RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 EDC4Q6P2E9 1401 aaKnown RBP10.47□□□□□ -0.73
CTC1-201ENST00000315684 CCDC196A0A1B0GTZ2 297 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 FLAD1Q8NFF5 587 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 FILIP1LQ4L180 1135 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 SPC24Q8NBT2 197 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 DEF6Q9H4E7 631 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 ARMT1Q9H993 441 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 TTF2Q9UNY4 1162 aaKnown RBP10.47□□□□□ -0.73
CTC1-201ENST00000315684 TMEM266Q2M3C6 531 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 LINS1Q8NG48 757 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 DDX21Q9NR30 783 aaKnown RBP eCLIP10.47□□□□□ -0.73
CTC1-201ENST00000315684 KDM5DQ9BY66 1539 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 GOLGA6L1Q8N7Z2 621 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 NCOA7Q8NI08 942 aa10.47□□□□□ -0.73
CTC1-201ENST00000315684 RBM6P78332 1123 aaKnown RBP10.46□□□□□ -0.73
CTC1-201ENST00000315684 MAPKAPK5Q8IW41 473 aa10.46□□□□□ -0.73
CTC1-201ENST00000315684 HECW2Q9P2P5 1572 aa10.46□□□□□ -0.73
CTC1-201ENST00000315684 PATL2C9JE40 543 aaKnown RBP10.46□□□□□ -0.73
CTC1-201ENST00000315684 SERPINB2P05120 415 aa10.46□□□□□ -0.73
CTC1-201ENST00000315684 CAGE1Q8TC20 777 aa10.46□□□□□ -0.73
CTC1-201ENST00000315684 GPR101Q96P66 508 aaPredicted RBP10.46□□□□□ -0.73
CTC1-201ENST00000315684 CSADQ9Y600 493 aa10.46□□□□□ -0.73
CTC1-201ENST00000315684 PTPDC1A2A3K4 754 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 MBD4O95243 580 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 NFKBIBQ15653 356 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 CCDC174Q6PII3 467 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 DPH6Q7L8W6 267 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 SYCP3Q8IZU3 236 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 PLEKHG1Q9ULL1 1385 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 TGFBRAP1Q8WUH2 860 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 PUF60Q9UHX1 559 aaKnown RBP10.46□□□□□ -0.74
CTC1-201ENST00000315684 EIF2AK4Q9P2K8 1649 aaKnown RBP10.46□□□□□ -0.74
CTC1-201ENST00000315684 SAMD9LQ8IVG5 1584 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 C21orf2O43822 256 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 NAPAP54920 295 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 SKOR2Q2VWA4 1001 aaPredicted RBP10.46□□□□□ -0.74
CTC1-201ENST00000315684 NOM1Q5C9Z4 860 aaKnown RBP10.46□□□□□ -0.74
CTC1-201ENST00000315684 ISM2Q6H9L7 571 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 CCDC70Q6NSX1 233 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 METTL22Q9BUU2 404 aaPredicted RBP10.46□□□□□ -0.74
CTC1-201ENST00000315684 TRIM5Q9C035 493 aa10.46□□□□□ -0.74
CTC1-201ENST00000315684 DALRD3Q5D0E6 543 aaKnown RBP10.45□□□□□ -0.74
CTC1-201ENST00000315684 IDEP14735 1019 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 FCHSD1Q86WN1 690 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 NLGN1Q8N2Q7 840 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 RALGAPBQ86X10 1494 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 A0A1B0GUL7 405 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 PPEF1O14829 653 aaPredicted RBP10.45□□□□□ -0.74
CTC1-201ENST00000315684 MMP10P09238 476 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 MYCLP12524 364 aaPredicted RBP10.45□□□□□ -0.74
CTC1-201ENST00000315684 TRIM21P19474 475 aaKnown RBP10.45□□□□□ -0.74
CTC1-201ENST00000315684 USH1GQ495M9 461 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 TESK2Q96S53 571 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 TNMDQ9H2S6 317 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 DENND2AQ9ULE3 1009 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 ARAP3Q8WWN8 1544 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 ERVV-2B6SEH9 535 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 ALDH1L1O75891 902 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 KIF20AO95235 890 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 IARSP41252 1262 aaKnown RBP10.45□□□□□ -0.74
CTC1-201ENST00000315684 MCM2P49736 904 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 IRX3P78415 501 aaPredicted RBP10.45□□□□□ -0.74
CTC1-201ENST00000315684 TBC1D9Q6ZT07 1266 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 GPHNQ9NQX3 736 aaPredicted RBP10.45□□□□□ -0.74
CTC1-201ENST00000315684 KLF18A0A0U1RQI7 1052 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 PRDM1O75626 825 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 CCDC129Q6ZRS4 1044 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 ESR2Q92731 530 aa10.45□□□□□ -0.74
CTC1-201ENST00000315684 GYG1P46976 350 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 ERFEQ4G0M1 354 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 GLIPR1L2Q4G1C9 344 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 USP40Q9NVE5 1235 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 CEP131Q9UPN4 1083 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 PRAMEF22A3QJZ6 481 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 MAGI3Q5TCQ9 1506 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 K7ELQ4 463 aaPredicted RBP10.44□□□□□ -0.74
CTC1-201ENST00000315684 BACH1O14867 736 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 KRT85P78386 507 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 PUM3Q15397 648 aaKnown RBP10.44□□□□□ -0.74
CTC1-201ENST00000315684 NECAB1Q8N987 351 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 GJD4Q96KN9 370 aaPredicted RBP10.44□□□□□ -0.74
CTC1-201ENST00000315684 CARD10Q9BWT7 1032 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 ZBTB1Q9Y2K1 713 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 SHANK2Q9UPX8 1470 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 MFSD14BQ5SR56 506 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 NEK1Q96PY6 1258 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 DDX39AO00148 427 aaKnown RBP10.44□□□□□ -0.74
CTC1-201ENST00000315684 PLCG2P16885 1265 aa10.44□□□□□ -0.74
CTC1-201ENST00000315684 USP8P40818 1118 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 NMIQ13287 307 aaPredicted RBP10.43□□□□□ -0.74
CTC1-201ENST00000315684 FAM177A1Q8N128 213 aaPredicted RBP10.43□□□□□ -0.74
CTC1-201ENST00000315684 XAGE2Q96GT9 111 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.43□□□□□ -0.74
CTC1-201ENST00000315684 MAPKBP1O60336 1514 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 ADGRL3Q9HAR2 1447 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 PZPP20742 1482 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 TCOF1Q13428 1488 aaKnown RBP10.43□□□□□ -0.74
CTC1-201ENST00000315684 RPS8P62241 208 aaKnown RBP10.43□□□□□ -0.74
CTC1-201ENST00000315684 KIF22Q14807 665 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 FAM47CQ5HY64 1035 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms