RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 RASEFQ8IZ41 740 aa19.08■□□□□ 0.64
CLIP4-201ENST00000320081 KDM5CP41229 1560 aa19.08■□□□□ 0.64
CLIP4-201ENST00000320081 CYP7A1P22680 504 aa19.08■□□□□ 0.64
CLIP4-201ENST00000320081 CDC37L1Q7L3B6 337 aa19.08■□□□□ 0.64
CLIP4-201ENST00000320081 ABCC4O15439 1325 aa19.07■□□□□ 0.64
CLIP4-201ENST00000320081 F8W031 263 aaPredicted RBP19.07■□□□□ 0.64
CLIP4-201ENST00000320081 C6orf229H3BNL8 230 aa19.07■□□□□ 0.64
CLIP4-201ENST00000320081 CBFA2T2O43439 604 aa19.07■□□□□ 0.64
CLIP4-201ENST00000320081 PRDM1O75626 825 aa19.07■□□□□ 0.64
CLIP4-201ENST00000320081 CCDC102AQ96A19 550 aa19.07■□□□□ 0.64
CLIP4-201ENST00000320081 INSRP06213 1382 aa19.07■□□□□ 0.64
CLIP4-201ENST00000320081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.07■□□□□ 0.64
CLIP4-201ENST00000320081 SLC27A2O14975 620 aa19.07■□□□□ 0.64
CLIP4-201ENST00000320081 IL15P40933 162 aaPredicted RBP19.07■□□□□ 0.64
CLIP4-201ENST00000320081 EIF4A1P60842 406 aaKnown RBP19.07■□□□□ 0.64
CLIP4-201ENST00000320081 SIRT1Q96EB6 747 aa19.07■□□□□ 0.64
CLIP4-201ENST00000320081 SLC4A4Q9Y6R1 1079 aa19.07■□□□□ 0.64
CLIP4-201ENST00000320081 STIM1Q13586 685 aa19.06■□□□□ 0.64
CLIP4-201ENST00000320081 hCG_1642624A0A1W2PR95 340 aa19.06■□□□□ 0.64
CLIP4-201ENST00000320081 A0A087WWV3 80 aa19.06■□□□□ 0.64
CLIP4-201ENST00000320081 UBA5Q9GZZ9 404 aa19.06■□□□□ 0.64
CLIP4-201ENST00000320081 PDCL3Q9H2J4 239 aa19.06■□□□□ 0.64
CLIP4-201ENST00000320081 SEPT11Q9NVA2 429 aaKnown RBP19.06■□□□□ 0.64
CLIP4-201ENST00000320081 DACH1Q9UI36 760 aa19.06■□□□□ 0.64
CLIP4-201ENST00000320081 NIP7Q9Y221 180 aaKnown RBP eCLIP19.06■□□□□ 0.64
CLIP4-201ENST00000320081 ZFYVE9O95405 1425 aa19.06■□□□□ 0.64
CLIP4-201ENST00000320081 PLIN2Q99541 437 aa19.05■□□□□ 0.64
CLIP4-201ENST00000320081 WASF1Q92558 559 aa19.05■□□□□ 0.64
CLIP4-201ENST00000320081 EDC4Q6P2E9 1401 aaKnown RBP19.05■□□□□ 0.64
CLIP4-201ENST00000320081 TTC41PQ6P2S7 1318 aa19.05■□□□□ 0.64
CLIP4-201ENST00000320081 TAF3Q5VWG9 929 aa19.05■□□□□ 0.64
CLIP4-201ENST00000320081 GPIHBP1Q8IV16 184 aa19.05■□□□□ 0.64
CLIP4-201ENST00000320081 TAF5LO75529 589 aa19.05■□□□□ 0.64
CLIP4-201ENST00000320081 CCDC102BQ68D86 513 aa19.05■□□□□ 0.64
CLIP4-201ENST00000320081 PBRM1Q86U86 1689 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 A0A0D9SFI3 127 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 ATP6V1AP38606 617 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 ADCK5Q3MIX3 580 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 KIAA1328Q86T90 577 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 MRPS27Q92552 414 aaKnown RBP19.04■□□□□ 0.64
CLIP4-201ENST00000320081 B4E1Z4 1266 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 ZNF444Q8N0Y2 327 aaPredicted RBP19.04■□□□□ 0.64
CLIP4-201ENST00000320081 TBX22Q9Y458 520 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 GCC2Q8IWJ2 1684 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 CCDC196A0A1B0GTZ2 297 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 WTAPQ15007 396 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 DHX32Q7L7V1 743 aaKnown RBP19.04■□□□□ 0.64
CLIP4-201ENST00000320081 NPHP3Q7Z494 1330 aa19.04■□□□□ 0.64
CLIP4-201ENST00000320081 CCDC194A0A1B0GVG4 234 aa19.03■□□□□ 0.64
CLIP4-201ENST00000320081 UBASH3AP57075 661 aa19.03■□□□□ 0.64
CLIP4-201ENST00000320081 GNG11P61952 73 aa19.03■□□□□ 0.64
CLIP4-201ENST00000320081 TNNI3KQ59H18 835 aa19.03■□□□□ 0.64
CLIP4-201ENST00000320081 NUP88Q99567 741 aaPredicted RBP19.03■□□□□ 0.64
CLIP4-201ENST00000320081 DNAI1Q9UI46 699 aa19.03■□□□□ 0.64
CLIP4-201ENST00000320081 FPGT-TNNI3KV9GXZ4 949 aa19.03■□□□□ 0.64
CLIP4-201ENST00000320081 IRS4O14654 1257 aaPredicted RBP19.03■□□□□ 0.64
CLIP4-201ENST00000320081 ME3Q16798 604 aa19.03■□□□□ 0.64
CLIP4-201ENST00000320081 CATIPQ7Z7H3 387 aa19.03■□□□□ 0.64
CLIP4-201ENST00000320081 MAGEB6Q8N7X4 407 aa19.03■□□□□ 0.64
CLIP4-201ENST00000320081 INTS4Q96HW7 963 aaKnown RBP19.03■□□□□ 0.64
CLIP4-201ENST00000320081 TLR7Q9NYK1 1049 aaKnown RBP19.03■□□□□ 0.64
CLIP4-201ENST00000320081 RAD50Q92878 1312 aa19.02■□□□□ 0.64
CLIP4-201ENST00000320081 PRR36Q9H6K5 1346 aa19.02■□□□□ 0.64
CLIP4-201ENST00000320081 SPTLC2O15270 562 aa19.02■□□□□ 0.64
CLIP4-201ENST00000320081 ZSCAN16Q9H4T2 348 aaPredicted RBP19.02■□□□□ 0.64
CLIP4-201ENST00000320081 SNW1Q13573 536 aaKnown RBP19.02■□□□□ 0.64
CLIP4-201ENST00000320081 CCDC181Q5TID7 509 aa19.02■□□□□ 0.64
CLIP4-201ENST00000320081 C19orf44Q9H6X5 657 aa19.02■□□□□ 0.64
CLIP4-201ENST00000320081 DZIP3Q86Y13 1208 aaKnown RBP19.02■□□□□ 0.63
CLIP4-201ENST00000320081 ZNF652Q9Y2D9 606 aa19.02■□□□□ 0.63
CLIP4-201ENST00000320081 CEP135Q66GS9 1140 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 PHKBQ93100 1093 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 DHX58Q96C10 678 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 CTAGE5O15320 804 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 LIG1P18858 919 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 GCKRQ14397 625 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 CCDC96Q2M329 555 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 BCORL1Q5H9F3 1711 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 RNF113AO15541 343 aaKnown RBP19.01■□□□□ 0.63
CLIP4-201ENST00000320081 GPT2Q8TD30 523 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 UIMC1Q96RL1 719 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 IFNKQ9P0W0 207 aa19.01■□□□□ 0.63
CLIP4-201ENST00000320081 SBNO1A3KN83 1393 aa19■□□□□ 0.63
CLIP4-201ENST00000320081 TMCO3Q6UWJ1 677 aa19■□□□□ 0.63
CLIP4-201ENST00000320081 TTLL7Q6ZT98 887 aa19■□□□□ 0.63
CLIP4-201ENST00000320081 DNAJC10Q8IXB1 793 aa19■□□□□ 0.63
CLIP4-201ENST00000320081 TARBP1Q13395 1621 aaKnown RBP19■□□□□ 0.63
CLIP4-201ENST00000320081 CCP110O43303 1012 aa19■□□□□ 0.63
CLIP4-201ENST00000320081 DCAF5Q96JK2 942 aa19■□□□□ 0.63
CLIP4-201ENST00000320081 MATR3P43243 847 aaKnown RBP eCLIP19■□□□□ 0.63
CLIP4-201ENST00000320081 GIGYF1O75420 1035 aaPredicted RBP19■□□□□ 0.63
CLIP4-201ENST00000320081 SPTY2D1Q68D10 685 aaPredicted RBP19■□□□□ 0.63
CLIP4-201ENST00000320081 ANTXR1Q9H6X2 564 aa19■□□□□ 0.63
CLIP4-201ENST00000320081 IL2RBP14784 551 aa18.99■□□□□ 0.63
CLIP4-201ENST00000320081 ERCC3P19447 782 aa18.99■□□□□ 0.63
CLIP4-201ENST00000320081 AK7Q96M32 723 aa18.99■□□□□ 0.63
CLIP4-201ENST00000320081 RPS6KB1P23443 525 aa18.99■□□□□ 0.63
CLIP4-201ENST00000320081 HSPA4P34932 840 aa18.99■□□□□ 0.63
CLIP4-201ENST00000320081 UBA7P41226 1012 aa18.99■□□□□ 0.63
CLIP4-201ENST00000320081 RTN1Q16799 776 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms