RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 SLFNL1Q499Z3 407 aa15.59■□□□□ 0.09
LIN28A-202ENST00000326279 CPLX2Q6PUV4 134 aaKnown RBP15.59■□□□□ 0.09
LIN28A-202ENST00000326279 SSH3Q8TE77 659 aa15.59■□□□□ 0.09
LIN28A-202ENST00000326279 PAG1Q9NWQ8 432 aa15.59■□□□□ 0.09
LIN28A-202ENST00000326279 MSNP26038 577 aaKnown RBP15.58■□□□□ 0.08
LIN28A-202ENST00000326279 BRPF1P55201 1214 aaPredicted RBP15.58■□□□□ 0.08
LIN28A-202ENST00000326279 TMX3Q96JJ7 454 aa15.58■□□□□ 0.08
LIN28A-202ENST00000326279 SEC62Q99442 399 aaKnown RBP15.58■□□□□ 0.08
LIN28A-202ENST00000326279 RANBP6O60518 1105 aaKnown RBP15.58■□□□□ 0.08
LIN28A-202ENST00000326279 BCAMP50895 628 aa15.58■□□□□ 0.08
LIN28A-202ENST00000326279 RPS8P62241 208 aaKnown RBP15.58■□□□□ 0.08
LIN28A-202ENST00000326279 NACAP1Q9BZK3 213 aa15.58■□□□□ 0.08
LIN28A-202ENST00000326279 CCT2P78371 535 aaKnown RBP15.57■□□□□ 0.08
LIN28A-202ENST00000326279 ZAP70P43403 619 aa15.57■□□□□ 0.08
LIN28A-202ENST00000326279 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
LIN28A-202ENST00000326279 CWC22Q9HCG8 908 aaKnown RBP15.57■□□□□ 0.08
LIN28A-202ENST00000326279 SPATA31A6Q5VVP1 1343 aa15.57■□□□□ 0.08
LIN28A-202ENST00000326279 MMP10P09238 476 aa15.57■□□□□ 0.08
LIN28A-202ENST00000326279 PICALMQ13492 652 aa15.57■□□□□ 0.08
LIN28A-202ENST00000326279 CSPP1Q1MSJ5 1256 aa15.57■□□□□ 0.08
LIN28A-202ENST00000326279 MAGEB6Q8N7X4 407 aa15.57■□□□□ 0.08
LIN28A-202ENST00000326279 RBM8AQ9Y5S9 174 aaKnown RBP15.57■□□□□ 0.08
LIN28A-202ENST00000326279 SERPINB2P05120 415 aa15.56■□□□□ 0.08
LIN28A-202ENST00000326279 GUCY1B3Q02153 619 aa15.56■□□□□ 0.08
LIN28A-202ENST00000326279 LINC00116Q8NCU8 138 aa15.56■□□□□ 0.08
LIN28A-202ENST00000326279 POLR3DP05423 398 aaPredicted RBP15.56■□□□□ 0.08
LIN28A-202ENST00000326279 IL27Q8NEV9 243 aa15.56■□□□□ 0.08
LIN28A-202ENST00000326279 PCCAP05165 728 aaPredicted RBP15.55■□□□□ 0.08
LIN28A-202ENST00000326279 DOK7Q18PE1 504 aa15.55■□□□□ 0.08
LIN28A-202ENST00000326279 ADCY9O60503 1353 aa15.55■□□□□ 0.08
LIN28A-202ENST00000326279 MPHOSPH10O00566 681 aaKnown RBP15.55■□□□□ 0.08
LIN28A-202ENST00000326279 ZSCAN25Q6NSZ9 544 aa15.55■□□□□ 0.08
LIN28A-202ENST00000326279 DCCP43146 1447 aa15.55■□□□□ 0.08
LIN28A-202ENST00000326279 PDIA6Q15084 440 aa15.54■□□□□ 0.08
LIN28A-202ENST00000326279 RASSF8Q8NHQ8 419 aa15.54■□□□□ 0.08
LIN28A-202ENST00000326279 CREBRFQ8IUR6 639 aa15.54■□□□□ 0.08
LIN28A-202ENST00000326279 DBNLQ9UJU6 430 aaKnown RBP15.54■□□□□ 0.08
LIN28A-202ENST00000326279 CIZ1Q9ULV3 898 aaPredicted RBP15.54■□□□□ 0.08
LIN28A-202ENST00000326279 LIMCH1Q9UPQ0 1083 aa15.54■□□□□ 0.08
LIN28A-202ENST00000326279 IMMTQ16891 758 aaKnown RBP15.53■□□□□ 0.08
LIN28A-202ENST00000326279 ANTXR1Q9H6X2 564 aa15.53■□□□□ 0.08
LIN28A-202ENST00000326279 ZNF213O14771 459 aa15.53■□□□□ 0.08
LIN28A-202ENST00000326279 PHKA1P46020 1223 aa15.53■□□□□ 0.08
LIN28A-202ENST00000326279 PTPN12Q05209 780 aaKnown RBP15.53■□□□□ 0.08
LIN28A-202ENST00000326279 TRIM29Q14134 588 aa15.53■□□□□ 0.08
LIN28A-202ENST00000326279 CPDO75976 1380 aa15.53■□□□□ 0.08
LIN28A-202ENST00000326279 SASH1O94885 1247 aa15.53■□□□□ 0.08
LIN28A-202ENST00000326279 POLD1P28340 1107 aa15.53■□□□□ 0.08
LIN28A-202ENST00000326279 BCS1LQ9Y276 419 aa15.52■□□□□ 0.08
LIN28A-202ENST00000326279 WDR33Q9C0J8 1336 aaKnown RBP15.52■□□□□ 0.08
LIN28A-202ENST00000326279 NAA16Q6N069 864 aaPredicted RBP15.52■□□□□ 0.08
LIN28A-202ENST00000326279 MKNK2Q9HBH9 465 aa15.52■□□□□ 0.08
LIN28A-202ENST00000326279 NRXN3Q9Y4C0 1643 aa15.52■□□□□ 0.08
LIN28A-202ENST00000326279 PRDM1O75626 825 aa15.52■□□□□ 0.07
LIN28A-202ENST00000326279 TTLL11Q8NHH1 800 aa15.52■□□□□ 0.07
LIN28A-202ENST00000326279 RPS6KA4O75676 772 aa15.52■□□□□ 0.07
LIN28A-202ENST00000326279 RBM25P49756 843 aaKnown RBP15.52■□□□□ 0.07
LIN28A-202ENST00000326279 CHRNDQ07001 517 aa15.52■□□□□ 0.07
LIN28A-202ENST00000326279 SLC4A4Q9Y6R1 1079 aa15.52■□□□□ 0.07
LIN28A-202ENST00000326279 MARCH6O60337 910 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 UBAC1Q9BSL1 405 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 TFIP11Q9UBB9 837 aaKnown RBP15.51■□□□□ 0.07
LIN28A-202ENST00000326279 PALD1Q9ULE6 856 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 ITSN1Q15811 1721 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 NRKQ7Z2Y5 1582 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 COL3A1P02461 1466 aaPredicted RBP15.51■□□□□ 0.07
LIN28A-202ENST00000326279 CEMIPQ8WUJ3 1361 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 H0YIN7 160 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 ECM2O94769 699 aaPredicted RBP15.51■□□□□ 0.07
LIN28A-202ENST00000326279 CD2BP2O95400 341 aaKnown RBP15.51■□□□□ 0.07
LIN28A-202ENST00000326279 CHGBP05060 677 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 RXRAP19793 462 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 PUM3Q15397 648 aaKnown RBP15.51■□□□□ 0.07
LIN28A-202ENST00000326279 VSIG10Q8N0Z9 540 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 SLC4A9Q96Q91 983 aa15.51■□□□□ 0.07
LIN28A-202ENST00000326279 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
LIN28A-202ENST00000326279 HIBADHP31937 336 aaKnown RBP15.5■□□□□ 0.07
LIN28A-202ENST00000326279 BRF1Q92994 677 aa15.5■□□□□ 0.07
LIN28A-202ENST00000326279 ZKSCAN3Q9BRR0 538 aa15.5■□□□□ 0.07
LIN28A-202ENST00000326279 COL5A2P05997 1499 aaPredicted RBP15.5■□□□□ 0.07
LIN28A-202ENST00000326279 ERBB4Q15303 1308 aa15.5■□□□□ 0.07
LIN28A-202ENST00000326279 BAG4O95429 457 aaKnown RBP15.5■□□□□ 0.07
LIN28A-202ENST00000326279 PDCP20941 246 aa15.5■□□□□ 0.07
LIN28A-202ENST00000326279 SART3Q15020 963 aaKnown RBP15.5■□□□□ 0.07
LIN28A-202ENST00000326279 CELF1Q92879 486 aaKnown RBP15.5■□□□□ 0.07
LIN28A-202ENST00000326279 ADAMTSL3P82987 1691 aa15.5■□□□□ 0.07
LIN28A-202ENST00000326279 NCOA3Q9Y6Q9 1424 aa15.5■□□□□ 0.07
LIN28A-202ENST00000326279 ANKRD1Q15327 319 aa15.5■□□□□ 0.07
LIN28A-202ENST00000326279 DPP8Q6V1X1 898 aaPredicted RBP15.5■□□□□ 0.07
LIN28A-202ENST00000326279 ARMT1Q9H993 441 aa15.5■□□□□ 0.07
LIN28A-202ENST00000326279 NASPP49321 788 aaPredicted RBP15.49■□□□□ 0.07
LIN28A-202ENST00000326279 EZH2Q15910 746 aaKnown RBP15.49■□□□□ 0.07
LIN28A-202ENST00000326279 GJA3Q9Y6H8 435 aa15.49■□□□□ 0.07
LIN28A-202ENST00000326279 KDM6AO15550 1401 aaPredicted RBP15.49■□□□□ 0.07
LIN28A-202ENST00000326279 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
LIN28A-202ENST00000326279 TTC41PQ6P2S7 1318 aa15.49■□□□□ 0.07
LIN28A-202ENST00000326279 MBD4O95243 580 aa15.49■□□□□ 0.07
LIN28A-202ENST00000326279 UQCRFS1P1P0C7P4 283 aa15.49■□□□□ 0.07
LIN28A-202ENST00000326279 MICU3Q86XE3 530 aa15.49■□□□□ 0.07
LIN28A-202ENST00000326279 C2CD5Q86YS7 1000 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms