RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 CDC45O75419 566 aa15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 GLRX3O76003 335 aaKnown RBP15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 TFCP2Q12800 502 aa15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 AACSQ86V21 672 aa15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 GPATCH3Q96I76 525 aa15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 ECHDC1Q9NTX5 307 aa15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 TNNI3KQ59H18 835 aa15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 PUS3Q9BZE2 481 aaKnown RBP15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 RIPOR2Q9Y4F9 1068 aa15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 FPGT-TNNI3KV9GXZ4 949 aa15.7■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 SEC24BO95487 1268 aa15.69■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 HOXA10P31260 410 aaPredicted RBP15.69■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 LRRC24Q50LG9 513 aa15.69■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 ATF5Q9Y2D1 282 aaPredicted RBP15.69■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 COL11A2P13942 1736 aaPredicted RBP15.69■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 PTGER2P43116 358 aa15.68■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 TAF7LQ5H9L4 462 aa15.68■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 BCL11AQ9H165 835 aa15.68■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 RNF216Q9NWF9 866 aaPredicted RBP15.68■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 CEP126Q9P2H0 1117 aa15.68■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 KIF13BQ9NQT8 1826 aa15.67■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 TAF1P21675 1872 aa15.67■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 SRGNP10124 158 aa15.67■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 PDE6BP35913 854 aa15.67■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 LDHAL6AQ6ZMR3 332 aa15.67■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 CELF1Q92879 486 aaKnown RBP15.67■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 CDC5LQ99459 802 aaKnown RBP15.67■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 CCDC8Q9H0W5 538 aaPredicted RBP15.67■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 AKAP2Q9Y2D5 859 aa15.67■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 TSHZ3Q63HK5 1081 aa15.66■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 DDX46Q7L014 1031 aaKnown RBP15.66■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 CRAMP1Q96RY5 1269 aa15.66■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 ATP5JP18859 108 aa15.65■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 POLD1P28340 1107 aa15.65■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 RPS8P62241 208 aaKnown RBP15.65■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 GRAPQ13588 217 aa15.65■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 GRAPLQ8TC17 118 aaPredicted RBP15.65■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 DBNLQ9UJU6 430 aaKnown RBP15.65■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 SPEF2Q9C093 1822 aa15.65■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 ANKRD18AQ8IVF6 992 aa15.64■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 VGLL2Q8N8G2 317 aa15.64■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 RPGRQ92834 1020 aaKnown RBP15.64■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 BSDC1Q9NW68 430 aaPredicted RBP15.64■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 MROH5Q6ZUA9 1318 aa15.64■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 KIAA1551Q9HCM1 1747 aa15.64■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 NPR1P16066 1061 aa15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 IGHMBP2P38935 993 aaKnown RBP15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 CNTROBQ8N137 903 aa15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 RBM17Q96I25 401 aaKnown RBP15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 TLR7Q9NYK1 1049 aaKnown RBP15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 ZNF609O15014 1411 aa15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 TICAM2Q86XR7 235 aa15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 C2CD5Q86YS7 1000 aa15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 TBC1D32Q96NH3 1257 aa15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 MPHOSPH8Q99549 860 aa15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 CNNM1Q9NRU3 951 aa15.63■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 A0A1B0GUL6 1792 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 DLEC1Q9Y238 1755 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 A0A1B0GUL7 405 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 TRIM6-TRIM34B2RNG4 842 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 PDE8BO95263 885 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 METTL24Q5JXM2 366 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 STYK1Q6J9G0 422 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 EVI5LQ96CN4 794 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 MASTLQ96GX5 879 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 DBNDD2Q9BQY9 259 aa15.62■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 H0YIN7 160 aa15.61■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 CHMLP26374 656 aa15.61■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 CHRNA5P30532 468 aa15.61■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 ANP32AP39687 249 aaKnown RBP15.61■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 TIMM10P62072 90 aa15.61■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 RILPL2Q969X0 211 aa15.61■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 MINPP1Q9UNW1 487 aa15.61■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 LRRC37AA6NMS7 1700 aa15.61■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 BBOX1O75936 387 aa15.6■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 SLC51AQ86UW1 340 aa15.6■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 SPON1Q9HCB6 807 aa15.6■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 FGFR2P21802 821 aa15.6■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 KCNA3P22001 575 aa15.6■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 MFAP1P55081 439 aaKnown RBP15.6■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 CHRNDQ07001 517 aa15.6■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 NEUROD6Q96NK8 337 aa15.6■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 HAUS7Q99871 368 aa15.6■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 EPB41L2O43491 1005 aaKnown RBP15.59■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 ALDH1B1P30837 517 aa15.59■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 RBM25P49756 843 aaKnown RBP15.59■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 ATP2B3Q16720 1220 aa15.59■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 ZNF512BQ96KM6 892 aaPredicted RBP15.59■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 C22orf23Q9BZE7 217 aa15.59■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 CD2APQ9Y5K6 639 aa15.59■□□□□ 0.09
SHANK2-AS3-201ENST00000307548 REC8O95072 547 aa15.58■□□□□ 0.08
SHANK2-AS3-201ENST00000307548 TGFB2P61812 414 aa15.58■□□□□ 0.08
SHANK2-AS3-201ENST00000307548 TMC4Q7Z404 712 aa15.58■□□□□ 0.08
SHANK2-AS3-201ENST00000307548 HELBQ8NG08 1087 aaPredicted RBP15.58■□□□□ 0.08
SHANK2-AS3-201ENST00000307548 LPIN2Q92539 896 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms