RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CCDC85AQ96PX6 553 aaPredicted RBP15.3■□□□□ 0.04
HIF3A-204ENST00000300862 FGD1P98174 961 aa15.29■□□□□ 0.04
HIF3A-204ENST00000300862 KBTBD3Q8NAB2 608 aa15.29■□□□□ 0.04
HIF3A-204ENST00000300862 ZCRB1Q8TBF4 217 aaKnown RBP15.29■□□□□ 0.04
HIF3A-204ENST00000300862 PUS3Q9BZE2 481 aaKnown RBP15.29■□□□□ 0.04
HIF3A-204ENST00000300862 TTC12Q9H892 705 aaPredicted RBP15.29■□□□□ 0.04
HIF3A-204ENST00000300862 CWC25Q9NXE8 425 aaPredicted RBP15.29■□□□□ 0.04
HIF3A-204ENST00000300862 AP5Z1O43299 807 aa15.29■□□□□ 0.04
HIF3A-204ENST00000300862 UVSSAQ2YD98 709 aa15.29■□□□□ 0.04
HIF3A-204ENST00000300862 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
HIF3A-204ENST00000300862 KRT32Q14532 448 aa15.28■□□□□ 0.04
HIF3A-204ENST00000300862 C17orf53Q8N3J3 647 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-204ENST00000300862 GTF3C6Q969F1 213 aa15.28■□□□□ 0.04
HIF3A-204ENST00000300862 PAG1Q9NWQ8 432 aa15.28■□□□□ 0.04
HIF3A-204ENST00000300862 ARFGEF2Q9Y6D5 1785 aa15.28■□□□□ 0.04
HIF3A-204ENST00000300862 KDM4AO75164 1064 aa15.28■□□□□ 0.04
HIF3A-204ENST00000300862 CKAP2LQ8IYA6 745 aa15.28■□□□□ 0.04
HIF3A-204ENST00000300862 DYNC1I1O14576 645 aa15.27■□□□□ 0.04
HIF3A-204ENST00000300862 SPATA32Q96LK8 384 aa15.27■□□□□ 0.04
HIF3A-204ENST00000300862 ALDH8A1Q9H2A2 487 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-204ENST00000300862 STRN4Q9NRL3 753 aa15.27■□□□□ 0.04
HIF3A-204ENST00000300862 PRDM4Q9UKN5 801 aa15.27■□□□□ 0.04
HIF3A-204ENST00000300862 SCRN1Q12765 414 aa15.27■□□□□ 0.03
HIF3A-204ENST00000300862 CHST3Q7LGC8 479 aa15.27■□□□□ 0.03
HIF3A-204ENST00000300862 DACT1Q9NYF0 836 aa15.27■□□□□ 0.03
HIF3A-204ENST00000300862 NAP1L2Q9ULW6 460 aaPredicted RBP15.27■□□□□ 0.03
HIF3A-204ENST00000300862 GOLGA6L4A6NEF3 574 aa15.26■□□□□ 0.03
HIF3A-204ENST00000300862 CEBPZQ03701 1054 aaKnown RBP15.26■□□□□ 0.03
HIF3A-204ENST00000300862 SASS6Q6UVJ0 657 aa15.26■□□□□ 0.03
HIF3A-204ENST00000300862 STRCP1A6NGW2 1772 aa15.26■□□□□ 0.03
HIF3A-204ENST00000300862 LEO1Q8WVC0 666 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-204ENST00000300862 A0A1B0GUL7 405 aa15.25■□□□□ 0.03
HIF3A-204ENST00000300862 CCT2P78371 535 aaKnown RBP15.25■□□□□ 0.03
HIF3A-204ENST00000300862 APOBRQ0VD83 1088 aa15.25■□□□□ 0.03
HIF3A-204ENST00000300862 BRINP3Q76B58 766 aa15.25■□□□□ 0.03
HIF3A-204ENST00000300862 NUP62CLQ9H1M0 184 aa15.25■□□□□ 0.03
HIF3A-204ENST00000300862 PCDH11XQ9BZA7 1347 aa15.25■□□□□ 0.03
HIF3A-204ENST00000300862 PCDH11YQ9BZA8 1340 aa15.25■□□□□ 0.03
HIF3A-204ENST00000300862 H3BQV1 296 aa15.25■□□□□ 0.03
HIF3A-204ENST00000300862 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
HIF3A-204ENST00000300862 IFFO2Q5TF58 517 aa15.25■□□□□ 0.03
HIF3A-204ENST00000300862 ARID3AQ99856 593 aa15.25■□□□□ 0.03
HIF3A-204ENST00000300862 GLI3P10071 1580 aa15.24■□□□□ 0.03
HIF3A-204ENST00000300862 WDR17Q8IZU2 1322 aa15.24■□□□□ 0.03
HIF3A-204ENST00000300862 EYA2O00167 538 aa15.24■□□□□ 0.03
HIF3A-204ENST00000300862 IFIT1P09914 478 aaKnown RBP15.24■□□□□ 0.03
HIF3A-204ENST00000300862 CCDC192P0DO97 292 aa15.24■□□□□ 0.03
HIF3A-204ENST00000300862 IL15P40933 162 aaPredicted RBP15.24■□□□□ 0.03
HIF3A-204ENST00000300862 KIAA2012Q0VF49 1180 aa15.24■□□□□ 0.03
HIF3A-204ENST00000300862 TTLL5Q6EMB2 1281 aa15.24■□□□□ 0.03
HIF3A-204ENST00000300862 SPC24Q8NBT2 197 aa15.24■□□□□ 0.03
HIF3A-204ENST00000300862 PGBD1Q96JS3 809 aa15.24■□□□□ 0.03
HIF3A-204ENST00000300862 NCOA5Q9HCD5 579 aaKnown RBP15.24■□□□□ 0.03
HIF3A-204ENST00000300862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.24■□□□□ 0.03
HIF3A-204ENST00000300862 MAP3K11Q16584 847 aa15.24■□□□□ 0.03
HIF3A-204ENST00000300862 SCAND2PQ9GZW5 306 aaPredicted RBP15.24■□□□□ 0.03
HIF3A-204ENST00000300862 CPDO75976 1380 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 ELP1O95163 1332 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 SH3TC1Q8TE82 1336 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 NR1I2O75469 434 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 HSPD1P10809 573 aaKnown RBP15.23■□□□□ 0.03
HIF3A-204ENST00000300862 ADORA1P30542 326 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 HSP90AB3PQ58FF7 597 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 LUZP1Q86V48 1076 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 FTOQ9C0B1 505 aaKnown RBP eCLIP15.23■□□□□ 0.03
HIF3A-204ENST00000300862 TNMDQ9H2S6 317 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 TYRO3Q06418 890 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 RESTQ13127 1097 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 DHX32Q7L7V1 743 aaKnown RBP15.23■□□□□ 0.03
HIF3A-204ENST00000300862 CCDC191Q8NCU4 936 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 BICD2Q8TD16 824 aa15.23■□□□□ 0.03
HIF3A-204ENST00000300862 PKD1L3Q7Z443 1732 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 MAST3O60307 1309 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 M0R2C6 588 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 ZMYM1Q5SVZ6 1142 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 SYNE4Q8N205 404 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 FAM89AQ96GI7 184 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 MRVI1Q9Y6F6 885 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 ERVV-2B6SEH9 535 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 CTDNEP1O95476 244 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 GUCY1B3Q02153 619 aa15.22■□□□□ 0.03
HIF3A-204ENST00000300862 DNTTIP2Q5QJE6 756 aaKnown RBP15.22■□□□□ 0.03
HIF3A-204ENST00000300862 GPHNQ9NQX3 736 aaPredicted RBP15.22■□□□□ 0.03
HIF3A-204ENST00000300862 RFX7Q2KHR2 1363 aa15.21■□□□□ 0.03
HIF3A-204ENST00000300862 E7EWF7 191 aa15.21■□□□□ 0.03
HIF3A-204ENST00000300862 IL2RBP14784 551 aa15.21■□□□□ 0.03
HIF3A-204ENST00000300862 OSBP2Q969R2 916 aa15.21■□□□□ 0.03
HIF3A-204ENST00000300862 HELLSQ9NRZ9 838 aa15.21■□□□□ 0.03
HIF3A-204ENST00000300862 DCCP43146 1447 aa15.21■□□□□ 0.03
HIF3A-204ENST00000300862 PALLDQ8WX93 1383 aa15.21■□□□□ 0.02
HIF3A-204ENST00000300862 HAND2P61296 217 aa15.21■□□□□ 0.02
HIF3A-204ENST00000300862 MTERF4Q7Z6M4 381 aaKnown RBP15.21■□□□□ 0.02
HIF3A-204ENST00000300862 NSUN7Q8NE18 718 aaKnown RBP15.21■□□□□ 0.02
HIF3A-204ENST00000300862 CEP126Q9P2H0 1117 aa15.21■□□□□ 0.02
HIF3A-204ENST00000300862 PTPDC1A2A3K4 754 aa15.2■□□□□ 0.02
HIF3A-204ENST00000300862 RNF113AO15541 343 aaKnown RBP15.2■□□□□ 0.02
HIF3A-204ENST00000300862 SCARF1Q14162 830 aa15.2■□□□□ 0.02
HIF3A-204ENST00000300862 CCDC57Q2TAC2 916 aa15.2■□□□□ 0.02
HIF3A-204ENST00000300862 ANO6Q4KMQ2 910 aa15.2■□□□□ 0.02
HIF3A-204ENST00000300862 GORABQ5T7V8 394 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms