RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PDLIM2Q96JY6 352 aa22.5■■□□□ 1.19
RFTN1-201ENST00000334133 ANKRD1Q15327 319 aa22.49■■□□□ 1.19
RFTN1-201ENST00000334133 GORABQ5T7V8 394 aa22.49■■□□□ 1.19
RFTN1-201ENST00000334133 PI16Q6UXB8 463 aa22.49■■□□□ 1.19
RFTN1-201ENST00000334133 TTLL5Q6EMB2 1281 aa22.49■■□□□ 1.19
RFTN1-201ENST00000334133 TTC6Q86TZ1 520 aa22.49■■□□□ 1.19
RFTN1-201ENST00000334133 U3KPZ7 1027 aaPredicted RBP22.49■■□□□ 1.19
RFTN1-201ENST00000334133 LAMB4A4D0S4 1761 aa22.49■■□□□ 1.19
RFTN1-201ENST00000334133 ABCC6O95255 1503 aa22.48■■□□□ 1.19
RFTN1-201ENST00000334133 TCIRG1Q13488 830 aa22.48■■□□□ 1.19
RFTN1-201ENST00000334133 HLFQ16534 295 aa22.48■■□□□ 1.19
RFTN1-201ENST00000334133 PLCB2Q00722 1185 aa22.48■■□□□ 1.19
RFTN1-201ENST00000334133 TAF7LQ5H9L4 462 aa22.48■■□□□ 1.19
RFTN1-201ENST00000334133 CEP126Q9P2H0 1117 aa22.48■■□□□ 1.19
RFTN1-201ENST00000334133 PHF14O94880 888 aa22.47■■□□□ 1.19
RFTN1-201ENST00000334133 JCADQ9P266 1359 aa22.47■■□□□ 1.19
RFTN1-201ENST00000334133 PARP4Q9UKK3 1724 aaKnown RBP22.47■■□□□ 1.19
RFTN1-201ENST00000334133 SCARF1Q14162 830 aa22.47■■□□□ 1.19
RFTN1-201ENST00000334133 CAMK4Q16566 473 aa22.47■■□□□ 1.19
RFTN1-201ENST00000334133 USP25Q9UHP3 1055 aa22.47■■□□□ 1.19
RFTN1-201ENST00000334133 CCT2P78371 535 aaKnown RBP22.46■■□□□ 1.19
RFTN1-201ENST00000334133 ISCA1Q9BUE6 129 aa22.46■■□□□ 1.19
RFTN1-201ENST00000334133 ATG3Q9NT62 314 aa22.46■■□□□ 1.19
RFTN1-201ENST00000334133 APOBRQ0VD83 1088 aa22.46■■□□□ 1.19
RFTN1-201ENST00000334133 KRT32Q14532 448 aa22.46■■□□□ 1.19
RFTN1-201ENST00000334133 TSGA10IPQ3SY00 556 aa22.46■■□□□ 1.19
RFTN1-201ENST00000334133 HAND2P61296 217 aa22.45■■□□□ 1.18
RFTN1-201ENST00000334133 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.45■■□□□ 1.18
RFTN1-201ENST00000334133 M0R2C6 588 aa22.45■■□□□ 1.18
RFTN1-201ENST00000334133 KIF6Q6ZMV9 814 aa22.45■■□□□ 1.18
RFTN1-201ENST00000334133 MAST3O60307 1309 aa22.45■■□□□ 1.18
RFTN1-201ENST00000334133 HSPD1P10809 573 aaKnown RBP22.44■■□□□ 1.18
RFTN1-201ENST00000334133 CEBPZQ03701 1054 aaKnown RBP22.44■■□□□ 1.18
RFTN1-201ENST00000334133 WASHC4Q2M389 1173 aa22.44■■□□□ 1.18
RFTN1-201ENST00000334133 XAGE2Q96GT9 111 aa22.44■■□□□ 1.18
RFTN1-201ENST00000334133 NCOA5Q9HCD5 579 aaKnown RBP22.44■■□□□ 1.18
RFTN1-201ENST00000334133 PTMAP06454 111 aaKnown RBP22.44■■□□□ 1.18
RFTN1-201ENST00000334133 TJP1Q07157 1748 aa22.44■■□□□ 1.18
RFTN1-201ENST00000334133 SCRN1Q12765 414 aa22.44■■□□□ 1.18
RFTN1-201ENST00000334133 GTF3C6Q969F1 213 aa22.44■■□□□ 1.18
RFTN1-201ENST00000334133 LIG1P18858 919 aa22.44■■□□□ 1.18
RFTN1-201ENST00000334133 KRT85P78386 507 aa22.44■■□□□ 1.18
RFTN1-201ENST00000334133 TTC39AQ5SRH9 613 aa22.44■■□□□ 1.18
RFTN1-201ENST00000334133 OSBP2Q969R2 916 aa22.44■■□□□ 1.18
RFTN1-201ENST00000334133 GPHNQ9NQX3 736 aaPredicted RBP22.43■■□□□ 1.18
RFTN1-201ENST00000334133 ZMYM1Q5SVZ6 1142 aa22.43■■□□□ 1.18
RFTN1-201ENST00000334133 SH3TC1Q8TE82 1336 aa22.43■■□□□ 1.18
RFTN1-201ENST00000334133 NUP188Q5SRE5 1749 aa22.42■■□□□ 1.18
RFTN1-201ENST00000334133 FAM177BA6PVY3 158 aa22.42■■□□□ 1.18
RFTN1-201ENST00000334133 PDCP20941 246 aa22.42■■□□□ 1.18
RFTN1-201ENST00000334133 SLC4A9Q96Q91 983 aa22.42■■□□□ 1.18
RFTN1-201ENST00000334133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.42■■□□□ 1.18
RFTN1-201ENST00000334133 RNF113AO15541 343 aaKnown RBP22.42■■□□□ 1.18
RFTN1-201ENST00000334133 TBC1D2BQ9UPU7 963 aa22.42■■□□□ 1.18
RFTN1-201ENST00000334133 UBR2Q8IWV8 1755 aa22.42■■□□□ 1.18
RFTN1-201ENST00000334133 ZNF830Q96NB3 372 aaPredicted RBP22.41■■□□□ 1.18
RFTN1-201ENST00000334133 ZAP70P43403 619 aa22.41■■□□□ 1.18
RFTN1-201ENST00000334133 IFIT5Q13325 482 aaKnown RBP22.41■■□□□ 1.18
RFTN1-201ENST00000334133 RAB11FIP4Q86YS3 637 aa22.41■■□□□ 1.18
RFTN1-201ENST00000334133 TAOK2Q9UL54 1235 aa22.41■■□□□ 1.18
RFTN1-201ENST00000334133 H3BQV1 296 aa22.41■■□□□ 1.18
RFTN1-201ENST00000334133 IFFO2Q5TF58 517 aa22.41■■□□□ 1.18
RFTN1-201ENST00000334133 GREM2Q9H772 168 aa22.41■■□□□ 1.18
RFTN1-201ENST00000334133 TNS2Q63HR2 1409 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 E7EWF7 191 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 STARD3NLO95772 234 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 GUCY1B3Q02153 619 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 CCDC158Q5M9N0 1113 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 SPATA32Q96LK8 384 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 GPR108Q9NPR9 543 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 HELLSQ9NRZ9 838 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 ZBTB1Q9Y2K1 713 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 SHANK3Q9BYB0 1731 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 PALLDQ8WX93 1383 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 PLEKHG2Q9H7P9 1386 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 CKAP2LQ8IYA6 745 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 FAM184AQ8NB25 1140 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 NOL7Q9UMY1 257 aaKnown RBP22.4■■□□□ 1.18
RFTN1-201ENST00000334133 TOGARAM1Q9Y4F4 1720 aa22.4■■□□□ 1.18
RFTN1-201ENST00000334133 CSPP1Q1MSJ5 1256 aa22.39■■□□□ 1.18
RFTN1-201ENST00000334133 DHX32Q7L7V1 743 aaKnown RBP22.39■■□□□ 1.18
RFTN1-201ENST00000334133 ALDH8A1Q9H2A2 487 aaPredicted RBP22.39■■□□□ 1.18
RFTN1-201ENST00000334133 CIAO1O76071 339 aa22.39■■□□□ 1.17
RFTN1-201ENST00000334133 FTOQ9C0B1 505 aaKnown RBP eCLIP22.39■■□□□ 1.17
RFTN1-201ENST00000334133 GOLGA6L4A6NEF3 574 aa22.38■■□□□ 1.17
RFTN1-201ENST00000334133 METTL24Q5JXM2 366 aa22.38■■□□□ 1.17
RFTN1-201ENST00000334133 LDHAL6AQ6ZMR3 332 aa22.38■■□□□ 1.17
RFTN1-201ENST00000334133 KDM4FA0A1W2PPD8 638 aa22.38■■□□□ 1.17
RFTN1-201ENST00000334133 PCCAP05165 728 aaPredicted RBP22.38■■□□□ 1.17
RFTN1-201ENST00000334133 ITGA6P23229 1130 aa22.38■■□□□ 1.17
RFTN1-201ENST00000334133 ZBTB38Q8NAP3 1195 aaPredicted RBP22.38■■□□□ 1.17
RFTN1-201ENST00000334133 DNAJC5Q9H3Z4 198 aa22.38■■□□□ 1.17
RFTN1-201ENST00000334133 HELBQ8NG08 1087 aaPredicted RBP22.37■■□□□ 1.17
RFTN1-201ENST00000334133 DACT1Q9NYF0 836 aa22.37■■□□□ 1.17
RFTN1-201ENST00000334133 STRCQ7RTU9 1775 aa22.37■■□□□ 1.17
RFTN1-201ENST00000334133 LEO1Q8WVC0 666 aaPredicted RBP22.37■■□□□ 1.17
RFTN1-201ENST00000334133 DSCC1Q9BVC3 393 aa22.37■■□□□ 1.17
RFTN1-201ENST00000334133 PUS7LQ9H0K6 701 aaKnown RBP22.37■■□□□ 1.17
RFTN1-201ENST00000334133 RFX7Q2KHR2 1363 aa22.37■■□□□ 1.17
RFTN1-201ENST00000334133 MAP3K15Q6ZN16 1313 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms