RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 MAGEC2Q9UBF1 373 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-201ENST00000301981 TERF1P54274 439 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 JMYQ8N9B5 988 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 IL17REQ8NFR9 667 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 IPO4Q8TEX9 1081 aaKnown RBP8.91□□□□□ -0.98
LRRC28-201ENST00000301981 MAST1Q9Y2H9 1570 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 ZNF75DP51815 510 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 IKQ13123 557 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-201ENST00000301981 DHX58Q96C10 678 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 PBRM1Q86U86 1689 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 PRC1O43663 620 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 KRT222Q8N1A0 295 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 BRMS1Q9HCU9 246 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 NPATQ14207 1427 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 ASXL2Q76L83 1435 aa8.91□□□□□ -0.98
LRRC28-201ENST00000301981 YTHDC2Q9H6S0 1430 aaKnown RBP8.91□□□□□ -0.98
LRRC28-201ENST00000301981 HOXC9P31274 260 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 HSPA4P34932 840 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 EPS15P42566 896 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 ANAPC15P60006 121 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 MCMDC2Q4G0Z9 681 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 LDHAL6AQ6ZMR3 332 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 SMARCE1Q969G3 411 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 C10orf67Q8IYJ2 551 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 PLCD4Q9BRC7 762 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 TRMT112Q9UI30 125 aaKnown RBP8.9□□□□□ -0.98
LRRC28-201ENST00000301981 CEP170Q5SW79 1584 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 ZBTB22O15209 634 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 RPS6KB1P23443 525 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 CCT6AP40227 531 aaKnown RBP8.9□□□□□ -0.98
LRRC28-201ENST00000301981 ZNF827Q17R98 1081 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 ZNF589Q86UQ0 364 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-201ENST00000301981 MRPS27Q92552 414 aaKnown RBP8.9□□□□□ -0.98
LRRC28-201ENST00000301981 AK7Q96M32 723 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 HYPKQ9NX55 129 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 MTMR6Q9Y217 621 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 KDM5DQ9BY66 1539 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 CBFA2T2O43439 604 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 ERCC6LQ2NKX8 1250 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 KSR2Q6VAB6 950 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 SEPT11Q9NVA2 429 aaKnown RBP8.9□□□□□ -0.98
LRRC28-201ENST00000301981 PAG1Q9NWQ8 432 aa8.9□□□□□ -0.98
LRRC28-201ENST00000301981 EIF4G3O43432 1585 aaKnown RBP8.9□□□□□ -0.99
LRRC28-201ENST00000301981 ABCA5Q8WWZ7 1642 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 XBP1P17861 261 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 CCDC181Q5TID7 509 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 NBPF6Q5VWK0 638 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 ZSCAN25Q6NSZ9 544 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 CERS3Q8IU89 383 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 NBPF4Q96M43 638 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 DESI2Q9BSY9 194 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 CARD6Q9BX69 1037 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 BCCIPQ9P287 314 aaKnown RBP eCLIP8.9□□□□□ -0.99
LRRC28-201ENST00000301981 RSPH14Q9UHP6 348 aa8.9□□□□□ -0.99
LRRC28-201ENST00000301981 ATP10AO60312 1499 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 IARSP41252 1262 aaKnown RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 IFIT5Q13325 482 aaKnown RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 ATP2B3Q16720 1220 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 CCDC24Q8N4L8 307 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 EAF2Q96CJ1 260 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 IL25Q9H293 177 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 ZNF518AQ6AHZ1 1483 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 TOM1O60784 492 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 INTS4Q96HW7 963 aaKnown RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 ZNF215Q9UL58 517 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 SETQ01105 290 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 SSRP1Q08945 709 aaKnown RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 JAKMIP3Q5VZ66 844 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 FAM89AQ96GI7 184 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 GPHNQ9NQX3 736 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 LRRIQ1Q96JM4 1722 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 RAD50Q92878 1312 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 SPTLC2O15270 562 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 SLC9C2Q5TAH2 1124 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 VPS18Q9P253 973 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 CTNNA3Q9UI47 895 aa8.89□□□□□ -0.99
LRRC28-201ENST00000301981 SEC31AO94979 1220 aaKnown RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 SLU7O95391 586 aaKnown RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 ADKP55263 362 aaKnown RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 C11orf57Q6ZUT1 292 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 THEMISQ8N1K5 641 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-201ENST00000301981 CDK5RAP3Q96JB5 506 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 PSMB7Q99436 277 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 B4E1Z4 1266 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 KIF5CO60282 957 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 RNASE9P60153 205 aaKnown RBP8.88□□□□□ -0.99
LRRC28-201ENST00000301981 PNOCQ13519 176 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 EPC1Q9H2F5 836 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 CWC15Q9P013 229 aaKnown RBP8.88□□□□□ -0.99
LRRC28-201ENST00000301981 SAMD9LQ8IVG5 1584 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 AK9Q5TCS8 1911 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 KDM5AP29375 1690 aaKnown RBP8.88□□□□□ -0.99
LRRC28-201ENST00000301981 KRT18P05783 430 aaKnown RBP8.88□□□□□ -0.99
LRRC28-201ENST00000301981 ZFYVE27Q5T4F4 411 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 PAXBP1Q9Y5B6 917 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 GYS2P54840 703 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 NEK11Q8NG66 645 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 KCNJ14Q9UNX9 436 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 SHANK2Q9UPX8 1470 aa8.88□□□□□ -0.99
LRRC28-201ENST00000301981 PRDM1O75626 825 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms