RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 NDUFB9Q9Y6M9 179 aa18.91■□□□□ 0.62
CRAT-201ENST00000318080 BTBD11A6QL63 1104 aa18.91■□□□□ 0.62
CRAT-201ENST00000318080 SMTNL1A8MU46 457 aa18.91■□□□□ 0.62
CRAT-201ENST00000318080 CACNA1FO60840 1977 aa18.91■□□□□ 0.62
CRAT-201ENST00000318080 MTX1Q13505 466 aa18.9■□□□□ 0.62
CRAT-201ENST00000318080 LEO1Q8WVC0 666 aaPredicted RBP18.9■□□□□ 0.62
CRAT-201ENST00000318080 SUCLG2Q96I99 432 aa18.9■□□□□ 0.62
CRAT-201ENST00000318080 SPATA32Q96LK8 384 aa18.9■□□□□ 0.62
CRAT-201ENST00000318080 N4BP2Q86UW6 1770 aaPredicted RBP18.9■□□□□ 0.62
CRAT-201ENST00000318080 AHDC1Q5TGY3 1603 aaPredicted RBP18.9■□□□□ 0.62
CRAT-201ENST00000318080 PHLPP1O60346 1717 aa18.9■□□□□ 0.62
CRAT-201ENST00000318080 ELF2Q15723 593 aa18.89■□□□□ 0.62
CRAT-201ENST00000318080 CHMP4AQ9BY43 222 aa18.89■□□□□ 0.62
CRAT-201ENST00000318080 TERF2Q15554 542 aa18.89■□□□□ 0.61
CRAT-201ENST00000318080 BLOC1S2Q6QNY1 142 aa18.89■□□□□ 0.61
CRAT-201ENST00000318080 CERKQ8TCT0 537 aa18.89■□□□□ 0.61
CRAT-201ENST00000318080 ZNF75DP51815 510 aa18.88■□□□□ 0.61
CRAT-201ENST00000318080 AIMP1Q12904 312 aaKnown RBP18.88■□□□□ 0.61
CRAT-201ENST00000318080 ZNF530Q6P9A1 599 aaPredicted RBP18.88■□□□□ 0.61
CRAT-201ENST00000318080 BICC1Q9H694 974 aaKnown RBP18.88■□□□□ 0.61
CRAT-201ENST00000318080 BTG4Q9NY30 223 aa18.88■□□□□ 0.61
CRAT-201ENST00000318080 CLIP2Q9UDT6 1046 aa18.88■□□□□ 0.61
CRAT-201ENST00000318080 COL16A1Q07092 1604 aaPredicted RBP18.88■□□□□ 0.61
CRAT-201ENST00000318080 GOLGA6L4A6NEF3 574 aa18.88■□□□□ 0.61
CRAT-201ENST00000318080 CEBPZQ03701 1054 aaKnown RBP18.88■□□□□ 0.61
CRAT-201ENST00000318080 FSD1Q9BTV5 496 aa18.88■□□□□ 0.61
CRAT-201ENST00000318080 MEGF6O75095 1541 aa18.88■□□□□ 0.61
CRAT-201ENST00000318080 CEP135Q66GS9 1140 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 FBXO38Q6PIJ6 1188 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 TOM1L2Q6ZVM7 507 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 LRRN4CLQ8ND94 238 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 PPFIA3O75145 1194 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 RPS6KB1P23443 525 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 FOSBP53539 338 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 TEFQ10587 303 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 ZBTB9Q96C00 473 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 GPATCH3Q96I76 525 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 ELP1O95163 1332 aa18.87■□□□□ 0.61
CRAT-201ENST00000318080 ERCC4Q92889 916 aaPredicted RBP18.87■□□□□ 0.61
CRAT-201ENST00000318080 TPM3P06753 285 aa18.86■□□□□ 0.61
CRAT-201ENST00000318080 PLA2G4DQ86XP0 818 aa18.86■□□□□ 0.61
CRAT-201ENST00000318080 LRRC2Q9BYS8 371 aa18.86■□□□□ 0.61
CRAT-201ENST00000318080 FTOQ9C0B1 505 aaKnown RBP eCLIP18.86■□□□□ 0.61
CRAT-201ENST00000318080 CLSTN2Q9H4D0 955 aa18.86■□□□□ 0.61
CRAT-201ENST00000318080 COL5A2P05997 1499 aaPredicted RBP18.86■□□□□ 0.61
CRAT-201ENST00000318080 ZNF165P49910 485 aa18.86■□□□□ 0.61
CRAT-201ENST00000318080 BICD2Q8TD16 824 aa18.86■□□□□ 0.61
CRAT-201ENST00000318080 MORC2Q9Y6X9 1032 aaPredicted RBP18.86■□□□□ 0.61
CRAT-201ENST00000318080 FILIP1Q7Z7B0 1213 aa18.85■□□□□ 0.61
CRAT-201ENST00000318080 GTF3C6Q969F1 213 aa18.85■□□□□ 0.61
CRAT-201ENST00000318080 DBF4Q9UBU7 674 aaPredicted RBP18.85■□□□□ 0.61
CRAT-201ENST00000318080 USP16Q9Y5T5 823 aa18.85■□□□□ 0.61
CRAT-201ENST00000318080 COL15A1P39059 1388 aa18.85■□□□□ 0.61
CRAT-201ENST00000318080 LMO7Q8WWI1 1683 aa18.85■□□□□ 0.61
CRAT-201ENST00000318080 CDK11BP21127 795 aaKnown RBP18.85■□□□□ 0.61
CRAT-201ENST00000318080 PSMA5P28066 241 aa18.85■□□□□ 0.61
CRAT-201ENST00000318080 RBM6P78332 1123 aaKnown RBP18.85■□□□□ 0.61
CRAT-201ENST00000318080 NCAPD2Q15021 1401 aa18.84■□□□□ 0.61
CRAT-201ENST00000318080 EVA1CP58658 441 aa18.84■□□□□ 0.61
CRAT-201ENST00000318080 KSR2Q6VAB6 950 aa18.84■□□□□ 0.61
CRAT-201ENST00000318080 CCDC129Q6ZRS4 1044 aa18.84■□□□□ 0.61
CRAT-201ENST00000318080 SCAND2PQ9GZW5 306 aaPredicted RBP18.84■□□□□ 0.61
CRAT-201ENST00000318080 GABPB1Q06547 395 aaPredicted RBP18.84■□□□□ 0.61
CRAT-201ENST00000318080 G3BP1Q13283 466 aaKnown RBP eCLIP18.84■□□□□ 0.617e-7■■□□□ 14
CRAT-201ENST00000318080 RAPGEF4Q8WZA2 1011 aa18.84■□□□□ 0.61
CRAT-201ENST00000318080 BRF1Q92994 677 aa18.84■□□□□ 0.61
CRAT-201ENST00000318080 WDR17Q8IZU2 1322 aa18.83■□□□□ 0.61
CRAT-201ENST00000318080 PDCP20941 246 aa18.83■□□□□ 0.61
CRAT-201ENST00000318080 SEC62Q99442 399 aaKnown RBP18.83■□□□□ 0.61
CRAT-201ENST00000318080 GIGYF1O75420 1035 aaPredicted RBP18.83■□□□□ 0.6
CRAT-201ENST00000318080 RBM43Q6ZSC3 357 aaKnown RBP18.83■□□□□ 0.6
CRAT-201ENST00000318080 C11orf57Q6ZUT1 292 aaPredicted RBP18.83■□□□□ 0.6
CRAT-201ENST00000318080 KRT222Q8N1A0 295 aa18.83■□□□□ 0.6
CRAT-201ENST00000318080 ZNF446Q9NWS9 450 aa18.83■□□□□ 0.6
CRAT-201ENST00000318080 GRM8O00222 908 aa18.82■□□□□ 0.6
CRAT-201ENST00000318080 HOXB7P09629 217 aa18.82■□□□□ 0.6
CRAT-201ENST00000318080 EPHA10Q5JZY3 1008 aa18.82■□□□□ 0.6
CRAT-201ENST00000318080 ERC1Q8IUD2 1116 aa18.82■□□□□ 0.6
CRAT-201ENST00000318080 TDRD7Q8NHU6 1098 aaKnown RBP18.82■□□□□ 0.6
CRAT-201ENST00000318080 TAF5LO75529 589 aa18.82■□□□□ 0.6
CRAT-201ENST00000318080 PLEKHO1Q53GL0 409 aaPredicted RBP18.82■□□□□ 0.6
CRAT-201ENST00000318080 DDX19AQ9NUU7 478 aaKnown RBP18.82■□□□□ 0.6
CRAT-201ENST00000318080 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
CRAT-201ENST00000318080 RESTQ13127 1097 aa18.81■□□□□ 0.6
CRAT-201ENST00000318080 SLFNL1Q499Z3 407 aa18.81■□□□□ 0.6
CRAT-201ENST00000318080 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
CRAT-201ENST00000318080 CAPN2P17655 700 aa18.81■□□□□ 0.6
CRAT-201ENST00000318080 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
CRAT-201ENST00000318080 IGKV5-2P06315 115 aa18.8■□□□□ 0.6
CRAT-201ENST00000318080 SNRKQ9NRH2 765 aa18.8■□□□□ 0.6
CRAT-201ENST00000318080 RNMTO43148 476 aaKnown RBP18.8■□□□□ 0.6
CRAT-201ENST00000318080 TATP17735 454 aaPredicted RBP18.8■□□□□ 0.6
CRAT-201ENST00000318080 RNF20Q5VTR2 975 aa18.8■□□□□ 0.6
CRAT-201ENST00000318080 Q6ZUG5 572 aa18.8■□□□□ 0.6
CRAT-201ENST00000318080 SKILP12757 684 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 ANKRD1Q15327 319 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 CERS3Q8IU89 383 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 CYP27B1O15528 508 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 BRD2P25440 801 aaKnown RBP18.79■□□□□ 0.6
CRAT-201ENST00000318080 IQCB1Q15051 598 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms