RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 RPS6KA4O75676 772 aa25.59■■□□□ 1.69
ATG4D-201ENST00000309469 TTC39AQ5SRH9 613 aa25.59■■□□□ 1.69
ATG4D-201ENST00000309469 ZNF589Q86UQ0 364 aaPredicted RBP25.59■■□□□ 1.69
ATG4D-201ENST00000309469 KCNJ4P48050 445 aa25.58■■□□□ 1.69
ATG4D-201ENST00000309469 VGLL2Q8N8G2 317 aa25.58■■□□□ 1.69
ATG4D-201ENST00000309469 RAB3GAP1Q15042 981 aa25.57■■□□□ 1.68
ATG4D-201ENST00000309469 CWC22Q9HCG8 908 aaKnown RBP25.57■■□□□ 1.68
ATG4D-201ENST00000309469 BCORQ6W2J9 1755 aa25.57■■□□□ 1.68
ATG4D-201ENST00000309469 TAF5LO75529 589 aa25.57■■□□□ 1.68
ATG4D-201ENST00000309469 PDE8BO95263 885 aa25.57■■□□□ 1.68
ATG4D-201ENST00000309469 QTRT2Q9H974 415 aaKnown RBP25.57■■□□□ 1.68
ATG4D-201ENST00000309469 CCDC152Q4G0S7 254 aa25.56■■□□□ 1.68
ATG4D-201ENST00000309469 MCMDC2Q4G0Z9 681 aa25.56■■□□□ 1.68
ATG4D-201ENST00000309469 CREB3L3Q68CJ9 461 aa25.56■■□□□ 1.68
ATG4D-201ENST00000309469 CHGBP05060 677 aa25.55■■□□□ 1.68
ATG4D-201ENST00000309469 ZKSCAN1P17029 563 aaPredicted RBP25.55■■□□□ 1.68
ATG4D-201ENST00000309469 MROH5Q6ZUA9 1318 aa25.55■■□□□ 1.68
ATG4D-201ENST00000309469 SMIM5Q71RC9 77 aa25.55■■□□□ 1.68
ATG4D-201ENST00000309469 TTC14Q96N46 770 aa25.55■■□□□ 1.68
ATG4D-201ENST00000309469 TM6SF1Q9BZW5 370 aa25.55■■□□□ 1.68
ATG4D-201ENST00000309469 NARFQ9UHQ1 456 aa25.55■■□□□ 1.68
ATG4D-201ENST00000309469 RTL9Q8NET4 1388 aa25.54■■□□□ 1.68
ATG4D-201ENST00000309469 GNPATO15228 680 aa25.54■■□□□ 1.68
ATG4D-201ENST00000309469 MCM4P33991 863 aa25.54■■□□□ 1.68
ATG4D-201ENST00000309469 CUL4AQ13619 759 aa25.54■■□□□ 1.68
ATG4D-201ENST00000309469 TNPO1Q92973 898 aaKnown RBP25.54■■□□□ 1.68
ATG4D-201ENST00000309469 SEC31BQ9NQW1 1179 aa25.54■■□□□ 1.68
ATG4D-201ENST00000309469 LRP5O75197 1615 aa25.54■■□□□ 1.68
ATG4D-201ENST00000309469 ABCC12Q96J65 1359 aa25.54■■□□□ 1.68
ATG4D-201ENST00000309469 SLC27A2O14975 620 aa25.53■■□□□ 1.68
ATG4D-201ENST00000309469 FKBP4Q02790 459 aaKnown RBP eCLIP25.53■■□□□ 1.68
ATG4D-201ENST00000309469 ZGPATQ8N5A5 531 aaKnown RBP25.53■■□□□ 1.68
ATG4D-201ENST00000309469 SEC62Q99442 399 aaKnown RBP25.53■■□□□ 1.68
ATG4D-201ENST00000309469 BCL2L12Q9HB09 334 aa25.53■■□□□ 1.68
ATG4D-201ENST00000309469 HELLSQ9NRZ9 838 aa25.53■■□□□ 1.68
ATG4D-201ENST00000309469 RNF20Q5VTR2 975 aa25.53■■□□□ 1.68
ATG4D-201ENST00000309469 JAKMIP1Q96N16 626 aaKnown RBP25.53■■□□□ 1.68
ATG4D-201ENST00000309469 CASTP20810 708 aaKnown RBP25.52■■□□□ 1.68
ATG4D-201ENST00000309469 ADCK5Q3MIX3 580 aa25.52■■□□□ 1.68
ATG4D-201ENST00000309469 USPL1Q5W0Q7 1092 aa25.52■■□□□ 1.68
ATG4D-201ENST00000309469 NOL8Q76FK4 1167 aaKnown RBP25.52■■□□□ 1.68
ATG4D-201ENST00000309469 MPHOSPH8Q99549 860 aa25.52■■□□□ 1.68
ATG4D-201ENST00000309469 ZSWIM6Q9HCJ5 1215 aa25.52■■□□□ 1.68
ATG4D-201ENST00000309469 RTCBQ9Y3I0 505 aaKnown RBP25.52■■□□□ 1.68
ATG4D-201ENST00000309469 DDX60Q8IY21 1712 aaKnown RBP25.52■■□□□ 1.68
ATG4D-201ENST00000309469 CCDC129Q6ZRS4 1044 aa25.51■■□□□ 1.67
ATG4D-201ENST00000309469 BCL11BQ9C0K0 894 aaPredicted RBP25.51■■□□□ 1.67
ATG4D-201ENST00000309469 SPEF2Q9C093 1822 aa25.51■■□□□ 1.67
ATG4D-201ENST00000309469 RNF113AO15541 343 aaKnown RBP25.51■■□□□ 1.67
ATG4D-201ENST00000309469 SSFA2P28290 1259 aa25.51■■□□□ 1.67
ATG4D-201ENST00000309469 SCARF1Q14162 830 aa25.51■■□□□ 1.67
ATG4D-201ENST00000309469 ERFEQ4G0M1 354 aa25.51■■□□□ 1.67
ATG4D-201ENST00000309469 ZMYM1Q5SVZ6 1142 aa25.51■■□□□ 1.67
ATG4D-201ENST00000309469 TBC1D9BQ66K14 1250 aa25.51■■□□□ 1.67
ATG4D-201ENST00000309469 ZNF512BQ96KM6 892 aaPredicted RBP25.51■■□□□ 1.67
ATG4D-201ENST00000309469 NUCB2P80303 420 aa25.5■■□□□ 1.67
ATG4D-201ENST00000309469 PUM3Q15397 648 aaKnown RBP25.5■■□□□ 1.67
ATG4D-201ENST00000309469 ZPR1O75312 459 aa25.49■■□□□ 1.67
ATG4D-201ENST00000309469 FGFR2P21802 821 aa25.49■■□□□ 1.67
ATG4D-201ENST00000309469 BICDL1Q6ZP65 573 aa25.49■■□□□ 1.67
ATG4D-201ENST00000309469 HELBQ8NG08 1087 aaPredicted RBP25.49■■□□□ 1.67
ATG4D-201ENST00000309469 LPIN2Q92539 896 aa25.49■■□□□ 1.67
ATG4D-201ENST00000309469 INTS4Q96HW7 963 aaKnown RBP25.49■■□□□ 1.67
ATG4D-201ENST00000309469 HMG20BQ9P0W2 317 aa25.49■■□□□ 1.67
ATG4D-201ENST00000309469 SRP68Q9UHB9 627 aaKnown RBP25.49■■□□□ 1.67
ATG4D-201ENST00000309469 CYP46A1Q9Y6A2 500 aa25.49■■□□□ 1.67
ATG4D-201ENST00000309469 IGHMBP2P38935 993 aaKnown RBP25.49■■□□□ 1.67
ATG4D-201ENST00000309469 ZAP70P43403 619 aa25.49■■□□□ 1.67
ATG4D-201ENST00000309469 AK2P54819 239 aa25.49■■□□□ 1.67
ATG4D-201ENST00000309469 LRRFIP1Q32MZ4 808 aaKnown RBP25.49■■□□□ 1.67
ATG4D-201ENST00000309469 LAMB2P55268 1798 aa25.48■■□□□ 1.67
ATG4D-201ENST00000309469 SCN7AQ01118 1682 aa25.48■■□□□ 1.67
ATG4D-201ENST00000309469 CPA1P15085 419 aa25.48■■□□□ 1.67
ATG4D-201ENST00000309469 TSGA10IPQ3SY00 556 aa25.48■■□□□ 1.67
ATG4D-201ENST00000309469 SLFNL1Q499Z3 407 aa25.48■■□□□ 1.67
ATG4D-201ENST00000309469 VPS53Q5VIR6 699 aa25.48■■□□□ 1.67
ATG4D-201ENST00000309469 U3KPZ7 1027 aaPredicted RBP25.48■■□□□ 1.67
ATG4D-201ENST00000309469 LY75O60449 1722 aa25.48■■□□□ 1.67
ATG4D-201ENST00000309469 PSMA5P28066 241 aa25.47■■□□□ 1.67
ATG4D-201ENST00000309469 RUFY3Q7L099 469 aa25.47■■□□□ 1.67
ATG4D-201ENST00000309469 ARHGEF1Q92888 912 aaKnown RBP25.47■■□□□ 1.67
ATG4D-201ENST00000309469 PDRG1Q9NUG6 133 aa25.47■■□□□ 1.67
ATG4D-201ENST00000309469 SBF2Q86WG5 1849 aa25.47■■□□□ 1.67
ATG4D-201ENST00000309469 SF3B3Q15393 1217 aaKnown RBP25.47■■□□□ 1.67
ATG4D-201ENST00000309469 SLC10A5Q5PT55 438 aa25.47■■□□□ 1.67
ATG4D-201ENST00000309469 GBP4Q96PP9 640 aa25.47■■□□□ 1.67
ATG4D-201ENST00000309469 SETDB2Q96T68 719 aa25.47■■□□□ 1.67
ATG4D-201ENST00000309469 LIMCH1Q9UPQ0 1083 aa25.47■■□□□ 1.67
ATG4D-201ENST00000309469 RPAP1Q9BWH6 1393 aaPredicted RBP25.46■■□□□ 1.67
ATG4D-201ENST00000309469 MCAMP43121 646 aa25.46■■□□□ 1.67
ATG4D-201ENST00000309469 CYP2E1P05181 493 aaPredicted RBP25.45■■□□□ 1.67
ATG4D-201ENST00000309469 ZFYP08048 801 aaPredicted RBP25.45■■□□□ 1.67
ATG4D-201ENST00000309469 GTF2E1P29083 439 aaPredicted RBP25.45■■□□□ 1.67
ATG4D-201ENST00000309469 CCDC102BQ68D86 513 aa25.45■■□□□ 1.67
ATG4D-201ENST00000309469 AMIGO3Q86WK7 504 aa25.45■■□□□ 1.67
ATG4D-201ENST00000309469 NYXQ9GZU5 481 aa25.45■■□□□ 1.67
ATG4D-201ENST00000309469 SLC5A1P13866 664 aa25.45■■□□□ 1.66
ATG4D-201ENST00000309469 GSE1Q14687 1217 aa25.45■■□□□ 1.66
ATG4D-201ENST00000309469 PI16Q6UXB8 463 aa25.45■■□□□ 1.66
ATG4D-201ENST00000309469 CDC5LQ99459 802 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms