RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 MAP7D2Q96T17 732 aa24.59■■□□□ 1.53
CPNE7-202ENST00000319518 ANKRD1Q15327 319 aa24.59■■□□□ 1.53
CPNE7-202ENST00000319518 USPL1Q5W0Q7 1092 aa24.59■■□□□ 1.53
CPNE7-202ENST00000319518 TSC1Q92574 1164 aa24.59■■□□□ 1.53
CPNE7-202ENST00000319518 TFIP11Q9UBB9 837 aaKnown RBP24.59■■□□□ 1.53
CPNE7-202ENST00000319518 PYCARDQ9ULZ3 195 aa24.59■■□□□ 1.53
CPNE7-202ENST00000319518 UBR2Q8IWV8 1755 aa24.58■■□□□ 1.53
CPNE7-202ENST00000319518 PDCP20941 246 aa24.58■■□□□ 1.53
CPNE7-202ENST00000319518 TOGARAM1Q9Y4F4 1720 aa24.58■■□□□ 1.52
CPNE7-202ENST00000319518 RFX5P48382 616 aaPredicted RBP24.57■■□□□ 1.52
CPNE7-202ENST00000319518 NUP62CLQ9H1M0 184 aa24.57■■□□□ 1.52
CPNE7-202ENST00000319518 MAP3K11Q16584 847 aa24.57■■□□□ 1.52
CPNE7-202ENST00000319518 ASAP1Q9ULH1 1129 aa24.57■■□□□ 1.52
CPNE7-202ENST00000319518 ZNF330Q9Y3S2 320 aaPredicted RBP24.57■■□□□ 1.52
CPNE7-202ENST00000319518 JAK2O60674 1132 aa24.56■■□□□ 1.52
CPNE7-202ENST00000319518 CASP7P55210 303 aa24.56■■□□□ 1.52
CPNE7-202ENST00000319518 TYRO3Q06418 890 aa24.56■■□□□ 1.52
CPNE7-202ENST00000319518 SPC24Q8NBT2 197 aa24.56■■□□□ 1.52
CPNE7-202ENST00000319518 KIAA1524Q8TCG1 905 aa24.56■■□□□ 1.52
CPNE7-202ENST00000319518 FAM200AQ8TCP9 573 aa24.56■■□□□ 1.52
CPNE7-202ENST00000319518 DACT1Q9NYF0 836 aa24.56■■□□□ 1.52
CPNE7-202ENST00000319518 TMOD3Q9NYL9 352 aa24.56■■□□□ 1.52
CPNE7-202ENST00000319518 HMG20BQ9P0W2 317 aa24.56■■□□□ 1.52
CPNE7-202ENST00000319518 PDIA4P13667 645 aaKnown RBP24.55■■□□□ 1.52
CPNE7-202ENST00000319518 PTPN12Q05209 780 aaKnown RBP24.55■■□□□ 1.52
CPNE7-202ENST00000319518 CKAP2LQ8IYA6 745 aa24.55■■□□□ 1.52
CPNE7-202ENST00000319518 LEO1Q8WVC0 666 aaPredicted RBP24.55■■□□□ 1.52
CPNE7-202ENST00000319518 PRIMPOLQ96LW4 560 aa24.55■■□□□ 1.52
CPNE7-202ENST00000319518 COPRSQ9NQ92 184 aa24.55■■□□□ 1.52
CPNE7-202ENST00000319518 ATP5JP18859 108 aa24.55■■□□□ 1.52
CPNE7-202ENST00000319518 LUZP1Q86V48 1076 aa24.55■■□□□ 1.52
CPNE7-202ENST00000319518 SEC62Q99442 399 aaKnown RBP24.55■■□□□ 1.52
CPNE7-202ENST00000319518 TFCP2Q12800 502 aa24.54■■□□□ 1.52
CPNE7-202ENST00000319518 CCDC129Q6ZRS4 1044 aa24.54■■□□□ 1.52
CPNE7-202ENST00000319518 PIGBQ92521 554 aa24.54■■□□□ 1.52
CPNE7-202ENST00000319518 ZNF609O15014 1411 aa24.54■■□□□ 1.52
CPNE7-202ENST00000319518 PAPPAQ13219 1627 aa24.54■■□□□ 1.52
CPNE7-202ENST00000319518 TNNI3KQ59H18 835 aa24.54■■□□□ 1.52
CPNE7-202ENST00000319518 PGBD1Q96JS3 809 aa24.54■■□□□ 1.52
CPNE7-202ENST00000319518 SPATA32Q96LK8 384 aa24.54■■□□□ 1.52
CPNE7-202ENST00000319518 FPGT-TNNI3KV9GXZ4 949 aa24.54■■□□□ 1.52
CPNE7-202ENST00000319518 GTF2F1P35269 517 aaKnown RBP eCLIP24.53■■□□□ 1.524e-7■■■■□ 22.1
CPNE7-202ENST00000319518 LMBR1LQ6UX01 489 aa24.53■■□□□ 1.52
CPNE7-202ENST00000319518 GTF3C6Q969F1 213 aa24.53■■□□□ 1.52
CPNE7-202ENST00000319518 SCAND2PQ9GZW5 306 aaPredicted RBP24.53■■□□□ 1.52
CPNE7-202ENST00000319518 TNS2Q63HR2 1409 aa24.53■■□□□ 1.52
CPNE7-202ENST00000319518 HMGN5P82970 282 aaKnown RBP24.53■■□□□ 1.52
CPNE7-202ENST00000319518 RABL6Q3YEC7 729 aaPredicted RBP24.53■■□□□ 1.52
CPNE7-202ENST00000319518 RBM43Q6ZSC3 357 aaKnown RBP24.53■■□□□ 1.52
CPNE7-202ENST00000319518 ZNF710Q8N1W2 664 aa24.53■■□□□ 1.52
CPNE7-202ENST00000319518 NR1I2O75469 434 aa24.51■■□□□ 1.51
CPNE7-202ENST00000319518 TNMDQ9H2S6 317 aa24.51■■□□□ 1.51
CPNE7-202ENST00000319518 CBX8Q9HC52 389 aa24.51■■□□□ 1.51
CPNE7-202ENST00000319518 CYP21A2P08686 494 aa24.51■■□□□ 1.51
CPNE7-202ENST00000319518 FOXO4P98177 505 aa24.51■■□□□ 1.51
CPNE7-202ENST00000319518 ANO6Q4KMQ2 910 aa24.51■■□□□ 1.51
CPNE7-202ENST00000319518 DNAJC10Q8IXB1 793 aa24.51■■□□□ 1.51
CPNE7-202ENST00000319518 NEK1Q96PY6 1258 aa24.51■■□□□ 1.51
CPNE7-202ENST00000319518 ARID3AQ99856 593 aa24.51■■□□□ 1.51
CPNE7-202ENST00000319518 KAT6BQ8WYB5 2073 aa24.5■■□□□ 1.51
CPNE7-202ENST00000319518 RESTQ13127 1097 aa24.5■■□□□ 1.51
CPNE7-202ENST00000319518 DDX11Q96FC9 970 aa24.5■■□□□ 1.51
CPNE7-202ENST00000319518 DBNDD2Q9BQY9 259 aa24.5■■□□□ 1.51
CPNE7-202ENST00000319518 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
CPNE7-202ENST00000319518 H7C1W4 665 aa24.5■■□□□ 1.51
CPNE7-202ENST00000319518 Q6ZUG5 572 aa24.5■■□□□ 1.51
CPNE7-202ENST00000319518 BRF1Q92994 677 aa24.5■■□□□ 1.51
CPNE7-202ENST00000319518 CLSTN2Q9H4D0 955 aa24.5■■□□□ 1.51
CPNE7-202ENST00000319518 CWC25Q9NXE8 425 aaPredicted RBP24.5■■□□□ 1.51
CPNE7-202ENST00000319518 CCDC9Q9Y3X0 531 aaKnown RBP24.5■■□□□ 1.51
CPNE7-202ENST00000319518 MTERF4Q7Z6M4 381 aaKnown RBP24.49■■□□□ 1.51
CPNE7-202ENST00000319518 ATG3Q9NT62 314 aa24.49■■□□□ 1.51
CPNE7-202ENST00000319518 NUP188Q5SRE5 1749 aa24.49■■□□□ 1.51
CPNE7-202ENST00000319518 FAM177BA6PVY3 158 aa24.49■■□□□ 1.51
CPNE7-202ENST00000319518 PTGS1P23219 599 aa24.49■■□□□ 1.51
CPNE7-202ENST00000319518 KRT32Q14532 448 aa24.49■■□□□ 1.51
CPNE7-202ENST00000319518 DNAJC2Q99543 621 aaKnown RBP24.49■■□□□ 1.51
CPNE7-202ENST00000319518 DDX19AQ9NUU7 478 aaKnown RBP24.49■■□□□ 1.51
CPNE7-202ENST00000319518 STOX1Q6ZVD7 989 aa24.48■■□□□ 1.51
CPNE7-202ENST00000319518 LRRC2Q9BYS8 371 aa24.48■■□□□ 1.51
CPNE7-202ENST00000319518 GOLGA6L4A6NEF3 574 aa24.46■■□□□ 1.51
CPNE7-202ENST00000319518 SCRN1Q12765 414 aa24.46■■□□□ 1.51
CPNE7-202ENST00000319518 SLFNL1Q499Z3 407 aa24.46■■□□□ 1.51
CPNE7-202ENST00000319518 DDX46Q7L014 1031 aaKnown RBP24.46■■□□□ 1.51
CPNE7-202ENST00000319518 HAUS7Q99871 368 aa24.46■■□□□ 1.51
CPNE7-202ENST00000319518 RFX7Q2KHR2 1363 aa24.45■■□□□ 1.51
CPNE7-202ENST00000319518 TPM3P06753 285 aa24.45■■□□□ 1.51
CPNE7-202ENST00000319518 SYTL4Q96C24 671 aaPredicted RBP24.45■■□□□ 1.51
CPNE7-202ENST00000319518 ADAMTS2O95450 1211 aa24.45■■□□□ 1.5
CPNE7-202ENST00000319518 MCMDC2Q4G0Z9 681 aa24.45■■□□□ 1.5
CPNE7-202ENST00000319518 ZNF594Q96JF6 807 aaPredicted RBP24.45■■□□□ 1.5
CPNE7-202ENST00000319518 U3KPZ7 1027 aaPredicted RBP24.45■■□□□ 1.5
CPNE7-202ENST00000319518 TJP1Q07157 1748 aa24.45■■□□□ 1.5
CPNE7-202ENST00000319518 NRBP1Q9UHY1 535 aa24.44■■□□□ 1.5
CPNE7-202ENST00000319518 GOLGA6L6A8MZA4 724 aa24.43■■□□□ 1.5
CPNE7-202ENST00000319518 ADD1P35611 737 aaKnown RBP24.43■■□□□ 1.5
CPNE7-202ENST00000319518 PLA2G4DQ86XP0 818 aa24.43■■□□□ 1.5
CPNE7-202ENST00000319518 TDRD7Q8NHU6 1098 aaKnown RBP24.43■■□□□ 1.5
CPNE7-202ENST00000319518 SMARCC2Q8TAQ2 1214 aa24.43■■□□□ 1.5
CPNE7-202ENST00000319518 BICD2Q8TD16 824 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms