RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 DDX17Q92841 729 aaKnown RBP13□□□□□ -0.33
CCDC87-201ENST00000333861 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
CCDC87-201ENST00000333861 LGR6Q9HBX8 967 aa13□□□□□ -0.33
CCDC87-201ENST00000333861 DNAI1Q9UI46 699 aa13□□□□□ -0.33
CCDC87-201ENST00000333861 RGPD8O14715 1765 aaPredicted RBP13□□□□□ -0.33
CCDC87-201ENST00000333861 SLC27A2O14975 620 aa13□□□□□ -0.33
CCDC87-201ENST00000333861 ZSCAN26Q16670 478 aa13□□□□□ -0.33
CCDC87-201ENST00000333861 E4F1Q66K89 784 aaPredicted RBP13□□□□□ -0.33
CCDC87-201ENST00000333861 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
CCDC87-201ENST00000333861 ADGRL3Q9HAR2 1447 aa13□□□□□ -0.33
CCDC87-201ENST00000333861 CCDC171Q6TFL3 1326 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 LMAN1P49257 510 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 NLRP6P59044 892 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 TOB2Q14106 344 aaPredicted RBP12.99□□□□□ -0.33
CCDC87-201ENST00000333861 PROSER3Q2NL68 480 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 FSD1Q9BTV5 496 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 CLSTN2Q9H4D0 955 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 DHX16O60231 1041 aaKnown RBP12.99□□□□□ -0.33
CCDC87-201ENST00000333861 TFRCP02786 760 aaKnown RBP12.99□□□□□ -0.33
CCDC87-201ENST00000333861 GNL2Q13823 731 aaKnown RBP12.99□□□□□ -0.33
CCDC87-201ENST00000333861 TMCO3Q6UWJ1 677 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 ABTB2Q8N961 1025 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 USP6P35125 1406 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 URI1O94763 535 aaPredicted RBP12.99□□□□□ -0.33
CCDC87-201ENST00000333861 SART3Q15020 963 aaKnown RBP12.99□□□□□ -0.33
CCDC87-201ENST00000333861 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 FOXR1Q6PIV2 292 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 GPATCH11Q8N954 259 aa12.99□□□□□ -0.33
CCDC87-201ENST00000333861 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
CCDC87-201ENST00000333861 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 IQCB1Q15051 598 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 UBXN4Q92575 508 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 CARD6Q9BX69 1037 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 CRB1P82279 1406 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 HTATSF1O43719 755 aaKnown RBP12.98□□□□□ -0.33
CCDC87-201ENST00000333861 ZKSCAN1P17029 563 aaPredicted RBP12.98□□□□□ -0.33
CCDC87-201ENST00000333861 LMOD1P29536 600 aaPredicted RBP12.98□□□□□ -0.33
CCDC87-201ENST00000333861 EP400NLQ6ZTU2 488 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 PPP1R13BQ96KQ4 1090 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 IFNKQ9P0W0 207 aa12.98□□□□□ -0.33
CCDC87-201ENST00000333861 NALCNQ8IZF0 1738 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 ME1P48163 572 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 GTF2A1P52655 376 aaPredicted RBP12.97□□□□□ -0.33
CCDC87-201ENST00000333861 SSH3Q8TE77 659 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC87-201ENST00000333861 FANCGO15287 622 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 TEFQ10587 303 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 TEX35Q5T0J7 233 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 Q6ZUG5 572 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 EAF2Q96CJ1 260 aaPredicted RBP12.97□□□□□ -0.33
CCDC87-201ENST00000333861 DRC1Q96MC2 740 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 USP28Q96RU2 1077 aa12.97□□□□□ -0.33
CCDC87-201ENST00000333861 NOP2P46087 812 aaKnown RBP12.96□□□□□ -0.33
CCDC87-201ENST00000333861 APOBRQ0VD83 1088 aa12.96□□□□□ -0.33
CCDC87-201ENST00000333861 NECTIN1Q15223 517 aa12.96□□□□□ -0.33
CCDC87-201ENST00000333861 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.96□□□□□ -0.33
CCDC87-201ENST00000333861 C9orf78Q9NZ63 289 aaPredicted RBP12.96□□□□□ -0.33
CCDC87-201ENST00000333861 E2F4Q16254 413 aa12.96□□□□□ -0.33
CCDC87-201ENST00000333861 HSP90AB3PQ58FF7 597 aa12.96□□□□□ -0.33
CCDC87-201ENST00000333861 DHX40Q8IX18 779 aaKnown RBP12.96□□□□□ -0.33
CCDC87-201ENST00000333861 XPO4Q9C0E2 1151 aaKnown RBP12.96□□□□□ -0.33
CCDC87-201ENST00000333861 DPCR1Q3MIW9 517 aa12.95□□□□□ -0.34
CCDC87-201ENST00000333861 CLASRPQ8N2M8 674 aaKnown RBP12.95□□□□□ -0.34
CCDC87-201ENST00000333861 FSIP1Q8NA03 581 aa12.95□□□□□ -0.34
CCDC87-201ENST00000333861 MNS1Q8NEH6 495 aa12.95□□□□□ -0.34
CCDC87-201ENST00000333861 KIF20BQ96Q89 1820 aa12.95□□□□□ -0.34
CCDC87-201ENST00000333861 SMC1AQ14683 1233 aaKnown RBP12.95□□□□□ -0.34
CCDC87-201ENST00000333861 WWC2Q6AWC2 1192 aa12.95□□□□□ -0.34
CCDC87-201ENST00000333861 ARMCX5Q6P1M9 558 aa12.95□□□□□ -0.34
CCDC87-201ENST00000333861 MPRIPQ6WCQ1 1025 aa12.95□□□□□ -0.34
CCDC87-201ENST00000333861 NBPF11Q86T75 865 aa12.95□□□□□ -0.34
CCDC87-201ENST00000333861 SDF4Q9BRK5 362 aa12.95□□□□□ -0.34
CCDC87-201ENST00000333861 ORC3Q9UBD5 711 aaPredicted RBP12.95□□□□□ -0.34
CCDC87-201ENST00000333861 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
CCDC87-201ENST00000333861 ZRANB2O95218 330 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC87-201ENST00000333861 DPF2Q92785 391 aa12.94□□□□□ -0.34
CCDC87-201ENST00000333861 HINFPQ9BQA5 517 aa12.94□□□□□ -0.34
CCDC87-201ENST00000333861 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
CCDC87-201ENST00000333861 ANKARQ7Z5J8 1434 aa12.94□□□□□ -0.34
CCDC87-201ENST00000333861 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
CCDC87-201ENST00000333861 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
CCDC87-201ENST00000333861 DDX46Q7L014 1031 aaKnown RBP12.94□□□□□ -0.34
CCDC87-201ENST00000333861 A0A0U1RQJ8 604 aa12.93□□□□□ -0.34
CCDC87-201ENST00000333861 REXO1L1PQ8IX06 675 aa12.93□□□□□ -0.34
CCDC87-201ENST00000333861 ATRIPQ8WXE1 791 aa12.93□□□□□ -0.34
CCDC87-201ENST00000333861 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
CCDC87-201ENST00000333861 ECHDC1Q9NTX5 307 aa12.93□□□□□ -0.34
CCDC87-201ENST00000333861 RRP15Q9Y3B9 282 aaKnown RBP12.93□□□□□ -0.34
CCDC87-201ENST00000333861 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
CCDC87-201ENST00000333861 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
CCDC87-201ENST00000333861 TBC1D8O95759 1140 aa12.93□□□□□ -0.34
CCDC87-201ENST00000333861 SCRN1Q12765 414 aa12.93□□□□□ -0.34
CCDC87-201ENST00000333861 TXLNBQ8N3L3 684 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms