RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 UBASH3AP57075 661 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 WDR24Q96S15 920 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 CAMSAP1Q5T5Y3 1602 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 YEATS2Q9ULM3 1422 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 PI4KAP2A4QPH2 592 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 N4BP1O75113 896 aaKnown RBP23.87■■□□□ 1.41
CMTM4-201ENST00000330687 CHGBP05060 677 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 FAM193AP78312 1265 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 FAM160A1Q05DH4 1040 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 CCDC93Q567U6 631 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 CCDC129Q6ZRS4 1044 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 PI4KAP1Q8N8J0 262 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 ACTN2P35609 894 aa23.86■■□□□ 1.41
CMTM4-201ENST00000330687 TM6SF1Q9BZW5 370 aa23.86■■□□□ 1.41
CMTM4-201ENST00000330687 EFCAB8A8MWE9 144 aa23.86■■□□□ 1.41
CMTM4-201ENST00000330687 RHOXF2BP0C7M4 288 aa23.86■■□□□ 1.41
CMTM4-201ENST00000330687 IBSPP21815 317 aaPredicted RBP23.86■■□□□ 1.41
CMTM4-201ENST00000330687 LONRF2Q1L5Z9 754 aa23.86■■□□□ 1.41
CMTM4-201ENST00000330687 MUM1L1Q5H9M0 696 aa23.86■■□□□ 1.41
CMTM4-201ENST00000330687 RHOXF2Q9BQY4 288 aa23.86■■□□□ 1.41
CMTM4-201ENST00000330687 NRXN1Q9ULB1 1477 aa23.86■■□□□ 1.41
CMTM4-201ENST00000330687 A0A1B0GUL7 405 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 ZNF589Q86UQ0 364 aaPredicted RBP23.85■■□□□ 1.41
CMTM4-201ENST00000330687 CD163L1Q9NR16 1453 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 TTC21BQ7Z4L5 1316 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 VWDEQ8N2E2 1590 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 MYO3AQ8NEV4 1616 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 FANCCQ00597 558 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 REXO1L1PQ8IX06 675 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 ATP7AQ04656 1500 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 USP32Q8NFA0 1604 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 TOP1P11387 765 aaKnown RBP23.85■■□□□ 1.41
CMTM4-201ENST00000330687 CCDC158Q5M9N0 1113 aa23.85■■□□□ 1.41
CMTM4-201ENST00000330687 IRX2Q9BZI1 471 aaPredicted RBP23.85■■□□□ 1.41
CMTM4-201ENST00000330687 FANCAO15360 1455 aa23.84■■□□□ 1.41
CMTM4-201ENST00000330687 PSDA5PKW4 1024 aaPredicted RBP23.84■■□□□ 1.41
CMTM4-201ENST00000330687 SLC3A2P08195 630 aaKnown RBP23.84■■□□□ 1.41
CMTM4-201ENST00000330687 LZTFL1Q9NQ48 299 aa23.84■■□□□ 1.41
CMTM4-201ENST00000330687 NDUFA8P51970 172 aa23.84■■□□□ 1.41
CMTM4-201ENST00000330687 HSP90B2PQ58FF3 399 aa23.84■■□□□ 1.41
CMTM4-201ENST00000330687 PACS2Q86VP3 889 aa23.84■■□□□ 1.41
CMTM4-201ENST00000330687 FAN1Q9Y2M0 1017 aa23.84■■□□□ 1.41
CMTM4-201ENST00000330687 AOX1Q06278 1338 aa23.84■■□□□ 1.41
CMTM4-201ENST00000330687 NUDT16Q96DE0 195 aaKnown RBP23.84■■□□□ 1.41
CMTM4-201ENST00000330687 EVI5LQ96CN4 794 aa23.83■■□□□ 1.41
CMTM4-201ENST00000330687 EP400NLQ6ZTU2 488 aa23.83■■□□□ 1.41
CMTM4-201ENST00000330687 DPF2Q92785 391 aa23.83■■□□□ 1.41
CMTM4-201ENST00000330687 FANCGO15287 622 aa23.82■■□□□ 1.4
CMTM4-201ENST00000330687 APOBRQ0VD83 1088 aa23.82■■□□□ 1.4
CMTM4-201ENST00000330687 OSBPL5Q9H0X9 879 aaPredicted RBP23.82■■□□□ 1.4
CMTM4-201ENST00000330687 PARP3Q9Y6F1 533 aa23.82■■□□□ 1.4
CMTM4-201ENST00000330687 KLHDC4Q8TBB5 520 aa23.82■■□□□ 1.4
CMTM4-201ENST00000330687 MRPS27Q92552 414 aaKnown RBP23.82■■□□□ 1.4
CMTM4-201ENST00000330687 DHX58Q96C10 678 aa23.82■■□□□ 1.4
CMTM4-201ENST00000330687 NEK1Q96PY6 1258 aa23.82■■□□□ 1.4
CMTM4-201ENST00000330687 MICALL1Q8N3F8 863 aa23.82■■□□□ 1.4
CMTM4-201ENST00000330687 TLR7Q9NYK1 1049 aaKnown RBP23.82■■□□□ 1.4
CMTM4-201ENST00000330687 SETBP1Q9Y6X0 1596 aa23.82■■□□□ 1.4
CMTM4-201ENST00000330687 CPSF1Q10570 1443 aaKnown RBP23.82■■□□□ 1.4
CMTM4-201ENST00000330687 TMEM232C9JQI7 657 aa23.81■■□□□ 1.4
CMTM4-201ENST00000330687 TPM1P09493 284 aa23.81■■□□□ 1.4
CMTM4-201ENST00000330687 AMPHP49418 695 aa23.81■■□□□ 1.4
CMTM4-201ENST00000330687 JAKMIP3Q5VZ66 844 aa23.81■■□□□ 1.4
CMTM4-201ENST00000330687 FBXO31Q5XUX0 539 aaPredicted RBP23.81■■□□□ 1.4
CMTM4-201ENST00000330687 ZNF396Q96N95 335 aaPredicted RBP23.81■■□□□ 1.4
CMTM4-201ENST00000330687 EIF3CLB5ME19 914 aaKnown RBP23.81■■□□□ 1.4
CMTM4-201ENST00000330687 MARCKSP29966 332 aaPredicted RBP23.81■■□□□ 1.4
CMTM4-201ENST00000330687 ADKP55263 362 aaKnown RBP23.81■■□□□ 1.4
CMTM4-201ENST00000330687 HSP90AB4PQ58FF6 505 aa23.81■■□□□ 1.4
CMTM4-201ENST00000330687 NUTM2GQ5VZR2 741 aa23.81■■□□□ 1.4
CMTM4-201ENST00000330687 CPLX3Q8WVH0 158 aa23.81■■□□□ 1.4
CMTM4-201ENST00000330687 MAP4K1Q92918 833 aa23.81■■□□□ 1.4
CMTM4-201ENST00000330687 EIF3CQ99613 913 aaKnown RBP23.81■■□□□ 1.4
CMTM4-201ENST00000330687 ZSCAN16Q9H4T2 348 aaPredicted RBP23.81■■□□□ 1.4
CMTM4-201ENST00000330687 IMPACTQ9P2X3 320 aa23.81■■□□□ 1.4
CMTM4-201ENST00000330687 EPB41L2O43491 1005 aaKnown RBP23.8■■□□□ 1.4
CMTM4-201ENST00000330687 GDAP1L1Q96MZ0 367 aa23.8■■□□□ 1.4
CMTM4-201ENST00000330687 PCDHA7Q9UN72 937 aa23.8■■□□□ 1.4
CMTM4-201ENST00000330687 PTPDC1A2A3K4 754 aa23.8■■□□□ 1.4
CMTM4-201ENST00000330687 TFRCP02786 760 aaKnown RBP23.8■■□□□ 1.4
CMTM4-201ENST00000330687 PRR29P0C7W0 189 aa23.8■■□□□ 1.4
CMTM4-201ENST00000330687 SCRN1Q12765 414 aa23.8■■□□□ 1.4
CMTM4-201ENST00000330687 GPR161Q8N6U8 529 aaKnown RBP23.8■■□□□ 1.4
CMTM4-201ENST00000330687 SLC26A8Q96RN1 970 aa23.8■■□□□ 1.4
CMTM4-201ENST00000330687 FUT8Q9BYC5 575 aa23.8■■□□□ 1.4
CMTM4-201ENST00000330687 MAP3K19Q56UN5 1328 aa23.79■■□□□ 1.4
CMTM4-201ENST00000330687 IL17RAQ96F46 866 aa23.79■■□□□ 1.4
CMTM4-201ENST00000330687 SRRTQ9BXP5 876 aaKnown RBP23.79■■□□□ 1.4
CMTM4-201ENST00000330687 CCP110O43303 1012 aa23.79■■□□□ 1.4
CMTM4-201ENST00000330687 ZSCAN12O43309 604 aa23.79■■□□□ 1.4
CMTM4-201ENST00000330687 G3BP1Q13283 466 aaKnown RBP eCLIP23.79■■□□□ 1.4
CMTM4-201ENST00000330687 ERC1Q8IUD2 1116 aa23.79■■□□□ 1.4
CMTM4-201ENST00000330687 GOLGA1Q92805 767 aa23.79■■□□□ 1.4
CMTM4-201ENST00000330687 KIAA1468Q9P260 1216 aa23.79■■□□□ 1.4
CMTM4-201ENST00000330687 PPP2R2CQ9Y2T4 447 aa23.79■■□□□ 1.4
CMTM4-201ENST00000330687 MTX1Q13505 466 aa23.78■■□□□ 1.4
CMTM4-201ENST00000330687 TRIM65Q6PJ69 517 aa23.78■■□□□ 1.4
CMTM4-201ENST00000330687 EXOC4Q96A65 974 aa23.78■■□□□ 1.4
CMTM4-201ENST00000330687 AIMP1Q12904 312 aaKnown RBP23.78■■□□□ 1.4
CMTM4-201ENST00000330687 GJB4Q9NTQ9 266 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms