RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 CUL4AQ13619 759 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 CPLX2Q6PUV4 134 aaKnown RBP13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 MNS1Q8NEH6 495 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 C8orf76Q96K31 380 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 GJB4Q9NTQ9 266 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 COL9A3Q14050 684 aaPredicted RBP13.28□□□□□ -0.28
ATP1A3-201ENST00000302102 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
ATP1A3-201ENST00000302102 AKAP4Q5JQC9 854 aa13.28□□□□□ -0.28
ATP1A3-201ENST00000302102 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
ATP1A3-201ENST00000302102 CPLX3Q8WVH0 158 aa13.28□□□□□ -0.28
ATP1A3-201ENST00000302102 ZFP91Q96JP5 570 aaPredicted RBP13.28□□□□□ -0.28
ATP1A3-201ENST00000302102 ATP10DQ9P241 1426 aa13.27□□□□□ -0.28
ATP1A3-201ENST00000302102 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.28
ATP1A3-201ENST00000302102 SPECC1Q5M775 1068 aa13.27□□□□□ -0.28
ATP1A3-201ENST00000302102 ZNF396Q96N95 335 aaPredicted RBP13.27□□□□□ -0.28
ATP1A3-201ENST00000302102 GPHNQ9NQX3 736 aaPredicted RBP13.27□□□□□ -0.28
ATP1A3-201ENST00000302102 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.28
ATP1A3-201ENST00000302102 SHPRHQ149N8 1683 aa13.27□□□□□ -0.28
ATP1A3-201ENST00000302102 A1BGP04217 495 aa13.27□□□□□ -0.29
ATP1A3-201ENST00000302102 MCM5P33992 734 aa13.27□□□□□ -0.29
ATP1A3-201ENST00000302102 LEO1Q8WVC0 666 aaPredicted RBP13.27□□□□□ -0.29
ATP1A3-201ENST00000302102 KLF18A0A0U1RQI7 1052 aa13.27□□□□□ -0.29
ATP1A3-201ENST00000302102 GIGYF1O75420 1035 aaPredicted RBP13.27□□□□□ -0.29
ATP1A3-201ENST00000302102 KRT32Q14532 448 aa13.27□□□□□ -0.29
ATP1A3-201ENST00000302102 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.29
ATP1A3-201ENST00000302102 NAT10Q9H0A0 1025 aaKnown RBP13.27□□□□□ -0.29
ATP1A3-201ENST00000302102 NPHP3Q7Z494 1330 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 IP6K1Q92551 441 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 ZNF500O60304 480 aaPredicted RBP13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 SASH1O94885 1247 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 RPS6KB1P23443 525 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 ABCF2Q9UG63 623 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 EPHA10Q5JZY3 1008 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 ZNF790Q6PG37 636 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 MYL10Q9BUA6 226 aa13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 DDX19AQ9NUU7 478 aaKnown RBP13.26□□□□□ -0.29
ATP1A3-201ENST00000302102 TTC41PQ6P2S7 1318 aa13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 ADAMTS2O95450 1211 aa13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 MTERF4Q7Z6M4 381 aaKnown RBP13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 FAM89AQ96GI7 184 aa13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 STAP2Q9UGK3 403 aa13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 LMTK3Q96Q04 1460 aa13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 POLR3GO15318 223 aaPredicted RBP13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 UVSSAQ2YD98 709 aa13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 MCMDC2Q4G0Z9 681 aa13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 BRINP3Q76B58 766 aa13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 URI1O94763 535 aaPredicted RBP13.25□□□□□ -0.29
ATP1A3-201ENST00000302102 IGSF1Q8N6C5 1336 aa13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 MINDY4BA8MYZ0 360 aa13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 SFPQP23246 707 aaKnown RBP eCLIP13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 CEP135Q66GS9 1140 aa13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 ZKSCAN3Q9BRR0 538 aa13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 CGNQ9P2M7 1197 aaKnown RBP13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 DBNLQ9UJU6 430 aaKnown RBP13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 AATKQ6ZMQ8 1374 aa13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 RGS12O14924 1447 aa13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 SETD1AO15047 1707 aaKnown RBP13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 PI16Q6UXB8 463 aa13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 PAG1Q9NWQ8 432 aa13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.24□□□□□ -0.29
ATP1A3-201ENST00000302102 TNNI3KQ59H18 835 aa13.23□□□□□ -0.29
ATP1A3-201ENST00000302102 FPGT-TNNI3KV9GXZ4 949 aa13.23□□□□□ -0.29
ATP1A3-201ENST00000302102 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
ATP1A3-201ENST00000302102 RAD21O60216 631 aa13.23□□□□□ -0.29
ATP1A3-201ENST00000302102 ALDH1L1O75891 902 aa13.23□□□□□ -0.29
ATP1A3-201ENST00000302102 TPM3P06753 285 aa13.23□□□□□ -0.29
ATP1A3-201ENST00000302102 GCKRQ14397 625 aa13.23□□□□□ -0.29
ATP1A3-201ENST00000302102 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
ATP1A3-201ENST00000302102 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 ZNF213O14771 459 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 SNRPA1P09661 255 aaKnown RBP13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 LDHAL6AQ6ZMR3 332 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 VPS37DQ86XT2 251 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 IFNKQ9P0W0 207 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 BICDL1Q6ZP65 573 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 MYRIPQ8NFW9 859 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 ANO10Q9NW15 660 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 PDE4CQ08493 712 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 GOLGA8FQ08AF8 430 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 GOLGA8DPQ0D2H9 430 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 CDC42BPGQ6DT37 1551 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 PDLIM2Q96JY6 352 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
ATP1A3-201ENST00000302102 CYP21A2P08686 494 aa13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 LRRC24Q50LG9 513 aa13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 TTLL7Q6ZT98 887 aa13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 CMTR1Q8N1G2 835 aaKnown RBP13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 PHKBQ93100 1093 aa13.21□□□□□ -0.29
ATP1A3-201ENST00000302102 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms