RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
SNX20-202ENST00000330943 HDAC5Q9UQL6 1122 aa16.92■□□□□ 0.3
SNX20-202ENST00000330943 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
SNX20-202ENST00000330943 ANO10Q9NW15 660 aa16.92■□□□□ 0.3
SNX20-202ENST00000330943 ERBB3P21860 1342 aa16.92■□□□□ 0.3
SNX20-202ENST00000330943 JCADQ9P266 1359 aa16.92■□□□□ 0.3
SNX20-202ENST00000330943 GRM8O00222 908 aa16.91■□□□□ 0.3
SNX20-202ENST00000330943 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
SNX20-202ENST00000330943 ST7Q9NRC1 585 aa16.91■□□□□ 0.3
SNX20-202ENST00000330943 ADD1P35611 737 aaKnown RBP16.91■□□□□ 0.3
SNX20-202ENST00000330943 SCRN1Q12765 414 aa16.91■□□□□ 0.3
SNX20-202ENST00000330943 SNW1Q13573 536 aaKnown RBP16.91■□□□□ 0.3
SNX20-202ENST00000330943 CEP57L1Q8IYX8 460 aa16.91■□□□□ 0.3
SNX20-202ENST00000330943 ORAI2Q96SN7 254 aa16.91■□□□□ 0.3
SNX20-202ENST00000330943 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
SNX20-202ENST00000330943 MPRIPQ6WCQ1 1025 aa16.9■□□□□ 0.3
SNX20-202ENST00000330943 LRRC59Q96AG4 307 aaKnown RBP16.9■□□□□ 0.3
SNX20-202ENST00000330943 RCOR1Q9UKL0 485 aa16.9■□□□□ 0.3
SNX20-202ENST00000330943 TBX22Q9Y458 520 aa16.9■□□□□ 0.3
SNX20-202ENST00000330943 COL15A1P39059 1388 aa16.9■□□□□ 0.3
SNX20-202ENST00000330943 MED1Q15648 1581 aaPredicted RBP16.9■□□□□ 0.3
SNX20-202ENST00000330943 USPL1Q5W0Q7 1092 aa16.9■□□□□ 0.3
SNX20-202ENST00000330943 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
SNX20-202ENST00000330943 USP28Q96RU2 1077 aa16.9■□□□□ 0.3
SNX20-202ENST00000330943 NDUFB9Q9Y6M9 179 aa16.9■□□□□ 0.3
SNX20-202ENST00000330943 ERICH4A6NGS2 130 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 PPFIA3O75145 1194 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 CHGBP05060 677 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 ME1P48163 572 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 AIMP1Q12904 312 aaKnown RBP16.89■□□□□ 0.29
SNX20-202ENST00000330943 SLFNL1Q499Z3 407 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 FSIP1Q8NA03 581 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 SYTL4Q96C24 671 aaPredicted RBP16.89■□□□□ 0.29
SNX20-202ENST00000330943 CCDC66A2RUB6 948 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 PRAMEF22A3QJZ6 481 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 GSDMDP57764 484 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 FAM160A1Q05DH4 1040 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 ZNF446Q9NWS9 450 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 FAM53CQ9NYF3 392 aa16.89■□□□□ 0.29
SNX20-202ENST00000330943 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
SNX20-202ENST00000330943 ZNF530Q6P9A1 599 aaPredicted RBP16.88■□□□□ 0.29
SNX20-202ENST00000330943 LINS1Q8NG48 757 aa16.88■□□□□ 0.29
SNX20-202ENST00000330943 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
SNX20-202ENST00000330943 DIP2AQ14689 1571 aa16.88■□□□□ 0.29
SNX20-202ENST00000330943 KIF2AO00139 706 aaPredicted RBP16.88■□□□□ 0.29
SNX20-202ENST00000330943 CYP21A2P08686 494 aa16.88■□□□□ 0.29
SNX20-202ENST00000330943 ERCC6LQ2NKX8 1250 aa16.88■□□□□ 0.29
SNX20-202ENST00000330943 SMARCC2Q8TAQ2 1214 aa16.88■□□□□ 0.29
SNX20-202ENST00000330943 SEC62Q99442 399 aaKnown RBP16.88■□□□□ 0.29
SNX20-202ENST00000330943 ZBTB22O15209 634 aa16.87■□□□□ 0.29
SNX20-202ENST00000330943 GUCY1B3Q02153 619 aa16.87■□□□□ 0.29
SNX20-202ENST00000330943 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
SNX20-202ENST00000330943 NSUN7Q8NE18 718 aaKnown RBP16.87■□□□□ 0.29
SNX20-202ENST00000330943 ENGASEQ8NFI3 743 aa16.87■□□□□ 0.29
SNX20-202ENST00000330943 NAT10Q9H0A0 1025 aaKnown RBP16.87■□□□□ 0.29
SNX20-202ENST00000330943 PTPDC1A2A3K4 754 aa16.87■□□□□ 0.29
SNX20-202ENST00000330943 PSME1Q06323 249 aa16.87■□□□□ 0.29
SNX20-202ENST00000330943 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
SNX20-202ENST00000330943 NAP1L2Q9ULW6 460 aaPredicted RBP16.87■□□□□ 0.29
SNX20-202ENST00000330943 E4F1Q66K89 784 aaPredicted RBP16.86■□□□□ 0.29
SNX20-202ENST00000330943 SYT10Q6XYQ8 523 aa16.86■□□□□ 0.29
SNX20-202ENST00000330943 BBXQ8WY36 941 aaPredicted RBP16.86■□□□□ 0.29
SNX20-202ENST00000330943 SMC2O95347 1197 aa16.86■□□□□ 0.29
SNX20-202ENST00000330943 CCT2P78371 535 aaKnown RBP16.86■□□□□ 0.29
SNX20-202ENST00000330943 LRRN4CLQ8ND94 238 aa16.86■□□□□ 0.29
SNX20-202ENST00000330943 PPP1R13BQ96KQ4 1090 aa16.86■□□□□ 0.29
SNX20-202ENST00000330943 ZNF396Q96N95 335 aaPredicted RBP16.86■□□□□ 0.29
SNX20-202ENST00000330943 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
SNX20-202ENST00000330943 SDF4Q9BRK5 362 aa16.86■□□□□ 0.29
SNX20-202ENST00000330943 U3KPZ7 1027 aaPredicted RBP16.86■□□□□ 0.29
SNX20-202ENST00000330943 MARF1Q9Y4F3 1742 aaKnown RBP16.86■□□□□ 0.29
SNX20-202ENST00000330943 PFKFB2O60825 505 aa16.86■□□□□ 0.29
SNX20-202ENST00000330943 APOBRQ0VD83 1088 aa16.86■□□□□ 0.29
SNX20-202ENST00000330943 LLPHQ9BRT6 129 aaKnown RBP16.86■□□□□ 0.29
SNX20-202ENST00000330943 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
SNX20-202ENST00000330943 KCND1Q9NSA2 647 aa16.86■□□□□ 0.29
SNX20-202ENST00000330943 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
SNX20-202ENST00000330943 ZNF609O15014 1411 aa16.85■□□□□ 0.29
SNX20-202ENST00000330943 CTDNEP1O95476 244 aa16.85■□□□□ 0.29
SNX20-202ENST00000330943 TMC6Q7Z403 805 aa16.85■□□□□ 0.29
SNX20-202ENST00000330943 NCOA5Q9HCD5 579 aaKnown RBP16.85■□□□□ 0.29
SNX20-202ENST00000330943 ZRSR1Q15695 479 aaKnown RBP16.84■□□□□ 0.29
SNX20-202ENST00000330943 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
SNX20-202ENST00000330943 STOX1Q6ZVD7 989 aa16.84■□□□□ 0.29
SNX20-202ENST00000330943 XPO4Q9C0E2 1151 aaKnown RBP16.84■□□□□ 0.29
SNX20-202ENST00000330943 L2HGDHQ9H9P8 463 aa16.84■□□□□ 0.29
SNX20-202ENST00000330943 IFNKQ9P0W0 207 aa16.84■□□□□ 0.29
SNX20-202ENST00000330943 IMPACTQ9P2X3 320 aa16.84■□□□□ 0.29
SNX20-202ENST00000330943 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
SNX20-202ENST00000330943 PHF8Q9UPP1 1060 aa16.84■□□□□ 0.29
SNX20-202ENST00000330943 H2AFXP16104 143 aaPredicted RBP16.84■□□□□ 0.29
SNX20-202ENST00000330943 BMS1Q14692 1282 aaKnown RBP16.84■□□□□ 0.29
SNX20-202ENST00000330943 ARMCX5Q6P1M9 558 aa16.84■□□□□ 0.29
SNX20-202ENST00000330943 UTYO14607 1347 aa16.84■□□□□ 0.29
SNX20-202ENST00000330943 A0A1B0GVL5 298 aa16.83■□□□□ 0.29
SNX20-202ENST00000330943 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.29
SNX20-202ENST00000330943 SFPQP23246 707 aaKnown RBP eCLIP16.83■□□□□ 0.29
SNX20-202ENST00000330943 DPCR1Q3MIW9 517 aa16.83■□□□□ 0.29
SNX20-202ENST00000330943 ANKLE2Q86XL3 938 aa16.83■□□□□ 0.29
SNX20-202ENST00000330943 MRPS27Q92552 414 aaKnown RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms