENST00000335972 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
UBA1-201ENST00000335972 CPDO75976 1380 aa17.5■□□□□ 0.39
UBA1-201ENST00000335972 UQCRHLA0A096LP55 91 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms