RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ECHDC1Q9NTX5 307 aa8.96□□□□□ -0.98
SCN9A-201ENST00000303354 APOBRQ0VD83 1088 aa8.96□□□□□ -0.98
SCN9A-201ENST00000303354 RRAGBQ5VZM2 374 aa8.96□□□□□ -0.98
SCN9A-201ENST00000303354 TMOD4Q9NZQ9 345 aa8.96□□□□□ -0.98
SCN9A-201ENST00000303354 MAGI1Q96QZ7 1491 aaPredicted RBP8.96□□□□□ -0.98
SCN9A-201ENST00000303354 ZNF608Q9ULD9 1512 aaPredicted RBP8.96□□□□□ -0.98
SCN9A-201ENST00000303354 KIF4BQ2VIQ3 1234 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 TMC6Q7Z403 805 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 STX6O43752 255 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 DPP8Q6V1X1 898 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-201ENST00000303354 TOP1P11387 765 aaKnown RBP8.95□□□□□ -0.98
SCN9A-201ENST00000303354 MAP2K1Q02750 393 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-201ENST00000303354 QTRT2Q9H974 415 aaKnown RBP8.95□□□□□ -0.98
SCN9A-201ENST00000303354 DISP3Q9P2K9 1392 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 hCG_1642624A0A1W2PR95 340 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 STX17P56962 302 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 PRDM1O75626 825 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 NMIQ13287 307 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-201ENST00000303354 AKAP4Q5JQC9 854 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 GADL1Q6ZQY3 521 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 RHPN1Q8TCX5 695 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 PAIP2Q9BPZ3 127 aaKnown RBP8.95□□□□□ -0.98
SCN9A-201ENST00000303354 LGR6Q9HBX8 967 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 FAM135AQ9P2D6 1515 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 UQCRFS1P1P0C7P4 283 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 SCNN1DP51172 638 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 SMARCC1Q92922 1105 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-201ENST00000303354 NCAPD3P42695 1498 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 SMC1AQ14683 1233 aaKnown RBP8.95□□□□□ -0.98
SCN9A-201ENST00000303354 GPHNQ9NQX3 736 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-201ENST00000303354 EXOC1Q9NV70 894 aa8.95□□□□□ -0.98
SCN9A-201ENST00000303354 CAMSAP2Q08AD1 1489 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 KRT9P35527 623 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 STAT6P42226 847 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 IFRD2Q12894 506 aaPredicted RBP8.94□□□□□ -0.98
SCN9A-201ENST00000303354 CCDC148Q8NFR7 591 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 ZNF830Q96NB3 372 aaPredicted RBP8.94□□□□□ -0.98
SCN9A-201ENST00000303354 TRERF1Q96PN7 1200 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 CPA1P15085 419 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 RTN1Q16799 776 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 GRM8O00222 908 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 ZBTB43O43298 467 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 EEF2P13639 858 aaKnown RBP8.94□□□□□ -0.98
SCN9A-201ENST00000303354 TEX11Q8IYF3 940 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 KIFC2Q96AC6 838 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 SPDYE3A6NKU9 549 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 CETN2P41208 172 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 IFFO1Q0D2I5 559 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 TRIM47Q96LD4 638 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 PABPN1LA6NDY0 278 aaKnown RBP8.94□□□□□ -0.98
SCN9A-201ENST00000303354 GRPEL1Q9HAV7 217 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 ABL1P00519 1130 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 RAD51AP2Q09MP3 1159 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 LUZP1Q86V48 1076 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 HLTFQ14527 1009 aaKnown RBP eCLIP8.94□□□□□ -0.986e-7■■■□□ 14.9
SCN9A-201ENST00000303354 EYA1Q99502 592 aa8.94□□□□□ -0.98
SCN9A-201ENST00000303354 PPIP5K2O43314 1243 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 SPECC1Q5M775 1068 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 LEKR1Q6ZMV7 388 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 EHBP1L1Q8N3D4 1523 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 CCDC169A6NNP5 214 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 ITGA6P23229 1130 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 CTDSPL2Q05D32 466 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 PPP2R5CQ13362 524 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 BAG6P46379 1132 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 HECW1Q76N89 1606 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 APBB1IPQ7Z5R6 666 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-201ENST00000303354 ATP2C2O75185 946 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 GIMAP6Q6P9H5 292 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 TBC1D9Q6ZT07 1266 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 MRRFQ96E11 262 aaKnown RBP8.93□□□□□ -0.98
SCN9A-201ENST00000303354 PAG1Q9NWQ8 432 aa8.93□□□□□ -0.98
SCN9A-201ENST00000303354 RBM8AQ9Y5S9 174 aaKnown RBP8.93□□□□□ -0.98
SCN9A-201ENST00000303354 PPP2R5DQ14738 602 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 MBD4O95243 580 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 GTF2IP78347 998 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 IRX5P78411 483 aaPredicted RBP8.92□□□□□ -0.98
SCN9A-201ENST00000303354 ZNF174Q15697 407 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 RNF34Q969K3 372 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 RRP36Q96EU6 259 aaKnown RBP8.92□□□□□ -0.98
SCN9A-201ENST00000303354 C19orf44Q9H6X5 657 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 C14orf93Q9H972 538 aaKnown RBP8.92□□□□□ -0.98
SCN9A-201ENST00000303354 USP25Q9UHP3 1055 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 HOXC9P31274 260 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 G2E3Q7L622 706 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 HOOK3Q86VS8 718 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 WDR97A6NE52 1622 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 CALML3P27482 149 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 MAPKAPK5Q8IW41 473 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 TBC1D7Q9P0N9 293 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 SMIM23A6NLE4 172 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 POLR3GO15318 223 aaPredicted RBP8.92□□□□□ -0.98
SCN9A-201ENST00000303354 RNMTO43148 476 aaKnown RBP8.92□□□□□ -0.98
SCN9A-201ENST00000303354 KRT5P13647 590 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 LETM2Q2VYF4 491 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 CLIP2Q9UDT6 1046 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 CCDC141Q6ZP82 1450 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 DCAF17Q5H9S7 520 aaPredicted RBP8.92□□□□□ -0.98
SCN9A-201ENST00000303354 FAM47AQ5JRC9 791 aa8.92□□□□□ -0.98
SCN9A-201ENST00000303354 CMTR1Q8N1G2 835 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms