RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ANKRD24Q8TF21 1146 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 DDX21Q9NR30 783 aaKnown RBP eCLIP14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 ELP1O95163 1332 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 DEPDC5O75140 1603 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 ABCA9Q8IUA7 1624 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 MROH2AA6NES4 1674 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 ZNF213O14771 459 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 SNRKQ9NRH2 765 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 KLF18A0A0U1RQI7 1052 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 TFCP2Q12800 502 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 CHST3Q7LGC8 479 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 IP6K1Q92551 441 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 CNNM1Q9NRU3 951 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 ARHGEF40Q8TER5 1519 aa14.77□□□□□ -0.04
DNMT3A-202ENST00000321117 UBASH3AP57075 661 aa14.77□□□□□ -0.04
DNMT3A-202ENST00000321117 ATL3Q6DD88 541 aa14.77□□□□□ -0.04
DNMT3A-202ENST00000321117 CNNM3Q8NE01 707 aa14.77□□□□□ -0.04
DNMT3A-202ENST00000321117 MAP4K1Q92918 833 aa14.77□□□□□ -0.04
DNMT3A-202ENST00000321117 NRBP1Q9UHY1 535 aa14.77□□□□□ -0.04
DNMT3A-202ENST00000321117 NEXMIFQ5QGS0 1516 aa14.77□□□□□ -0.04
DNMT3A-202ENST00000321117 MYO3AQ8NEV4 1616 aa14.77□□□□□ -0.04
DNMT3A-202ENST00000321117 ALKQ9UM73 1620 aa14.77□□□□□ -0.04
DNMT3A-202ENST00000321117 SPTLC2O15270 562 aa14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 RNMTO43148 476 aaKnown RBP14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 SYT10Q6XYQ8 523 aa14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 LEKR1Q6ZMV7 388 aa14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 A0A1B0GVL5 298 aa14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 CASQ1P31415 396 aa14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 SYKP43405 635 aa14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 LMBR1LQ6UX01 489 aa14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 LLPHQ9BRT6 129 aaKnown RBP14.77□□□□□ -0.05
DNMT3A-202ENST00000321117 CAMSAP1Q5T5Y3 1602 aa14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 KCNQ3O43525 872 aa14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 ERLIN1O75477 346 aa14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 POLA2Q14181 598 aa14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 GTF3C6Q969F1 213 aa14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 PCMTD1Q96MG8 357 aaPredicted RBP14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 TTC14Q96N46 770 aa14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 IDH1O75874 414 aaKnown RBP14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 DMTNQ08495 405 aa14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 EDC3Q96F86 508 aaKnown RBP14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 AKAP2Q9Y2D5 859 aa14.76□□□□□ -0.05
DNMT3A-202ENST00000321117 BRMS1Q9HCU9 246 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 PAG1Q9NWQ8 432 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 USP6P35125 1406 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 GABPB1Q06547 395 aaPredicted RBP14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 NOM1Q5C9Z4 860 aaKnown RBP14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 TDRD7Q8NHU6 1098 aaKnown RBP14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 ERCC4Q92889 916 aaPredicted RBP14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 TUBB4AP04350 444 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 SNRPA1P09661 255 aaKnown RBP14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 GTF2F1P35269 517 aaKnown RBP eCLIP14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 GNG11P61952 73 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 EIF3JO75822 258 aaKnown RBP14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 ELF2Q15723 593 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 ARHGAP29Q52LW3 1261 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 ANKLE2Q86XL3 938 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 NCOA7Q8NI08 942 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 TMX1Q9H3N1 280 aa14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 NCOA5Q9HCD5 579 aaKnown RBP14.75□□□□□ -0.05
DNMT3A-202ENST00000321117 MARCKSP29966 332 aaPredicted RBP14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 PIP4K2AP48426 406 aaPredicted RBP14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 CCDC102BQ68D86 513 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 DBNDD2Q9BQY9 259 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 SPTLC3Q9NUV7 552 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 NDUFB9Q9Y6M9 179 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 TNNI3KQ59H18 835 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 NAA16Q6N069 864 aaPredicted RBP14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 KIF6Q6ZMV9 814 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 WASF1Q92558 559 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 TRERF1Q96PN7 1200 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 FPGT-TNNI3KV9GXZ4 949 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 NBPF6Q5VWK0 638 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 NBPF4Q96M43 638 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 TIGD1Q96MW7 591 aa14.74□□□□□ -0.05
DNMT3A-202ENST00000321117 GOLGA6L9A6NEM1 432 aa14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 ATF3P18847 181 aa14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 NECTIN1Q15223 517 aa14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 PROSER2Q86WR7 435 aaPredicted RBP14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 NUP133Q8WUM0 1156 aa14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 KIDINS220Q9ULH0 1771 aa14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 EVA1CP58658 441 aa14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 UTP14CQ5TAP6 766 aaKnown RBP14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 CACTINQ8WUQ7 758 aaKnown RBP14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 MRFAP1L1Q96HT8 127 aa14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 ZNF215Q9UL58 517 aaPredicted RBP14.73□□□□□ -0.05
DNMT3A-202ENST00000321117 METTL24Q5JXM2 366 aa14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 LRRC8AQ8IWT6 810 aa14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 TBX22Q9Y458 520 aa14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 KLHL10Q6JEL2 608 aa14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 MICU3Q86XE3 530 aa14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 CCDC47Q96A33 483 aaKnown RBP14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 CWC25Q9NXE8 425 aaPredicted RBP14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 ROBO2Q9HCK4 1378 aa14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 TMEM2Q9UHN6 1383 aa14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 PPLO60437 1756 aa14.72□□□□□ -0.05
DNMT3A-202ENST00000321117 IARSP41252 1262 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms