RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SMC5Q8IY18 1101 aa17.39■□□□□ 0.37
C9orf47-201ENST00000334490 ZNF335Q9H4Z2 1342 aaPredicted RBP17.39■□□□□ 0.37
C9orf47-201ENST00000334490 ZNF594Q96JF6 807 aaPredicted RBP17.39■□□□□ 0.37
C9orf47-201ENST00000334490 INSRP06213 1382 aa17.39■□□□□ 0.37
C9orf47-201ENST00000334490 SYCE3A1L190 88 aa17.39■□□□□ 0.37
C9orf47-201ENST00000334490 PPP4R3AQ6IN85 833 aa17.39■□□□□ 0.37
C9orf47-201ENST00000334490 FILIP1Q7Z7B0 1213 aa17.39■□□□□ 0.37
C9orf47-201ENST00000334490 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
C9orf47-201ENST00000334490 ERVK-7P63135 1459 aa17.38■□□□□ 0.37
C9orf47-201ENST00000334490 TCP11L1Q9NUJ3 509 aa17.38■□□□□ 0.37
C9orf47-201ENST00000334490 PPP4R3BQ5MIZ7 849 aa17.38■□□□□ 0.37
C9orf47-201ENST00000334490 KCNQ3O43525 872 aa17.38■□□□□ 0.37
C9orf47-201ENST00000334490 PPP1R12BO60237 982 aaPredicted RBP17.38■□□□□ 0.37
C9orf47-201ENST00000334490 GCKRQ14397 625 aa17.38■□□□□ 0.37
C9orf47-201ENST00000334490 RTN1Q16799 776 aa17.38■□□□□ 0.37
C9orf47-201ENST00000334490 ARHGEF25Q86VW2 580 aa17.38■□□□□ 0.37
C9orf47-201ENST00000334490 GDPD2Q9HCC8 539 aa17.38■□□□□ 0.37
C9orf47-201ENST00000334490 DENND2AQ9ULE3 1009 aa17.38■□□□□ 0.37
C9orf47-201ENST00000334490 CCP110O43303 1012 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 NBPF7P0C2Y1 421 aaPredicted RBP17.37■□□□□ 0.37
C9orf47-201ENST00000334490 HIBADHP31937 336 aaKnown RBP17.37■□□□□ 0.37
C9orf47-201ENST00000334490 GRM1Q13255 1194 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 PLXNC1O60486 1568 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 HECW2Q9P2P5 1572 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 TMX3Q96JJ7 454 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 GNAQP50148 359 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 CFAP100Q494V2 611 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 PANK2Q9BZ23 570 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 QTRT2Q9H974 415 aaKnown RBP17.37■□□□□ 0.37
C9orf47-201ENST00000334490 SEPT11Q9NVA2 429 aaKnown RBP17.37■□□□□ 0.37
C9orf47-201ENST00000334490 NF2P35240 595 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 UBA7P41226 1012 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 PUM3Q15397 648 aaKnown RBP17.37■□□□□ 0.37
C9orf47-201ENST00000334490 FSIP1Q8NA03 581 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 CNNM3Q8NE01 707 aa17.37■□□□□ 0.37
C9orf47-201ENST00000334490 GIGYF1O75420 1035 aaPredicted RBP17.36■□□□□ 0.37
C9orf47-201ENST00000334490 DBNDD2Q9BQY9 259 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 SPATA31E1Q6ZUB1 1445 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 H0YIN7 160 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 PRC1O43663 620 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 ANAPC15P60006 121 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 Q6ZUG5 572 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 SUCLG2Q96I99 432 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 GGA1Q9UJY5 639 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 RUFY1Q96T51 708 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
C9orf47-201ENST00000334490 GCC2Q8IWJ2 1684 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 GRPEL1Q9HAV7 217 aa17.36■□□□□ 0.37
C9orf47-201ENST00000334490 IDEP14735 1019 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 SAMM50Q9Y512 469 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 RDXP35241 583 aaKnown RBP17.35■□□□□ 0.37
C9orf47-201ENST00000334490 ARGLU1Q9NWB6 273 aaPredicted RBP17.35■□□□□ 0.37
C9orf47-201ENST00000334490 TAF5LO75529 589 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 TRAF1Q13077 416 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 TNNI3KQ59H18 835 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 ANO10Q9NW15 660 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 GJA3Q9Y6H8 435 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 FPGT-TNNI3KV9GXZ4 949 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 TNPO1Q92973 898 aaKnown RBP17.35■□□□□ 0.37
C9orf47-201ENST00000334490 CALML4Q96GE6 196 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 ALG1Q9BT22 464 aa17.35■□□□□ 0.37
C9orf47-201ENST00000334490 CARD10Q9BWT7 1032 aa17.34■□□□□ 0.37
C9orf47-201ENST00000334490 MBD4O95243 580 aa17.34■□□□□ 0.37
C9orf47-201ENST00000334490 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
C9orf47-201ENST00000334490 CHST3Q7LGC8 479 aa17.34■□□□□ 0.37
C9orf47-201ENST00000334490 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
C9orf47-201ENST00000334490 PREX2Q70Z35 1606 aa17.34■□□□□ 0.37
C9orf47-201ENST00000334490 TCIRG1Q13488 830 aa17.34■□□□□ 0.37
C9orf47-201ENST00000334490 DPP8Q6V1X1 898 aaPredicted RBP17.33■□□□□ 0.37
C9orf47-201ENST00000334490 XAGE2Q96GT9 111 aa17.33■□□□□ 0.37
C9orf47-201ENST00000334490 HEATR3Q7Z4Q2 680 aa17.33■□□□□ 0.37
C9orf47-201ENST00000334490 CKAP2LQ8IYA6 745 aa17.33■□□□□ 0.36
C9orf47-201ENST00000334490 DNAJC5Q9H3Z4 198 aa17.33■□□□□ 0.36
C9orf47-201ENST00000334490 PRR36Q9H6K5 1346 aa17.33■□□□□ 0.36
C9orf47-201ENST00000334490 LMOD1P29536 600 aaPredicted RBP17.33■□□□□ 0.36
C9orf47-201ENST00000334490 CCDC183Q5T5S1 534 aa17.33■□□□□ 0.36
C9orf47-201ENST00000334490 TTC6Q86TZ1 520 aa17.33■□□□□ 0.36
C9orf47-201ENST00000334490 TEX11Q8IYF3 940 aa17.33■□□□□ 0.36
C9orf47-201ENST00000334490 TSG101Q99816 390 aa17.33■□□□□ 0.36
C9orf47-201ENST00000334490 CCDC171Q6TFL3 1326 aa17.32■□□□□ 0.36
C9orf47-201ENST00000334490 CHMLP26374 656 aa17.32■□□□□ 0.36
C9orf47-201ENST00000334490 CCDC148Q8NFR7 591 aa17.32■□□□□ 0.36
C9orf47-201ENST00000334490 IL27Q8NEV9 243 aa17.32■□□□□ 0.36
C9orf47-201ENST00000334490 FAM135BQ49AJ0 1406 aa17.32■□□□□ 0.36
C9orf47-201ENST00000334490 LARGE2Q8N3Y3 721 aa17.32■□□□□ 0.36
C9orf47-201ENST00000334490 LIG1P18858 919 aa17.31■□□□□ 0.36
C9orf47-201ENST00000334490 FAM177A1Q8N128 213 aaPredicted RBP17.31■□□□□ 0.36
C9orf47-201ENST00000334490 KIF20AO95235 890 aa17.31■□□□□ 0.36
C9orf47-201ENST00000334490 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
C9orf47-201ENST00000334490 TXLNBQ8N3L3 684 aa17.31■□□□□ 0.36
C9orf47-201ENST00000334490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.36
C9orf47-201ENST00000334490 PNMA6EA0A0J9YXQ4 647 aa17.31■□□□□ 0.36
C9orf47-201ENST00000334490 ZSCAN16Q9H4T2 348 aaPredicted RBP17.31■□□□□ 0.36
C9orf47-201ENST00000334490 PRDM15P57071 1507 aaPredicted RBP17.31■□□□□ 0.36
C9orf47-201ENST00000334490 LOC102724428A0A0B4J2F2 783 aa17.3■□□□□ 0.36
C9orf47-201ENST00000334490 CTAGE5O15320 804 aa17.3■□□□□ 0.36
C9orf47-201ENST00000334490 SIK1P57059 783 aa17.3■□□□□ 0.36
C9orf47-201ENST00000334490 TTLL7Q6ZT98 887 aa17.3■□□□□ 0.36
C9orf47-201ENST00000334490 TNNI2P48788 182 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms