RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 EDC3Q96F86 508 aaKnown RBP15.09■□□□□ 0.01
TRIM35-201ENST00000305364 TOMM22Q9NS69 142 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 AATKQ6ZMQ8 1374 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 ADGRB1O14514 1584 aa15.08■□□□□ 0.01
TRIM35-201ENST00000305364 HMGB1P09429 215 aaKnown RBP15.08■□□□□ 0.01
TRIM35-201ENST00000305364 APPP05067 770 aa15.08■□□□□ 0
TRIM35-201ENST00000305364 CAPN2P17655 700 aa15.08■□□□□ 0
TRIM35-201ENST00000305364 CEBPAP49715 358 aaPredicted RBP15.08■□□□□ 0
TRIM35-201ENST00000305364 ZSCAN26Q16670 478 aa15.08■□□□□ 0
TRIM35-201ENST00000305364 MPRIPQ6WCQ1 1025 aa15.08■□□□□ 0
TRIM35-201ENST00000305364 RSPH14Q9UHP6 348 aa15.08■□□□□ 0
TRIM35-201ENST00000305364 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
TRIM35-201ENST00000305364 ASXL2Q76L83 1435 aa15.08■□□□□ 0
TRIM35-201ENST00000305364 MARCKSP29966 332 aaPredicted RBP15.07■□□□□ 0
TRIM35-201ENST00000305364 KIF4BQ2VIQ3 1234 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 NDUFB9Q9Y6M9 179 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 SMC1AQ14683 1233 aaKnown RBP15.07■□□□□ 0
TRIM35-201ENST00000305364 KLHDC4Q8TBB5 520 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 CPLX3Q8WVH0 158 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 FANCCQ00597 558 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 NFXL1Q6ZNB6 911 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 PPFIBP1Q86W92 1011 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 VPS18Q9P253 973 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 TCHHQ07283 1943 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 SALL3Q9BXA9 1300 aa15.07■□□□□ 0
TRIM35-201ENST00000305364 KARSQ15046 597 aaKnown RBP15.06■□□□□ 0
TRIM35-201ENST00000305364 OTUD7BQ6GQQ9 843 aa15.06■□□□□ 0
TRIM35-201ENST00000305364 CERS3Q8IU89 383 aa15.06■□□□□ 0
TRIM35-201ENST00000305364 ORC3Q9UBD5 711 aaPredicted RBP15.06■□□□□ 0
TRIM35-201ENST00000305364 SPTLC2O15270 562 aa15.06■□□□□ 0
TRIM35-201ENST00000305364 PHACTR2O75167 634 aa15.06■□□□□ 0
TRIM35-201ENST00000305364 IRX3P78415 501 aaPredicted RBP15.06■□□□□ 0
TRIM35-201ENST00000305364 IPO4Q8TEX9 1081 aaKnown RBP15.06■□□□□ 0
TRIM35-201ENST00000305364 SARM1Q6SZW1 724 aa15.06■□□□□ 0
TRIM35-201ENST00000305364 SYKP43405 635 aa15.05■□□□□ 0
TRIM35-201ENST00000305364 TAF7LQ5H9L4 462 aa15.05■□□□□ 0
TRIM35-201ENST00000305364 KCNG4Q8TDN1 519 aa15.05■□□□□ 0
TRIM35-201ENST00000305364 EAF2Q96CJ1 260 aaPredicted RBP15.05■□□□□ 0
TRIM35-201ENST00000305364 PPP2R3AQ06190 1150 aa15.05■□□□□ -0
TRIM35-201ENST00000305364 LRRFIP1Q32MZ4 808 aaKnown RBP15.05■□□□□ -0
TRIM35-201ENST00000305364 SLFNL1Q499Z3 407 aa15.05■□□□□ -0
TRIM35-201ENST00000305364 DEF6Q9H4E7 631 aa15.05■□□□□ -0
TRIM35-201ENST00000305364 MAP3K5Q99683 1374 aa15.05■□□□□ -0
TRIM35-201ENST00000305364 USP32Q8NFA0 1604 aa15.05■□□□□ -0
TRIM35-201ENST00000305364 ATF3P18847 181 aa15.05■□□□□ -0
TRIM35-201ENST00000305364 GTF2A1P52655 376 aaPredicted RBP15.05■□□□□ -0
TRIM35-201ENST00000305364 RBM6P78332 1123 aaKnown RBP15.05■□□□□ -0
TRIM35-201ENST00000305364 ZCCHC17Q9NP64 241 aaKnown RBP15.05■□□□□ -0
TRIM35-201ENST00000305364 PUF60Q9UHX1 559 aaKnown RBP15.05■□□□□ -0
TRIM35-201ENST00000305364 GOLGA6L9A6NEM1 432 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 GRM8O00222 908 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 HAND2P61296 217 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 FAM193AP78312 1265 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 GOLGA1Q92805 767 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 PSDA5PKW4 1024 aaPredicted RBP15.04■□□□□ -0
TRIM35-201ENST00000305364 GOLIM4O00461 696 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 KIF5CO60282 957 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 DPCR1Q3MIW9 517 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 PLEKHO1Q53GL0 409 aaPredicted RBP15.04■□□□□ -0
TRIM35-201ENST00000305364 DHX32Q7L7V1 743 aaKnown RBP15.04■□□□□ -0
TRIM35-201ENST00000305364 CNNM3Q8NE01 707 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 IL17REQ8NFR9 667 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 ZCCHC11Q5TAX3 1644 aaKnown RBP15.04■□□□□ -0
TRIM35-201ENST00000305364 MCMDC2Q4G0Z9 681 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 AXDND1Q5T1B0 1012 aaPredicted RBP15.04■□□□□ -0
TRIM35-201ENST00000305364 KIAA1468Q9P260 1216 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 FLT4P35916 1363 aa15.04■□□□□ -0
TRIM35-201ENST00000305364 GOLGA8BA8MQT2 603 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 FKBP4Q02790 459 aaKnown RBP eCLIP15.03■□□□□ -0
TRIM35-201ENST00000305364 RESTQ13127 1097 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 IQCB1Q15051 598 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 PTPN21Q16825 1174 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 BICC1Q9H694 974 aaKnown RBP15.03■□□□□ -0
TRIM35-201ENST00000305364 TTC21AQ8NDW8 1320 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 ATP7BP35670 1465 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 CCZ1BP86790 482 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 CCZ1P86791 482 aaPredicted RBP15.03■□□□□ -0
TRIM35-201ENST00000305364 POLA2Q14181 598 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 TSR1Q2NL82 804 aaKnown RBP15.03■□□□□ -0
TRIM35-201ENST00000305364 MROH2AA6NES4 1674 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 PPRC1Q5VV67 1664 aaKnown RBP15.03■□□□□ -0
TRIM35-201ENST00000305364 EVA1CP58658 441 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 SAFBQ15424 915 aaKnown RBP eCLIP15.03■□□□□ -0
TRIM35-201ENST00000305364 ZNF589Q86UQ0 364 aaPredicted RBP15.03■□□□□ -0
TRIM35-201ENST00000305364 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
TRIM35-201ENST00000305364 LZTFL1Q9NQ48 299 aa15.03■□□□□ -0
TRIM35-201ENST00000305364 ALDH1L1O75891 902 aa15.02■□□□□ -0
TRIM35-201ENST00000305364 RAD51AP2Q09MP3 1159 aa15.02■□□□□ -0
TRIM35-201ENST00000305364 KLHL10Q6JEL2 608 aa15.02■□□□□ -0
TRIM35-201ENST00000305364 NAA16Q6N069 864 aaPredicted RBP15.02■□□□□ -0
TRIM35-201ENST00000305364 NYAP1Q6ZVC0 841 aa15.02■□□□□ -0
TRIM35-201ENST00000305364 GOLGA8FQ08AF8 430 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 GOLGA8DPQ0D2H9 430 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 TOB2Q14106 344 aaPredicted RBP15.02□□□□□ -0.01
TRIM35-201ENST00000305364 BEND3Q5T5X7 828 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 KSR2Q6VAB6 950 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 MYD88Q99836 296 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms