RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 CHMP3Q9Y3E7 222 aa19.16■□□□□ 0.66
LONRF3-201ENST00000304778 HCLS1P14317 486 aaPredicted RBP19.16■□□□□ 0.66
LONRF3-201ENST00000304778 GJB2P29033 226 aa19.16■□□□□ 0.66
LONRF3-201ENST00000304778 NECTIN1Q15223 517 aa19.16■□□□□ 0.66
LONRF3-201ENST00000304778 AHDC1Q5TGY3 1603 aaPredicted RBP19.16■□□□□ 0.66
LONRF3-201ENST00000304778 COL16A1Q07092 1604 aaPredicted RBP19.15■□□□□ 0.66
LONRF3-201ENST00000304778 PDCL2Q8N4E4 241 aa19.15■□□□□ 0.66
LONRF3-201ENST00000304778 CCDC191Q8NCU4 936 aa19.15■□□□□ 0.66
LONRF3-201ENST00000304778 FIBPO43427 364 aa19.15■□□□□ 0.66
LONRF3-201ENST00000304778 TNNI3KQ59H18 835 aa19.14■□□□□ 0.66
LONRF3-201ENST00000304778 MTMR6Q9Y217 621 aa19.14■□□□□ 0.66
LONRF3-201ENST00000304778 FPGT-TNNI3KV9GXZ4 949 aa19.14■□□□□ 0.66
LONRF3-201ENST00000304778 COL22A1Q8NFW1 1626 aaPredicted RBP19.14■□□□□ 0.65
LONRF3-201ENST00000304778 HIP1O00291 1037 aa19.14■□□□□ 0.65
LONRF3-201ENST00000304778 EXOC5O00471 708 aa19.14■□□□□ 0.65
LONRF3-201ENST00000304778 ZKSCAN1P17029 563 aaPredicted RBP19.14■□□□□ 0.65
LONRF3-201ENST00000304778 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.65
LONRF3-201ENST00000304778 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
LONRF3-201ENST00000304778 DBNLQ9UJU6 430 aaKnown RBP19.13■□□□□ 0.65
LONRF3-201ENST00000304778 RBM8AQ9Y5S9 174 aaKnown RBP19.13■□□□□ 0.65
LONRF3-201ENST00000304778 ADCY5O95622 1261 aa19.13■□□□□ 0.65
LONRF3-201ENST00000304778 U2AF2P26368 475 aaKnown RBP eCLIP19.13■□□□□ 0.65
LONRF3-201ENST00000304778 ST3GAL1Q11201 340 aa19.13■□□□□ 0.65
LONRF3-201ENST00000304778 TJP1Q07157 1748 aa19.13■□□□□ 0.65
LONRF3-201ENST00000304778 CGNQ9P2M7 1197 aaKnown RBP19.12■□□□□ 0.65
LONRF3-201ENST00000304778 ITGB4P16144 1822 aa19.12■□□□□ 0.65
LONRF3-201ENST00000304778 CREB3L3Q68CJ9 461 aa19.12■□□□□ 0.65
LONRF3-201ENST00000304778 MAP4K1Q92918 833 aa19.12■□□□□ 0.65
LONRF3-201ENST00000304778 FAM227BQ96M60 508 aa19.12■□□□□ 0.65
LONRF3-201ENST00000304778 ISCA1Q9BUE6 129 aa19.12■□□□□ 0.65
LONRF3-201ENST00000304778 SNRKQ9NRH2 765 aa19.12■□□□□ 0.65
LONRF3-201ENST00000304778 ADAMTS2O95450 1211 aa19.11■□□□□ 0.65
LONRF3-201ENST00000304778 TCIRG1Q13488 830 aa19.11■□□□□ 0.65
LONRF3-201ENST00000304778 ME3Q16798 604 aa19.11■□□□□ 0.65
LONRF3-201ENST00000304778 STARD3NLO95772 234 aa19.11■□□□□ 0.65
LONRF3-201ENST00000304778 DNM1Q05193 864 aaKnown RBP19.11■□□□□ 0.65
LONRF3-201ENST00000304778 NMIQ13287 307 aaPredicted RBP19.11■□□□□ 0.65
LONRF3-201ENST00000304778 SYTL4Q96C24 671 aaPredicted RBP19.11■□□□□ 0.65
LONRF3-201ENST00000304778 BCL9O00512 1426 aa19.11■□□□□ 0.65
LONRF3-201ENST00000304778 VGLL3A8MV65 326 aa19.11■□□□□ 0.65
LONRF3-201ENST00000304778 AP5Z1O43299 807 aa19.11■□□□□ 0.65
LONRF3-201ENST00000304778 FSD1Q9BTV5 496 aa19.11■□□□□ 0.65
LONRF3-201ENST00000304778 EDC3Q96F86 508 aaKnown RBP19.1■□□□□ 0.65
LONRF3-201ENST00000304778 SLC4A9Q96Q91 983 aa19.1■□□□□ 0.65
LONRF3-201ENST00000304778 NUTM2BA6NNL0 878 aaPredicted RBP19.1■□□□□ 0.65
LONRF3-201ENST00000304778 NUTM2EB1AL46 878 aaPredicted RBP19.1■□□□□ 0.65
LONRF3-201ENST00000304778 ZBTB22O15209 634 aa19.1■□□□□ 0.65
LONRF3-201ENST00000304778 KCNJ4P48050 445 aa19.1■□□□□ 0.65
LONRF3-201ENST00000304778 KIF6Q6ZMV9 814 aa19.1■□□□□ 0.65
LONRF3-201ENST00000304778 NUTM2AQ8IVF1 878 aaPredicted RBP19.1■□□□□ 0.65
LONRF3-201ENST00000304778 DBNDD2Q9BQY9 259 aa19.1■□□□□ 0.65
LONRF3-201ENST00000304778 LTBP4Q8N2S1 1624 aa19.09■□□□□ 0.65
LONRF3-201ENST00000304778 ATP5JP18859 108 aa19.09■□□□□ 0.65
LONRF3-201ENST00000304778 ATG9AQ7Z3C6 839 aa19.09■□□□□ 0.65
LONRF3-201ENST00000304778 SPC24Q8NBT2 197 aa19.09■□□□□ 0.65
LONRF3-201ENST00000304778 FUCA2Q9BTY2 467 aa19.09■□□□□ 0.65
LONRF3-201ENST00000304778 UBAP1LF5GYI3 381 aa19.09■□□□□ 0.65
LONRF3-201ENST00000304778 ZNF771Q7L3S4 317 aaPredicted RBP19.09■□□□□ 0.65
LONRF3-201ENST00000304778 TPCN1Q9ULQ1 816 aa19.09■□□□□ 0.65
LONRF3-201ENST00000304778 VPS37CA5D8V6 355 aaPredicted RBP19.08■□□□□ 0.65
LONRF3-201ENST00000304778 SLC27A2O14975 620 aa19.08■□□□□ 0.65
LONRF3-201ENST00000304778 PSMA5P28066 241 aa19.08■□□□□ 0.65
LONRF3-201ENST00000304778 GIMAP6Q6P9H5 292 aa19.08■□□□□ 0.65
LONRF3-201ENST00000304778 ZNF594Q96JF6 807 aaPredicted RBP19.08■□□□□ 0.65
LONRF3-201ENST00000304778 PLCH1Q4KWH8 1693 aa19.08■□□□□ 0.65
LONRF3-201ENST00000304778 MED23Q9ULK4 1368 aa19.08■□□□□ 0.64
LONRF3-201ENST00000304778 A0A0D9SFI3 127 aa19.08■□□□□ 0.64
LONRF3-201ENST00000304778 PDIA4P13667 645 aaKnown RBP19.08■□□□□ 0.64
LONRF3-201ENST00000304778 NECAB1Q8N987 351 aa19.08■□□□□ 0.64
LONRF3-201ENST00000304778 NDUFB9Q9Y6M9 179 aa19.08■□□□□ 0.64
LONRF3-201ENST00000304778 TAF3Q5VWG9 929 aa19.07■□□□□ 0.64
LONRF3-201ENST00000304778 JCADQ9P266 1359 aa19.07■□□□□ 0.64
LONRF3-201ENST00000304778 CYP19A1P11511 503 aaPredicted RBP19.07■□□□□ 0.64
LONRF3-201ENST00000304778 CCDC9Q9Y3X0 531 aaKnown RBP19.07■□□□□ 0.64
LONRF3-201ENST00000304778 LRRC24Q50LG9 513 aa19.06■□□□□ 0.64
LONRF3-201ENST00000304778 RNF20Q5VTR2 975 aa19.06■□□□□ 0.64
LONRF3-201ENST00000304778 TRIM28Q13263 835 aaKnown RBP19.06■□□□□ 0.64
LONRF3-201ENST00000304778 PYCARDQ9ULZ3 195 aa19.06■□□□□ 0.64
LONRF3-201ENST00000304778 LRP6O75581 1613 aa19.06■□□□□ 0.64
LONRF3-201ENST00000304778 HLFQ16534 295 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 FAM89AQ96GI7 184 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 SPTLC3Q9NUV7 552 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 MAP3K15Q6ZN16 1313 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 IL15P40933 162 aaPredicted RBP19.05■□□□□ 0.64
LONRF3-201ENST00000304778 ANKRD1Q15327 319 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 LARP1BQ659C4 914 aaKnown RBP19.05■□□□□ 0.64
LONRF3-201ENST00000304778 BLOC1S2Q6QNY1 142 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 NEUROD6Q96NK8 337 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 DNAJC2Q99543 621 aaKnown RBP19.05■□□□□ 0.64
LONRF3-201ENST00000304778 KAT6BQ8WYB5 2073 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 SPATA31A1Q5TZJ5 1347 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 EYA2O00167 538 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 RIOK3O14730 519 aaKnown RBP19.05■□□□□ 0.64
LONRF3-201ENST00000304778 KDM4AO75164 1064 aa19.05■□□□□ 0.64
LONRF3-201ENST00000304778 PDCP20941 246 aa19.04■□□□□ 0.64
LONRF3-201ENST00000304778 TIMM10P62072 90 aa19.04■□□□□ 0.64
LONRF3-201ENST00000304778 COL9A3Q14050 684 aaPredicted RBP19.04■□□□□ 0.64
LONRF3-201ENST00000304778 GIGYF2Q6Y7W6 1299 aaKnown RBP19.04■□□□□ 0.64
LONRF3-201ENST00000304778 PUS3Q9BZE2 481 aaKnown RBP19.04■□□□□ 0.64
LONRF3-201ENST00000304778 ALDH8A1Q9H2A2 487 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms