RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 PDE8AO60658 829 aa19.07■□□□□ 0.64
PGBD2-201ENST00000329291 HCLS1P14317 486 aaPredicted RBP19.07■□□□□ 0.64
PGBD2-201ENST00000329291 LDHAL6AQ6ZMR3 332 aa19.07■□□□□ 0.64
PGBD2-201ENST00000329291 GZF1Q9H116 711 aaPredicted RBP19.07■□□□□ 0.64
PGBD2-201ENST00000329291 ATRNO75882 1429 aa19.06■□□□□ 0.64
PGBD2-201ENST00000329291 IFIT1P09914 478 aaKnown RBP19.06■□□□□ 0.64
PGBD2-201ENST00000329291 CHAMP1Q96JM3 812 aa19.06■□□□□ 0.64
PGBD2-201ENST00000329291 SCARF1Q14162 830 aa19.06■□□□□ 0.64
PGBD2-201ENST00000329291 SMIM5Q71RC9 77 aa19.06■□□□□ 0.64
PGBD2-201ENST00000329291 INTS4Q96HW7 963 aaKnown RBP19.06■□□□□ 0.64
PGBD2-201ENST00000329291 TM6SF1Q9BZW5 370 aa19.06■□□□□ 0.64
PGBD2-201ENST00000329291 ANKRD18BA2A2Z9 1011 aa19.05■□□□□ 0.64
PGBD2-201ENST00000329291 FAM182BQ5T319 152 aa19.05■□□□□ 0.64
PGBD2-201ENST00000329291 LINC00116Q8NCU8 138 aa19.05■□□□□ 0.64
PGBD2-201ENST00000329291 RIC1Q4ADV7 1423 aa19.05■□□□□ 0.64
PGBD2-201ENST00000329291 LARGE1O95461 756 aa19.04■□□□□ 0.64
PGBD2-201ENST00000329291 MCMDC2Q4G0Z9 681 aa19.04■□□□□ 0.64
PGBD2-201ENST00000329291 FOXD4L5Q5VV16 416 aaPredicted RBP19.04■□□□□ 0.64
PGBD2-201ENST00000329291 FOXD4L4Q8WXT5 416 aaPredicted RBP19.04■□□□□ 0.64
PGBD2-201ENST00000329291 PDRG1Q9NUG6 133 aa19.04■□□□□ 0.64
PGBD2-201ENST00000329291 AKAP2Q9Y2D5 859 aa19.04■□□□□ 0.64
PGBD2-201ENST00000329291 COL5A3P25940 1745 aaPredicted RBP19.04■□□□□ 0.64
PGBD2-201ENST00000329291 ZKSCAN1P17029 563 aaPredicted RBP19.04■□□□□ 0.64
PGBD2-201ENST00000329291 METTL24Q5JXM2 366 aa19.04■□□□□ 0.64
PGBD2-201ENST00000329291 USPL1Q5W0Q7 1092 aa19.04■□□□□ 0.64
PGBD2-201ENST00000329291 LIMCH1Q9UPQ0 1083 aa19.04■□□□□ 0.64
PGBD2-201ENST00000329291 NHSQ6T4R5 1651 aa19.04■□□□□ 0.64
PGBD2-201ENST00000329291 RFX7Q2KHR2 1363 aa19.03■□□□□ 0.64
PGBD2-201ENST00000329291 DTNBO60941 627 aa19.03■□□□□ 0.64
PGBD2-201ENST00000329291 VPS53Q5VIR6 699 aa19.03■□□□□ 0.64
PGBD2-201ENST00000329291 VGLL2Q8N8G2 317 aa19.03■□□□□ 0.64
PGBD2-201ENST00000329291 CYP46A1Q9Y6A2 500 aa19.03■□□□□ 0.64
PGBD2-201ENST00000329291 ONECUT3O60422 494 aaPredicted RBP19.03■□□□□ 0.64
PGBD2-201ENST00000329291 FKBP4Q02790 459 aaKnown RBP eCLIP19.03■□□□□ 0.64
PGBD2-201ENST00000329291 PI16Q6UXB8 463 aa19.03■□□□□ 0.64
PGBD2-201ENST00000329291 CNNM1Q9NRU3 951 aa19.03■□□□□ 0.64
PGBD2-201ENST00000329291 RPAP1Q9BWH6 1393 aaPredicted RBP19.02■□□□□ 0.64
PGBD2-201ENST00000329291 GORABQ5T7V8 394 aa19.02■□□□□ 0.64
PGBD2-201ENST00000329291 UTP14AQ9BVJ6 771 aaKnown RBP19.02■□□□□ 0.64
PGBD2-201ENST00000329291 ATP2B3Q16720 1220 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 PARP10Q53GL7 1025 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 CCDC158Q5M9N0 1113 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 TTC39AQ5SRH9 613 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 IL27Q8NEV9 243 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.01■□□□□ 0.63
PGBD2-201ENST00000329291 NIP7Q9Y221 180 aaKnown RBP eCLIP19.01■□□□□ 0.63
PGBD2-201ENST00000329291 ZNF652Q9Y2D9 606 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 SH3TC1Q8TE82 1336 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 CNTNAP4Q9C0A0 1308 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 ZMYM1Q5SVZ6 1142 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 MCTP1Q6DN14 999 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 SEPT12Q8IYM1 358 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 HELBQ8NG08 1087 aaPredicted RBP19.01■□□□□ 0.63
PGBD2-201ENST00000329291 TCEANC2Q96MN5 208 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 SEC31BQ9NQW1 1179 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 BTAF1O14981 1849 aa19.01■□□□□ 0.63
PGBD2-201ENST00000329291 BRD1O95696 1058 aa19■□□□□ 0.63
PGBD2-201ENST00000329291 AK7Q96M32 723 aa19■□□□□ 0.63
PGBD2-201ENST00000329291 RNF113AO15541 343 aaKnown RBP19■□□□□ 0.63
PGBD2-201ENST00000329291 NTSR2O95665 410 aa19■□□□□ 0.63
PGBD2-201ENST00000329291 ZAP70P43403 619 aa19■□□□□ 0.63
PGBD2-201ENST00000329291 TSGA10IPQ3SY00 556 aa19■□□□□ 0.63
PGBD2-201ENST00000329291 ST3GAL1Q11201 340 aa18.99■□□□□ 0.63
PGBD2-201ENST00000329291 RNF20Q5VTR2 975 aa18.99■□□□□ 0.63
PGBD2-201ENST00000329291 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
PGBD2-201ENST00000329291 HELLSQ9NRZ9 838 aa18.99■□□□□ 0.63
PGBD2-201ENST00000329291 SNAP23O00161 211 aa18.98■□□□□ 0.63
PGBD2-201ENST00000329291 PDE8BO95263 885 aa18.98■□□□□ 0.63
PGBD2-201ENST00000329291 TPCN1Q9ULQ1 816 aa18.98■□□□□ 0.63
PGBD2-201ENST00000329291 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
PGBD2-201ENST00000329291 M0R2C6 588 aa18.98■□□□□ 0.63
PGBD2-201ENST00000329291 CYP21A2P08686 494 aa18.98■□□□□ 0.63
PGBD2-201ENST00000329291 ME3Q16798 604 aa18.98■□□□□ 0.63
PGBD2-201ENST00000329291 RC3H1Q5TC82 1133 aaKnown RBP18.98■□□□□ 0.63
PGBD2-201ENST00000329291 OSBP2Q969R2 916 aa18.98■□□□□ 0.63
PGBD2-201ENST00000329291 MAST3O60307 1309 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 HSP90B1P14625 803 aaKnown RBP18.97■□□□□ 0.63
PGBD2-201ENST00000329291 RPS6KB1P23443 525 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 PSMA5P28066 241 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 MCAMP43121 646 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 CLEC4GQ6UXB4 293 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 LMBRD1Q9NUN5 540 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 HMG20BQ9P0W2 317 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 CCNL1Q9UK58 526 aaPredicted RBP18.97■□□□□ 0.63
PGBD2-201ENST00000329291 MYH3P11055 1940 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 CCDC83Q8IWF9 413 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 NECAB1Q8N987 351 aa18.97■□□□□ 0.63
PGBD2-201ENST00000329291 U3KPZ7 1027 aaPredicted RBP18.97■□□□□ 0.63
PGBD2-201ENST00000329291 TOB2Q14106 344 aaPredicted RBP18.96■□□□□ 0.63
PGBD2-201ENST00000329291 BLOC1S2Q6QNY1 142 aa18.96■□□□□ 0.63
PGBD2-201ENST00000329291 STOX1Q6ZVD7 989 aa18.95■□□□□ 0.62
PGBD2-201ENST00000329291 BCORQ6W2J9 1755 aa18.95■□□□□ 0.62
PGBD2-201ENST00000329291 HSPD1P10809 573 aaKnown RBP18.95■□□□□ 0.62
PGBD2-201ENST00000329291 FGFR2P21802 821 aa18.95■□□□□ 0.62
PGBD2-201ENST00000329291 PHKA1P46020 1223 aa18.95■□□□□ 0.62
PGBD2-201ENST00000329291 C3orf67Q6ZVT6 689 aa18.95■□□□□ 0.62
PGBD2-201ENST00000329291 TICAM2Q86XR7 235 aa18.95■□□□□ 0.62
PGBD2-201ENST00000329291 GOLGA6L22H0YM25 854 aa18.94■□□□□ 0.62
PGBD2-201ENST00000329291 RGL2O15211 777 aa18.94■□□□□ 0.62
PGBD2-201ENST00000329291 ZSCAN31Q96LW9 406 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms