RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 CDC37L1Q7L3B6 337 aa22.71■■□□□ 1.23
PTPMT1-201ENST00000326656 WDR63Q8IWG1 891 aa22.71■■□□□ 1.23
PTPMT1-201ENST00000326656 DBNDD1Q9H9R9 158 aa22.71■■□□□ 1.23
PTPMT1-201ENST00000326656 ANKIB1Q9P2G1 1089 aa22.71■■□□□ 1.23
PTPMT1-201ENST00000326656 TRAF5O00463 557 aa22.7■■□□□ 1.22
PTPMT1-201ENST00000326656 PSMD14O00487 310 aa22.7■■□□□ 1.22
PTPMT1-201ENST00000326656 ECE2O60344 883 aa22.7■■□□□ 1.22
PTPMT1-201ENST00000326656 CTCFP49711 727 aaPredicted RBP22.7■■□□□ 1.22
PTPMT1-201ENST00000326656 ANKRD18AQ8IVF6 992 aa22.7■■□□□ 1.22
PTPMT1-201ENST00000326656 MICALL2Q8IY33 904 aa22.7■■□□□ 1.22
PTPMT1-201ENST00000326656 GGA1Q9UJY5 639 aa22.7■■□□□ 1.22
PTPMT1-201ENST00000326656 TLL2Q9Y6L7 1015 aa22.7■■□□□ 1.22
PTPMT1-201ENST00000326656 COL4A1P02462 1669 aa22.69■■□□□ 1.22
PTPMT1-201ENST00000326656 FOXN1O15353 648 aa22.69■■□□□ 1.22
PTPMT1-201ENST00000326656 HHIPL1Q96JK4 782 aa22.69■■□□□ 1.22
PTPMT1-201ENST00000326656 CDC5LQ99459 802 aaKnown RBP22.69■■□□□ 1.22
PTPMT1-201ENST00000326656 RTL9Q8NET4 1388 aa22.68■■□□□ 1.22
PTPMT1-201ENST00000326656 XDHP47989 1333 aa22.68■■□□□ 1.22
PTPMT1-201ENST00000326656 G3V3G9 751 aa22.68■■□□□ 1.22
PTPMT1-201ENST00000326656 UFL1O94874 794 aa22.68■■□□□ 1.22
PTPMT1-201ENST00000326656 FMR1Q06787 632 aaKnown RBP eCLIP22.68■■□□□ 1.22
PTPMT1-201ENST00000326656 DCAF8Q5TAQ9 597 aa22.68■■□□□ 1.22
PTPMT1-201ENST00000326656 ZBTB12Q9Y330 459 aaPredicted RBP22.68■■□□□ 1.22
PTPMT1-201ENST00000326656 NEURL1BA8MQ27 555 aa22.67■■□□□ 1.22
PTPMT1-201ENST00000326656 H7C1W4 665 aa22.67■■□□□ 1.22
PTPMT1-201ENST00000326656 VIL1P09327 827 aaKnown RBP22.67■■□□□ 1.22
PTPMT1-201ENST00000326656 CTSWP56202 376 aa22.67■■□□□ 1.22
PTPMT1-201ENST00000326656 DOK7Q18PE1 504 aa22.67■■□□□ 1.22
PTPMT1-201ENST00000326656 TTLL11Q8NHH1 800 aa22.67■■□□□ 1.22
PTPMT1-201ENST00000326656 TRPM4Q8TD43 1214 aa22.67■■□□□ 1.22
PTPMT1-201ENST00000326656 JARID2Q92833 1246 aaPredicted RBP22.67■■□□□ 1.22
PTPMT1-201ENST00000326656 CAPNS2Q96L46 248 aa22.67■■□□□ 1.22
PTPMT1-201ENST00000326656 SAPCD2Q86UD0 394 aa22.66■■□□□ 1.22
PTPMT1-201ENST00000326656 GLIS2Q9BZE0 524 aaPredicted RBP22.66■■□□□ 1.22
PTPMT1-201ENST00000326656 MYH3P11055 1940 aa22.66■■□□□ 1.22
PTPMT1-201ENST00000326656 CELF2O95319 508 aaKnown RBP22.65■■□□□ 1.22
PTPMT1-201ENST00000326656 ATP2B4P23634 1241 aa22.65■■□□□ 1.22
PTPMT1-201ENST00000326656 MAP2K2P36507 400 aa22.65■■□□□ 1.22
PTPMT1-201ENST00000326656 G2E3Q7L622 706 aa22.65■■□□□ 1.22
PTPMT1-201ENST00000326656 BSDC1Q9NW68 430 aaPredicted RBP22.65■■□□□ 1.22
PTPMT1-201ENST00000326656 FANCIQ9NVI1 1328 aa22.64■■□□□ 1.22
PTPMT1-201ENST00000326656 FLIIQ13045 1269 aa22.64■■□□□ 1.21
PTPMT1-201ENST00000326656 CWF19L2Q2TBE0 894 aaKnown RBP22.64■■□□□ 1.21
PTPMT1-201ENST00000326656 GPR101Q96P66 508 aaPredicted RBP22.64■■□□□ 1.21
PTPMT1-201ENST00000326656 CCDC85AQ96PX6 553 aaPredicted RBP22.64■■□□□ 1.21
PTPMT1-201ENST00000326656 KCNQ5Q9NR82 932 aa22.64■■□□□ 1.21
PTPMT1-201ENST00000326656 ZNF609O15014 1411 aa22.64■■□□□ 1.21
PTPMT1-201ENST00000326656 SHTN1A0MZ66 631 aa22.63■■□□□ 1.21
PTPMT1-201ENST00000326656 VAMP4O75379 141 aa22.63■■□□□ 1.21
PTPMT1-201ENST00000326656 SAMD7Q7Z3H4 446 aa22.63■■□□□ 1.21
PTPMT1-201ENST00000326656 PODNQ7Z5L7 613 aa22.63■■□□□ 1.21
PTPMT1-201ENST00000326656 AGBL3Q8NEM8 1001 aa22.63■■□□□ 1.21
PTPMT1-201ENST00000326656 LINS1Q8NG48 757 aa22.63■■□□□ 1.21
PTPMT1-201ENST00000326656 PLA2G12BQ9BX93 195 aa22.63■■□□□ 1.21
PTPMT1-201ENST00000326656 MYH16Q9H6N6 1097 aa22.63■■□□□ 1.21
PTPMT1-201ENST00000326656 THSD7BQ9C0I4 1608 aa22.62■■□□□ 1.21
PTPMT1-201ENST00000326656 GCKRQ14397 625 aa22.62■■□□□ 1.21
PTPMT1-201ENST00000326656 CYP4F22Q6NT55 531 aa22.62■■□□□ 1.21
PTPMT1-201ENST00000326656 PAXIP1Q6ZW49 1069 aaPredicted RBP22.62■■□□□ 1.21
PTPMT1-201ENST00000326656 UBE3BQ7Z3V4 1068 aa22.62■■□□□ 1.21
PTPMT1-201ENST00000326656 BEGAINQ9BUH8 593 aa22.62■■□□□ 1.21
PTPMT1-201ENST00000326656 SCN9AQ15858 1988 aa22.61■■□□□ 1.21
PTPMT1-201ENST00000326656 FKBP5Q13451 457 aaPredicted RBP22.61■■□□□ 1.21
PTPMT1-201ENST00000326656 TBC1D10BQ4KMP7 808 aaPredicted RBP22.61■■□□□ 1.21
PTPMT1-201ENST00000326656 DNAAF4Q8WXU2 420 aa22.61■■□□□ 1.21
PTPMT1-201ENST00000326656 DCPSQ96C86 337 aaKnown RBP22.61■■□□□ 1.21
PTPMT1-201ENST00000326656 GREM2Q9H772 168 aa22.61■■□□□ 1.21
PTPMT1-201ENST00000326656 MINPP1Q9UNW1 487 aa22.61■■□□□ 1.21
PTPMT1-201ENST00000326656 ZNF280AP59817 542 aaPredicted RBP22.6■■□□□ 1.21
PTPMT1-201ENST00000326656 USP48Q86UV5 1035 aa22.6■■□□□ 1.21
PTPMT1-201ENST00000326656 PSME4Q14997 1843 aa22.59■■□□□ 1.21
PTPMT1-201ENST00000326656 LBX1P52954 281 aa22.59■■□□□ 1.21
PTPMT1-201ENST00000326656 RSBN1LQ6PCB5 846 aaPredicted RBP22.59■■□□□ 1.21
PTPMT1-201ENST00000326656 KRT26Q7Z3Y9 468 aa22.59■■□□□ 1.21
PTPMT1-201ENST00000326656 POLR2AP24928 1970 aaKnown RBP22.59■■□□□ 1.21
PTPMT1-201ENST00000326656 EGFRP00533 1210 aa22.58■■□□□ 1.21
PTPMT1-201ENST00000326656 CSF1RP07333 972 aa22.58■■□□□ 1.21
PTPMT1-201ENST00000326656 IGHMBP2P38935 993 aaKnown RBP22.58■■□□□ 1.21
PTPMT1-201ENST00000326656 EXOSC9Q06265 439 aaKnown RBP22.58■■□□□ 1.21
PTPMT1-201ENST00000326656 KIF4BQ2VIQ3 1234 aa22.58■■□□□ 1.21
PTPMT1-201ENST00000326656 LEMD3Q9Y2U8 911 aa22.58■■□□□ 1.21
PTPMT1-201ENST00000326656 MED23Q9ULK4 1368 aa22.58■■□□□ 1.21
PTPMT1-201ENST00000326656 USP17L3A6NCW0 530 aa22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 USP17L4A6NCW7 530 aa22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 CA12O43570 354 aa22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 HSPA8P11142 646 aaKnown RBP22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 MMP14P50281 582 aa22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 CASP7P55210 303 aa22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 RBM26Q5T8P6 1007 aaKnown RBP22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 USP17L1Q7RTZ2 530 aa22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 GMLQ99445 158 aa22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 ANKRD2Q9GZV1 360 aa22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 ZNF408Q9H9D4 720 aa22.57■■□□□ 1.2
PTPMT1-201ENST00000326656 USP17L8P0C7I0 530 aa22.56■■□□□ 1.2
PTPMT1-201ENST00000326656 CCT4P50991 539 aaKnown RBP22.56■■□□□ 1.2
PTPMT1-201ENST00000326656 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
PTPMT1-201ENST00000326656 GRM1Q13255 1194 aa22.55■■□□□ 1.2
PTPMT1-201ENST00000326656 SULF1Q8IWU6 871 aa22.55■■□□□ 1.2
PTPMT1-201ENST00000326656 C2orf69Q8N8R5 385 aa22.55■■□□□ 1.2
PTPMT1-201ENST00000326656 COA1Q9GZY4 146 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms