RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 SPNS2Q8IVW8 549 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 FBXO22Q8NEZ5 403 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 MAP4K1Q92918 833 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 MARVELD3Q96A59 401 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 CALR3Q96L12 384 aaKnown RBP7.33□□□□□ -1.24
SPATA9-202ENST00000316087 LLPHQ9BRT6 129 aaKnown RBP7.33□□□□□ -1.24
SPATA9-202ENST00000316087 NAT10Q9H0A0 1025 aaKnown RBP7.33□□□□□ -1.24
SPATA9-202ENST00000316087 C9orf78Q9NZ63 289 aaPredicted RBP7.33□□□□□ -1.24
SPATA9-202ENST00000316087 CGNQ9P2M7 1197 aaKnown RBP7.33□□□□□ -1.24
SPATA9-202ENST00000316087 NWD1Q149M9 1564 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 VPS37CA5D8V6 355 aaPredicted RBP7.33□□□□□ -1.24
SPATA9-202ENST00000316087 GOLGA6L19H0YKK7 550 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 DMTNQ08495 405 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 G3BP1Q13283 466 aaKnown RBP eCLIP7.33□□□□□ -1.24
SPATA9-202ENST00000316087 PLEKHO1Q53GL0 409 aaPredicted RBP7.33□□□□□ -1.24
SPATA9-202ENST00000316087 GIGYF2Q6Y7W6 1299 aaKnown RBP7.33□□□□□ -1.24
SPATA9-202ENST00000316087 IL17REQ8NFR9 667 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 SPATA32Q96LK8 384 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 CRISPLD2Q9H0B8 497 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 IL1RAPL2Q9NP60 686 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 MIS18AQ9NYP9 233 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 PCDHB8Q9UN66 801 aa7.33□□□□□ -1.24
SPATA9-202ENST00000316087 UTYO14607 1347 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 JCADQ9P266 1359 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 CCP110O43303 1012 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 FOXO3O43524 673 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 GSDMDP57764 484 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 EIF4A1P60842 406 aaKnown RBP7.32□□□□□ -1.24
SPATA9-202ENST00000316087 DNM1Q05193 864 aaKnown RBP7.32□□□□□ -1.24
SPATA9-202ENST00000316087 TYRO3Q06418 890 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 SARM1Q6SZW1 724 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 KSR2Q6VAB6 950 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 UNC5CLQ8IV45 518 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 CCDC83Q8IWF9 413 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 DRC7Q8IY82 874 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 THEMISQ8N1K5 641 aaPredicted RBP7.32□□□□□ -1.24
SPATA9-202ENST00000316087 LINS1Q8NG48 757 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 TDRD7Q8NHU6 1098 aaKnown RBP7.32□□□□□ -1.24
SPATA9-202ENST00000316087 OXER1Q8TDS5 423 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 IP6K1Q92551 441 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 MRFAP1L1Q96HT8 127 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 CLSTN2Q9H4D0 955 aa7.32□□□□□ -1.24
SPATA9-202ENST00000316087 MRC1P22897 1456 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 COL15A1P39059 1388 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 SPDYE5A6NIY4 337 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 RPS6KB1P23443 525 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 TPM4P67936 248 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 NEXNQ0ZGT2 675 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 LRRFIP1Q32MZ4 808 aaKnown RBP7.31□□□□□ -1.24
SPATA9-202ENST00000316087 C1orf141Q5JVX7 400 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 TSHZ3Q63HK5 1081 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 CREB3L3Q68CJ9 461 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 PRPF40BQ6NWY9 871 aaKnown RBP7.31□□□□□ -1.24
SPATA9-202ENST00000316087 GIMAP6Q6P9H5 292 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 C3orf67Q6ZVT6 689 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 ZNF467Q7Z7K2 595 aaPredicted RBP7.31□□□□□ -1.24
SPATA9-202ENST00000316087 PROCA1Q8NCQ7 364 aaPredicted RBP7.31□□□□□ -1.24
SPATA9-202ENST00000316087 ANKRD7Q92527 254 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 ZNF396Q96N95 335 aaPredicted RBP7.31□□□□□ -1.24
SPATA9-202ENST00000316087 TTC12Q9H892 705 aaPredicted RBP7.31□□□□□ -1.24
SPATA9-202ENST00000316087 GDPD2Q9HCC8 539 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 KCND1Q9NSA2 647 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 OGFRQ9NZT2 677 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 USTQ9Y2C2 406 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 RBM8AQ9Y5S9 174 aaKnown RBP7.31□□□□□ -1.24
SPATA9-202ENST00000316087 LTN1O94822 1766 aa7.31□□□□□ -1.24
SPATA9-202ENST00000316087 TCHHQ07283 1943 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 RBM47A0AV96 593 aaKnown RBP7.3□□□□□ -1.24
SPATA9-202ENST00000316087 PI4KAP2A4QPH2 592 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 BTBD11A6QL63 1104 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 GABPB1Q06547 395 aaPredicted RBP7.3□□□□□ -1.24
SPATA9-202ENST00000316087 USPL1Q5W0Q7 1092 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 NAA16Q6N069 864 aaPredicted RBP7.3□□□□□ -1.24
SPATA9-202ENST00000316087 PLA2G4DQ86XP0 818 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 PI4KAP1Q8N8J0 262 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 CCDC112Q8NEF3 446 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 TRIM5Q9C035 493 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 KIAA1522Q9P206 1035 aaPredicted RBP7.3□□□□□ -1.24
SPATA9-202ENST00000316087 IMPACTQ9P2X3 320 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 SPG7Q9UQ90 795 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 MARF1Q9Y4F3 1742 aaKnown RBP7.3□□□□□ -1.24
SPATA9-202ENST00000316087 MED23Q9ULK4 1368 aa7.3□□□□□ -1.24
SPATA9-202ENST00000316087 H3BQV1 296 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 SLC27A2O14975 620 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 MYO1BO43795 1136 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 NBPF7P0C2Y1 421 aaPredicted RBP7.29□□□□□ -1.24
SPATA9-202ENST00000316087 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 KCNJ6P48051 423 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 ZNF165P49910 485 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 SKIV2LQ15477 1246 aaKnown RBP7.29□□□□□ -1.24
SPATA9-202ENST00000316087 ZRSR1Q15695 479 aaKnown RBP7.29□□□□□ -1.24
SPATA9-202ENST00000316087 STX1AQ16623 288 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 ME3Q16798 604 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 IFFO2Q5TF58 517 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 LARP1Q6PKG0 1096 aaKnown RBP7.29□□□□□ -1.24
SPATA9-202ENST00000316087 CCDC73Q6ZRK6 1079 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 AACSQ86V21 672 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 ABTB2Q8N961 1025 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 PBXIP1Q96AQ6 731 aa7.29□□□□□ -1.24
SPATA9-202ENST00000316087 FSD1Q9BTV5 496 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms