RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 HSP90AA4PQ58FG1 418 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 OSBPL3Q9H4L5 887 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 USP31Q70CQ4 1352 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 PES1O00541 588 aaKnown RBP14.85□□□□□ -0.03
RETREG3-201ENST00000309428 CPLX1O14810 134 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 PHKG2P15735 406 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 CEP126Q9P2H0 1117 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 SMIM5Q71RC9 77 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 GJB4Q9NTQ9 266 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 CCDC66A2RUB6 948 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 PSMA5P28066 241 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 JAG2Q9Y219 1238 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 ERBB3P21860 1342 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 PDCP20941 246 aa14.83□□□□□ -0.03
RETREG3-201ENST00000309428 GTF2E1P29083 439 aaPredicted RBP14.83□□□□□ -0.03
RETREG3-201ENST00000309428 KAZALD1Q96I82 304 aa14.83□□□□□ -0.03
RETREG3-201ENST00000309428 DLG5Q8TDM6 1919 aa14.83□□□□□ -0.03
RETREG3-201ENST00000309428 ZSWIM4Q9H7M6 989 aa14.83□□□□□ -0.04
RETREG3-201ENST00000309428 TNNI3KQ59H18 835 aa14.83□□□□□ -0.04
RETREG3-201ENST00000309428 FPGT-TNNI3KV9GXZ4 949 aa14.83□□□□□ -0.04
RETREG3-201ENST00000309428 NEURL4Q96JN8 1562 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 ALDH1L1O75891 902 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 LIG1P18858 919 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 TYRO3Q06418 890 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 ATP2B3Q16720 1220 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 METTL24Q5JXM2 366 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 ZCRB1Q8TBF4 217 aaKnown RBP14.82□□□□□ -0.04
RETREG3-201ENST00000309428 NEK1Q96PY6 1258 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 STAP2Q9UGK3 403 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 NRBP1Q9UHY1 535 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 CEP135Q66GS9 1140 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 NFXL1Q6ZNB6 911 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 POLA2Q14181 598 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 DNAJC10Q8IXB1 793 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 GTF3C6Q969F1 213 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 METTL22Q9BUU2 404 aaPredicted RBP14.82□□□□□ -0.04
RETREG3-201ENST00000309428 TMOD3Q9NYL9 352 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.82□□□□□ -0.04
RETREG3-201ENST00000309428 ADORA1P30542 326 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 KDRP35968 1356 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 ASAP1Q9ULH1 1129 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 SPATA31D1Q6ZQQ2 1576 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 PIP4K2BP78356 416 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 TEX35Q5T0J7 233 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 FAM200AQ8TCP9 573 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 URI1O94763 535 aaPredicted RBP14.81□□□□□ -0.04
RETREG3-201ENST00000309428 SKILP12757 684 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 UVSSAQ2YD98 709 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 ANAPC15P60006 121 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 RALYLQ86SE5 291 aaKnown RBP14.8□□□□□ -0.04
RETREG3-201ENST00000309428 CWC25Q9NXE8 425 aaPredicted RBP14.8□□□□□ -0.04
RETREG3-201ENST00000309428 PXDNQ92626 1479 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 TMEM94Q12767 1356 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 LDHAL6AQ6ZMR3 332 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 PTPN21Q16825 1174 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 MYL10Q9BUA6 226 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 ABCF2Q9UG63 623 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 A0A1B0GUL7 405 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 STK38Q15208 465 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 TRMT112Q9UI30 125 aaKnown RBP14.79□□□□□ -0.04
RETREG3-201ENST00000309428 ZBTB22O15209 634 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 MTMR6Q9Y217 621 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 TERF1P54274 439 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 TTC6Q86TZ1 520 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 UBXN4Q92575 508 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 TAF5LO75529 589 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 SERPINC1P01008 464 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 KIF18AQ8NI77 898 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 ARGLU1Q9NWB6 273 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-201ENST00000309428 KIF24Q5T7B8 1368 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 PTPN12Q05209 780 aaKnown RBP14.78□□□□□ -0.04
RETREG3-201ENST00000309428 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 SYNE3Q6ZMZ3 975 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 MICU3Q86XE3 530 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 ZKSCAN3Q9BRR0 538 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 INCENPQ9NQS7 918 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 PAG1Q9NWQ8 432 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 RGPD8O14715 1765 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-201ENST00000309428 DIP2AQ14689 1571 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 TTC41PQ6P2S7 1318 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 CYP2E1P05181 493 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-201ENST00000309428 KIF6Q6ZMV9 814 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 NRKQ7Z2Y5 1582 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 KNDC1Q76NI1 1749 aa14.77□□□□□ -0.04
RETREG3-201ENST00000309428 DCAF5Q96JK2 942 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 BTG4Q9NY30 223 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 CYP21A2P08686 494 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 TMC6Q7Z403 805 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 PDLIM2Q96JY6 352 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 PDIA6Q15084 440 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 FAM182BQ5T319 152 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 NUP133Q8WUM0 1156 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 SALL3Q9BXA9 1300 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 NBPF26B4DH59 902 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 MARCKSP29966 332 aaPredicted RBP14.76□□□□□ -0.05
RETREG3-201ENST00000309428 IFIT5Q13325 482 aaKnown RBP14.76□□□□□ -0.05
RETREG3-201ENST00000309428 ELF2Q15723 593 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 NBPF14Q5TI25 921 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 NBPF10Q6P3W6 841 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms