RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 RAD50Q92878 1312 aa14.55□□□□□ -0.08
TPM3-202ENST00000302206 RTL9Q8NET4 1388 aa14.55□□□□□ -0.08
TPM3-202ENST00000302206 LRRC24Q50LG9 513 aa14.54□□□□□ -0.08
TPM3-202ENST00000302206 TAF7LQ5H9L4 462 aa14.54□□□□□ -0.08
TPM3-202ENST00000302206 SUSD4Q5VX71 490 aa14.54□□□□□ -0.08
TPM3-202ENST00000302206 ZNF594Q96JF6 807 aaPredicted RBP14.54□□□□□ -0.08
TPM3-202ENST00000302206 HAUS7Q99871 368 aa14.54□□□□□ -0.08
TPM3-202ENST00000302206 DBNDD2Q9BQY9 259 aa14.54□□□□□ -0.08
TPM3-202ENST00000302206 SPEF2Q9C093 1822 aa14.54□□□□□ -0.08
TPM3-202ENST00000302206 ABCC12Q96J65 1359 aa14.53□□□□□ -0.08
TPM3-202ENST00000302206 NTSR2O95665 410 aa14.53□□□□□ -0.08
TPM3-202ENST00000302206 HMGB2P26583 209 aaKnown RBP14.53□□□□□ -0.08
TPM3-202ENST00000302206 POLD1P28340 1107 aa14.53□□□□□ -0.08
TPM3-202ENST00000302206 ANO2Q9NQ90 1003 aa14.53□□□□□ -0.08
TPM3-202ENST00000302206 RIPOR2Q9Y4F9 1068 aa14.53□□□□□ -0.08
TPM3-202ENST00000302206 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.08
TPM3-202ENST00000302206 DDX60Q8IY21 1712 aaKnown RBP14.52□□□□□ -0.08
TPM3-202ENST00000302206 ITGA6P23229 1130 aa14.52□□□□□ -0.09
TPM3-202ENST00000302206 ZNF827Q17R98 1081 aa14.52□□□□□ -0.09
TPM3-202ENST00000302206 KIAA1211Q6ZU35 1233 aa14.52□□□□□ -0.09
TPM3-202ENST00000302206 SYNE4Q8N205 404 aa14.52□□□□□ -0.09
TPM3-202ENST00000302206 PUS3Q9BZE2 481 aaKnown RBP14.52□□□□□ -0.09
TPM3-202ENST00000302206 LSG1Q9H089 658 aaKnown RBP14.52□□□□□ -0.09
TPM3-202ENST00000302206 BOLA2Q9H3K6 86 aa14.52□□□□□ -0.09
TPM3-202ENST00000302206 ANTXR1Q9H6X2 564 aa14.52□□□□□ -0.09
TPM3-202ENST00000302206 GREM2Q9H772 168 aa14.52□□□□□ -0.09
TPM3-202ENST00000302206 NARFQ9UHQ1 456 aa14.52□□□□□ -0.09
TPM3-202ENST00000302206 CCNL1Q9UK58 526 aaPredicted RBP14.52□□□□□ -0.09
TPM3-202ENST00000302206 NIP7Q9Y221 180 aaKnown RBP eCLIP14.52□□□□□ -0.09
TPM3-202ENST00000302206 RIC1Q4ADV7 1423 aa14.51□□□□□ -0.09
TPM3-202ENST00000302206 A0A1B0GUL7 405 aa14.51□□□□□ -0.09
TPM3-202ENST00000302206 K7ELQ4 463 aaPredicted RBP14.51□□□□□ -0.09
TPM3-202ENST00000302206 ST18O60284 1047 aa14.51□□□□□ -0.09
TPM3-202ENST00000302206 HSPA4P34932 840 aa14.51□□□□□ -0.09
TPM3-202ENST00000302206 SLC16A10Q8TF71 515 aa14.51□□□□□ -0.09
TPM3-202ENST00000302206 QSER1Q2KHR3 1735 aa14.5□□□□□ -0.09
TPM3-202ENST00000302206 CWC27Q6UX04 472 aaKnown RBP14.5□□□□□ -0.09
TPM3-202ENST00000302206 NEUROD6Q96NK8 337 aa14.5□□□□□ -0.09
TPM3-202ENST00000302206 FSD1Q9BTV5 496 aa14.5□□□□□ -0.09
TPM3-202ENST00000302206 C4BP0C0L5 1744 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 COL24A1Q17RW2 1714 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 MROH5Q6ZUA9 1318 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 GRIN3BO60391 1043 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 MCM2P49736 904 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 CCDC152Q4G0S7 254 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 LDHAL6AQ6ZMR3 332 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 KCNB2Q92953 911 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 ZNF512BQ96KM6 892 aaPredicted RBP14.49□□□□□ -0.09
TPM3-202ENST00000302206 IL25Q9H293 177 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 LRRC4BQ9NT99 713 aa14.49□□□□□ -0.09
TPM3-202ENST00000302206 RTCBQ9Y3I0 505 aaKnown RBP14.49□□□□□ -0.09
TPM3-202ENST00000302206 MED23Q9ULK4 1368 aa14.48□□□□□ -0.09
TPM3-202ENST00000302206 TIMM10P62072 90 aa14.48□□□□□ -0.09
TPM3-202ENST00000302206 NMIQ13287 307 aaPredicted RBP14.48□□□□□ -0.09
TPM3-202ENST00000302206 METTL24Q5JXM2 366 aa14.48□□□□□ -0.09
TPM3-202ENST00000302206 CCDC158Q5M9N0 1113 aa14.48□□□□□ -0.09
TPM3-202ENST00000302206 SLC10A5Q5PT55 438 aa14.48□□□□□ -0.09
TPM3-202ENST00000302206 VGLL2Q8N8G2 317 aa14.48□□□□□ -0.09
TPM3-202ENST00000302206 KBTBD3Q8NAB2 608 aa14.48□□□□□ -0.09
TPM3-202ENST00000302206 CNNM1Q9NRU3 951 aa14.48□□□□□ -0.09
TPM3-202ENST00000302206 CIZ1Q9ULV3 898 aaPredicted RBP14.48□□□□□ -0.09
TPM3-202ENST00000302206 ARAP2Q8WZ64 1704 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 GNPATO15228 680 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 HCLS1P14317 486 aaPredicted RBP14.47□□□□□ -0.09
TPM3-202ENST00000302206 DDIT3P35638 169 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 KCNQ4P56696 695 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 SF3B3Q15393 1217 aaKnown RBP14.47□□□□□ -0.09
TPM3-202ENST00000302206 ATP2B3Q16720 1220 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 SLC27A3Q5K4L6 730 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 XAGE2Q96GT9 111 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 CCDC85AQ96PX6 553 aaPredicted RBP14.47□□□□□ -0.09
TPM3-202ENST00000302206 NYXQ9GZU5 481 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 BCL2L12Q9HB09 334 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 PAG1Q9NWQ8 432 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 CHMP5Q9NZZ3 219 aa14.47□□□□□ -0.09
TPM3-202ENST00000302206 CCDC171Q6TFL3 1326 aa14.46□□□□□ -0.09
TPM3-202ENST00000302206 ZPR1O75312 459 aa14.46□□□□□ -0.09
TPM3-202ENST00000302206 PDE8BO95263 885 aa14.46□□□□□ -0.09
TPM3-202ENST00000302206 CD2BP2O95400 341 aaKnown RBP14.46□□□□□ -0.09
TPM3-202ENST00000302206 IFIT1P09914 478 aaKnown RBP14.46□□□□□ -0.09
TPM3-202ENST00000302206 HSPA6P17066 643 aa14.46□□□□□ -0.09
TPM3-202ENST00000302206 LRRFIP1Q32MZ4 808 aaKnown RBP14.46□□□□□ -0.09
TPM3-202ENST00000302206 TTC39AQ5SRH9 613 aa14.45□□□□□ -0.1
TPM3-202ENST00000302206 GORABQ5T7V8 394 aa14.45□□□□□ -0.1
TPM3-202ENST00000302206 NLGN2Q8NFZ4 835 aa14.45□□□□□ -0.1
TPM3-202ENST00000302206 MAP4K1Q92918 833 aa14.45□□□□□ -0.1
TPM3-202ENST00000302206 FAM227BQ96M60 508 aa14.45□□□□□ -0.1
TPM3-202ENST00000302206 DNAJC2Q99543 621 aaKnown RBP14.45□□□□□ -0.1
TPM3-202ENST00000302206 SLKQ9H2G2 1235 aaPredicted RBP14.45□□□□□ -0.1
TPM3-202ENST00000302206 GPBP1L1Q9HC44 474 aaPredicted RBP14.45□□□□□ -0.1
TPM3-202ENST00000302206 PALD1Q9ULE6 856 aa14.45□□□□□ -0.1
TPM3-202ENST00000302206 C4AP0C0L4 1744 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 A0A0D9SFI3 127 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 FGFR2P21802 821 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 NECTIN1Q15223 517 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 PUM3Q15397 648 aaKnown RBP14.44□□□□□ -0.1
TPM3-202ENST00000302206 USPL1Q5W0Q7 1092 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 TBC1D9BQ66K14 1250 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 LPIN2Q92539 896 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 ARHGEF1Q92888 912 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms