RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 HSP90AA4PQ58FG1 418 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 OSBPL3Q9H4L5 887 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 USP31Q70CQ4 1352 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 PES1O00541 588 aaKnown RBP14.85□□□□□ -0.03
RETREG3-201ENST00000309428 CPLX1O14810 134 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 PHKG2P15735 406 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 CEP126Q9P2H0 1117 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 SMIM5Q71RC9 77 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 GJB4Q9NTQ9 266 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 CCDC66A2RUB6 948 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 PSMA5P28066 241 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 JAG2Q9Y219 1238 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 ERBB3P21860 1342 aa14.84□□□□□ -0.03
RETREG3-201ENST00000309428 PDCP20941 246 aa14.83□□□□□ -0.03
RETREG3-201ENST00000309428 GTF2E1P29083 439 aaPredicted RBP14.83□□□□□ -0.03
RETREG3-201ENST00000309428 KAZALD1Q96I82 304 aa14.83□□□□□ -0.03
RETREG3-201ENST00000309428 DLG5Q8TDM6 1919 aa14.83□□□□□ -0.03
RETREG3-201ENST00000309428 ZSWIM4Q9H7M6 989 aa14.83□□□□□ -0.04
RETREG3-201ENST00000309428 TNNI3KQ59H18 835 aa14.83□□□□□ -0.04
RETREG3-201ENST00000309428 FPGT-TNNI3KV9GXZ4 949 aa14.83□□□□□ -0.04
RETREG3-201ENST00000309428 NEURL4Q96JN8 1562 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 ALDH1L1O75891 902 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 LIG1P18858 919 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 TYRO3Q06418 890 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 ATP2B3Q16720 1220 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 METTL24Q5JXM2 366 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 ZCRB1Q8TBF4 217 aaKnown RBP14.82□□□□□ -0.04
RETREG3-201ENST00000309428 NEK1Q96PY6 1258 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 STAP2Q9UGK3 403 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 NRBP1Q9UHY1 535 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 CEP135Q66GS9 1140 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 NFXL1Q6ZNB6 911 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 POLA2Q14181 598 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 DNAJC10Q8IXB1 793 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 GTF3C6Q969F1 213 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 METTL22Q9BUU2 404 aaPredicted RBP14.82□□□□□ -0.04
RETREG3-201ENST00000309428 TMOD3Q9NYL9 352 aa14.82□□□□□ -0.04
RETREG3-201ENST00000309428 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.82□□□□□ -0.04
RETREG3-201ENST00000309428 ADORA1P30542 326 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 KDRP35968 1356 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 ASAP1Q9ULH1 1129 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 SPATA31D1Q6ZQQ2 1576 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 PIP4K2BP78356 416 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 TEX35Q5T0J7 233 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 FAM200AQ8TCP9 573 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 URI1O94763 535 aaPredicted RBP14.81□□□□□ -0.04
RETREG3-201ENST00000309428 SKILP12757 684 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 UVSSAQ2YD98 709 aa14.81□□□□□ -0.04
RETREG3-201ENST00000309428 ANAPC15P60006 121 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 RALYLQ86SE5 291 aaKnown RBP14.8□□□□□ -0.04
RETREG3-201ENST00000309428 CWC25Q9NXE8 425 aaPredicted RBP14.8□□□□□ -0.04
RETREG3-201ENST00000309428 PXDNQ92626 1479 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 TMEM94Q12767 1356 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 LDHAL6AQ6ZMR3 332 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 PTPN21Q16825 1174 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 MYL10Q9BUA6 226 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 ABCF2Q9UG63 623 aa14.8□□□□□ -0.04
RETREG3-201ENST00000309428 A0A1B0GUL7 405 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 STK38Q15208 465 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 TRMT112Q9UI30 125 aaKnown RBP14.79□□□□□ -0.04
RETREG3-201ENST00000309428 ZBTB22O15209 634 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 MTMR6Q9Y217 621 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 TERF1P54274 439 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 TTC6Q86TZ1 520 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 UBXN4Q92575 508 aa14.79□□□□□ -0.04
RETREG3-201ENST00000309428 TAF5LO75529 589 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 SERPINC1P01008 464 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 KIF18AQ8NI77 898 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 ARGLU1Q9NWB6 273 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-201ENST00000309428 KIF24Q5T7B8 1368 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 PTPN12Q05209 780 aaKnown RBP14.78□□□□□ -0.04
RETREG3-201ENST00000309428 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 SYNE3Q6ZMZ3 975 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 MICU3Q86XE3 530 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 ZKSCAN3Q9BRR0 538 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 INCENPQ9NQS7 918 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 PAG1Q9NWQ8 432 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 RGPD8O14715 1765 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-201ENST00000309428 DIP2AQ14689 1571 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 TTC41PQ6P2S7 1318 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 CYP2E1P05181 493 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-201ENST00000309428 KIF6Q6ZMV9 814 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 NRKQ7Z2Y5 1582 aa14.78□□□□□ -0.04
RETREG3-201ENST00000309428 KNDC1Q76NI1 1749 aa14.77□□□□□ -0.04
RETREG3-201ENST00000309428 DCAF5Q96JK2 942 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 BTG4Q9NY30 223 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 CYP21A2P08686 494 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 TMC6Q7Z403 805 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 PDLIM2Q96JY6 352 aa14.77□□□□□ -0.05
RETREG3-201ENST00000309428 PDIA6Q15084 440 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 FAM182BQ5T319 152 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 NUP133Q8WUM0 1156 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 SALL3Q9BXA9 1300 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 NBPF26B4DH59 902 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 MARCKSP29966 332 aaPredicted RBP14.76□□□□□ -0.05
RETREG3-201ENST00000309428 IFIT5Q13325 482 aaKnown RBP14.76□□□□□ -0.05
RETREG3-201ENST00000309428 ELF2Q15723 593 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 NBPF14Q5TI25 921 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 NBPF10Q6P3W6 841 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms